RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 IGHV3-73A0A0B4J1V6 119 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 C11orf86A6NJI1 115 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 H7C423 109 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 GIG44P09565 113 aaPredicted RBP3.48□□□□□ -1.85
SRP54-211ENST00000556445 NMUP48645 174 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 HSD52Q0P140 79 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 PRADC1Q9BSG0 188 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 NACAE9PAV3 2078 aa3.48□□□□□ -1.85
SRP54-211ENST00000556445 C2CD3Q4AC94 2353 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 MXRA5Q9NR99 2828 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 TRGV4A0A0C4DH28 118 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 P0DMU3 169 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 FAM231AP0DMU4 169 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 FAM231CP0DMU5 169 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 MIFP14174 115 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 HINT1P49773 126 aaPredicted RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 RPL39P62891 51 aaKnown RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 Q6ZTI0 123 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 C3orf56Q8N813 242 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 OR5A1Q8NGJ0 315 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 CHAC1Q9BUX1 264 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 WFDC10AQ9H1F0 79 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 SND1-IT1Q9HBX3 110 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 FN1P02751 2386 aaKnown RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 HECTD1Q9ULT8 2610 aa3.47□□□□□ -1.85
SRP54-211ENST00000556445 ASH1LQ9NR48 2969 aaKnown RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 MAP1AP78559 2803 aaPredicted RBP3.47□□□□□ -1.85
SRP54-211ENST00000556445 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
SRP54-211ENST00000556445 UBE2D3P61077 147 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 UBE2D2P62837 147 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 MPV17L2Q567V2 206 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 BVES-AS1Q5T3Y7 98 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 LINC00612Q8N6U2 182 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 SLC25A29Q8N8R3 303 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 AMELXQ99217 191 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 CHCHD7Q9BUK0 85 aa3.46□□□□□ -1.86
SRP54-211ENST00000556445 GCN1Q92616 2671 aaKnown RBP3.46□□□□□ -1.86
SRP54-211ENST00000556445 IGLV4-69A0A075B6H9 119 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 TRBV25-1A0A075B6N4 114 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 MYMXA0A1B0GTQ4 84 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 A8MUN3 132 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 H3BRM9 83 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 LST1O00453 97 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 UBE2L6O14933 153 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 LEPROTO15243 131 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 PRM2P04554 102 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 AMMECR1LQ6DCA0 310 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 C2orf91Q6ZV80 131 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 Q8N377 158 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 CAMK2N2Q96S95 79 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 PRO0255Q9UI72 69 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
SRP54-211ENST00000556445 IGKV2D-26A0A0A0MRZ7 120 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 A0A0J9YWU9 116 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 ZNF815PA8K554 130 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 SPART-AS1P0CW21 52 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 LGALS3P17931 250 aaKnown RBP3.44□□□□□ -1.86
SRP54-211ENST00000556445 Q6Q795 121 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 PCP2Q8IVA1 136 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 F8P00451 2351 aa3.44□□□□□ -1.86
SRP54-211ENST00000556445 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 TMEM223A0PJW6 202 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 J3QQQ9 107 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 COX7A2LO14548 114 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 CCL25O15444 150 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 DEFB130BP0DP73 79 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 DEFB130AP0DP74 79 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 ZNF22P17026 224 aaPredicted RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 CXCL5P42830 114 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 DEFB135Q30KP9 77 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 HRCT1Q6UXD1 115 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 CEND1Q8N111 149 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 ATP6V0E2Q8NHE4 81 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 C11orf68Q9H3H3 251 aaKnown RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
SRP54-211ENST00000556445 SETXQ7Z333 2677 aaKnown RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 NSD1Q96L73 2696 aaPredicted RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 SETD2Q9BYW2 2564 aaPredicted RBP3.43□□□□□ -1.86
SRP54-211ENST00000556445 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 TRBV6-8A0A0A6YYG3 113 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 C9JAW5 83 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 K7ERU9 68 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 LINC00694P0DN24 101 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 UBE2D1P51668 147 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 Q6ZUT4 128 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 DEFB104AQ8WTQ1 72 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 COPS9Q8WXC6 57 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 CARD19Q96LW7 228 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 ERG28Q9UKR5 140 aa3.42□□□□□ -1.86
SRP54-211ENST00000556445 IGHV1-58A0A0C4DH39 117 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms