RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
RCCD1-205ENST00000556333 PANO1I0J062 215 aa12.91□□□□□ -0.34
RCCD1-205ENST00000556333 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
RCCD1-205ENST00000556333 CIRBP-AS1Q8TBR5 109 aa12.91□□□□□ -0.34
RCCD1-205ENST00000556333 MRPL35Q9NZE8 188 aaKnown RBP12.91□□□□□ -0.34
RCCD1-205ENST00000556333 A0A096LNI7 61 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.34
RCCD1-205ENST00000556333 RPL18AQ02543 176 aaKnown RBP12.9□□□□□ -0.34
RCCD1-205ENST00000556333 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 C10orf25Q5T742 122 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 Q8N1X5 172 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 HERC1Q15751 4861 aa12.9□□□□□ -0.34
RCCD1-205ENST00000556333 C11orf86A6NJI1 115 aa12.89□□□□□ -0.35
RCCD1-205ENST00000556333 GAGE2BQ13066 116 aa12.89□□□□□ -0.35
RCCD1-205ENST00000556333 RNF151Q2KHN1 245 aa12.89□□□□□ -0.35
RCCD1-205ENST00000556333 SPACA4Q8TDM5 124 aa12.88□□□□□ -0.35
RCCD1-205ENST00000556333 COX7B2Q8TF08 81 aa12.88□□□□□ -0.35
RCCD1-205ENST00000556333 C6orf48Q9UBA6 75 aa12.88□□□□□ -0.35
RCCD1-205ENST00000556333 APOBP04114 4563 aaKnown RBP12.88□□□□□ -0.35
RCCD1-205ENST00000556333 F8VRH5 84 aa12.87□□□□□ -0.35
RCCD1-205ENST00000556333 CIRBPQ14011 172 aaKnown RBP12.87□□□□□ -0.35
RCCD1-205ENST00000556333 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
RCCD1-205ENST00000556333 LINC00474Q9P2X8 69 aa12.86□□□□□ -0.35
RCCD1-205ENST00000556333 A0A087WYN8 130 aa12.85□□□□□ -0.35
RCCD1-205ENST00000556333 EPM2AB3EWF7 344 aa12.85□□□□□ -0.35
RCCD1-205ENST00000556333 FAM229AH3BQW9 127 aa12.85□□□□□ -0.35
RCCD1-205ENST00000556333 CXCL5P42830 114 aa12.85□□□□□ -0.35
RCCD1-205ENST00000556333 PTTG1IPP53801 180 aa12.85□□□□□ -0.35
RCCD1-205ENST00000556333 STPG4Q8N801 248 aa12.84□□□□□ -0.35
RCCD1-205ENST00000556333 MAP1LC3CQ9BXW4 147 aa12.84□□□□□ -0.35
RCCD1-205ENST00000556333 ODF1Q14990 250 aa12.83□□□□□ -0.36
RCCD1-205ENST00000556333 Q5VSD8 79 aa12.83□□□□□ -0.36
RCCD1-205ENST00000556333 LINC00528Q8N1L1 170 aa12.83□□□□□ -0.36
RCCD1-205ENST00000556333 DNAH8Q96JB1 4490 aa12.82□□□□□ -0.36
RCCD1-205ENST00000556333 C9orf116Q5BN46 136 aaPredicted RBP12.82□□□□□ -0.36
RCCD1-205ENST00000556333 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
RCCD1-205ENST00000556333 GAGE2EQ4V326 116 aa12.8□□□□□ -0.36
RCCD1-205ENST00000556333 COA6Q5JTJ3 125 aaKnown RBP12.8□□□□□ -0.36
RCCD1-205ENST00000556333 GAGE2DQ9UEU5 116 aa12.8□□□□□ -0.36
RCCD1-205ENST00000556333 IGLV5-39A0A0G2JS06 123 aa12.79□□□□□ -0.36
RCCD1-205ENST00000556333 Q6ZRP5 223 aa12.79□□□□□ -0.36
RCCD1-205ENST00000556333 PMCHL2Q9BQD1 86 aa12.79□□□□□ -0.36
RCCD1-205ENST00000556333 PLAC8Q9NZF1 115 aa12.79□□□□□ -0.36
RCCD1-205ENST00000556333 TMEM223A0PJW6 202 aa12.78□□□□□ -0.36
RCCD1-205ENST00000556333 DMBT1Q9UGM3 2413 aaPredicted RBP12.77□□□□□ -0.37
RCCD1-205ENST00000556333 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
RCCD1-205ENST00000556333 PLNP26678 52 aa12.77□□□□□ -0.37
RCCD1-205ENST00000556333 DPM2O94777 84 aa12.76□□□□□ -0.37
RCCD1-205ENST00000556333 PLA2G1BP04054 148 aaKnown RBP12.76□□□□□ -0.37
RCCD1-205ENST00000556333 IGKCP01834 107 aa12.75□□□□□ -0.37
RCCD1-205ENST00000556333 SYS1-DBNDD2H3BUS1 97 aa12.74□□□□□ -0.37
RCCD1-205ENST00000556333 C7orf33Q8WU49 177 aa12.73□□□□□ -0.37
RCCD1-205ENST00000556333 S100A6P06703 90 aa12.72□□□□□ -0.37
RCCD1-205ENST00000556333 ZNF625Q96I27 306 aaPredicted RBP12.72□□□□□ -0.37
RCCD1-205ENST00000556333 A0A1W2PNN7 141 aa12.71□□□□□ -0.37
RCCD1-205ENST00000556333 KRTDAPP60985 99 aa12.71□□□□□ -0.37
RCCD1-205ENST00000556333 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.37
RCCD1-205ENST00000556333 HERVK_113P61574 105 aa12.71□□□□□ -0.37
RCCD1-205ENST00000556333 C3orf79P0CE67 100 aa12.7□□□□□ -0.38
RCCD1-205ENST00000556333 PFN2P35080 140 aa12.7□□□□□ -0.38
RCCD1-205ENST00000556333 SFTA2Q6UW10 78 aa12.7□□□□□ -0.38
RCCD1-205ENST00000556333 PET117Q6UWS5 81 aa12.7□□□□□ -0.38
RCCD1-205ENST00000556333 FAM19A5Q7Z5A7 132 aaPredicted RBP12.7□□□□□ -0.38
RCCD1-205ENST00000556333 FAM168BA1KXE4 195 aa12.69□□□□□ -0.38
RCCD1-205ENST00000556333 S100A2P29034 98 aa12.69□□□□□ -0.38
RCCD1-205ENST00000556333 XAGE1AQ9HD64 81 aa12.69□□□□□ -0.38
RCCD1-205ENST00000556333 C9orf129Q5T035 196 aaKnown RBP12.68□□□□□ -0.38
RCCD1-205ENST00000556333 LINC01545Q5VT33 79 aa12.67□□□□□ -0.38
RCCD1-205ENST00000556333 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
RCCD1-205ENST00000556333 LEPROTO15243 131 aa12.66□□□□□ -0.38
RCCD1-205ENST00000556333 PLEKHB2Q96CS7 222 aa12.66□□□□□ -0.38
RCCD1-205ENST00000556333 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
RCCD1-205ENST00000556333 PHF5AQ7RTV0 110 aaKnown RBP12.65□□□□□ -0.38
RCCD1-205ENST00000556333 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
RCCD1-205ENST00000556333 C20orf202A1L168 122 aa12.64□□□□□ -0.39
RCCD1-205ENST00000556333 NDUFA12Q9UI09 145 aa12.64□□□□□ -0.39
RCCD1-205ENST00000556333 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
RCCD1-205ENST00000556333 COX17Q14061 63 aa12.63□□□□□ -0.39
RCCD1-205ENST00000556333 MEIG1Q5JSS6 88 aa12.63□□□□□ -0.39
RCCD1-205ENST00000556333 A0A0U1RRA0 63 aa12.62□□□□□ -0.39
RCCD1-205ENST00000556333 MYMXA0A1B0GTQ4 84 aa12.62□□□□□ -0.39
RCCD1-205ENST00000556333 J3QQQ9 107 aa12.62□□□□□ -0.39
RCCD1-205ENST00000556333 M0QXV9 152 aa12.62□□□□□ -0.39
RCCD1-205ENST00000556333 LGALS3P17931 250 aaKnown RBP12.62□□□□□ -0.39
RCCD1-205ENST00000556333 LINC00158P58513 81 aa12.62□□□□□ -0.39
RCCD1-205ENST00000556333 TSPEAR-AS2P59090 65 aa12.61□□□□□ -0.39
RCCD1-205ENST00000556333 SNRPEP62304 92 aaKnown RBP12.61□□□□□ -0.39
RCCD1-205ENST00000556333 HERV-K104P63124 156 aa12.61□□□□□ -0.39
RCCD1-205ENST00000556333 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
RCCD1-205ENST00000556333 KRTAP10-4P60372 401 aaPredicted RBP12.59□□□□□ -0.39
RCCD1-205ENST00000556333 SERTAD4-AS1Q5TG53 156 aa12.59□□□□□ -0.39
RCCD1-205ENST00000556333 E9PLD3 99 aa12.58□□□□□ -0.4
RCCD1-205ENST00000556333 UBE2BP63146 152 aa12.58□□□□□ -0.4
RCCD1-205ENST00000556333 KRTAP7-1Q8IUC3 87 aa12.58□□□□□ -0.4
RCCD1-205ENST00000556333 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
RCCD1-205ENST00000556333 NMUP48645 174 aa12.57□□□□□ -0.4
RCCD1-205ENST00000556333 SND1-IT1Q9HBX3 110 aa12.57□□□□□ -0.4
RCCD1-205ENST00000556333 LINC00587B1AMM8 73 aa12.56□□□□□ -0.4
RCCD1-205ENST00000556333 PRR3P79522 188 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms