RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 TIMM17AQ99595 171 aa10.92□□□□□ -0.66
NPC2-208ENST00000556009 NPSP0C0P6 89 aa10.91□□□□□ -0.66
NPC2-208ENST00000556009 NDUFA6P56556 154 aa10.91□□□□□ -0.66
NPC2-208ENST00000556009 RNF151Q2KHN1 245 aa10.91□□□□□ -0.66
NPC2-208ENST00000556009 PDZD11Q5EBL8 140 aa10.91□□□□□ -0.66
NPC2-208ENST00000556009 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.66
NPC2-208ENST00000556009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.9□□□□□ -0.66
NPC2-208ENST00000556009 Q6ZN92 141 aa10.9□□□□□ -0.66
NPC2-208ENST00000556009 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
NPC2-208ENST00000556009 COA6Q5JTJ3 125 aaKnown RBP10.89□□□□□ -0.67
NPC2-208ENST00000556009 VCX2Q9H322 139 aa10.89□□□□□ -0.67
NPC2-208ENST00000556009 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
NPC2-208ENST00000556009 ZC2HC1BQ5TFG8 222 aa10.88□□□□□ -0.67
NPC2-208ENST00000556009 TEX43Q6ZNM6 134 aa10.88□□□□□ -0.67
NPC2-208ENST00000556009 C5orf38Q86SI9 138 aa10.88□□□□□ -0.67
NPC2-208ENST00000556009 AMELXQ99217 191 aa10.88□□□□□ -0.67
NPC2-208ENST00000556009 IFITM10A6NMD0 228 aa10.87□□□□□ -0.67
NPC2-208ENST00000556009 F8WDY8 70 aa10.87□□□□□ -0.67
NPC2-208ENST00000556009 ATP5LO75964 103 aa10.87□□□□□ -0.67
NPC2-208ENST00000556009 OR10D4PQ8NGN7 298 aa10.87□□□□□ -0.67
NPC2-208ENST00000556009 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
NPC2-208ENST00000556009 LINC00173Q6ZV60 143 aa10.86□□□□□ -0.67
NPC2-208ENST00000556009 C2orf88Q9BSF0 95 aa10.86□□□□□ -0.67
NPC2-208ENST00000556009 SPAG11BQ08648 103 aa10.85□□□□□ -0.67
NPC2-208ENST00000556009 MRPL35Q9NZE8 188 aaKnown RBP10.85□□□□□ -0.67
NPC2-208ENST00000556009 IGHV3OR16-9A0A0B4J2B5 98 aa10.84□□□□□ -0.67
NPC2-208ENST00000556009 LEPROTL1O95214 131 aa10.84□□□□□ -0.67
NPC2-208ENST00000556009 RPL18AQ02543 176 aaKnown RBP10.84□□□□□ -0.67
NPC2-208ENST00000556009 IFI27L1Q96BM0 104 aa10.84□□□□□ -0.67
NPC2-208ENST00000556009 FABP4P15090 132 aa10.83□□□□□ -0.68
NPC2-208ENST00000556009 UBE2D1P51668 147 aa10.83□□□□□ -0.68
NPC2-208ENST00000556009 PMVKQ15126 192 aa10.83□□□□□ -0.68
NPC2-208ENST00000556009 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
NPC2-208ENST00000556009 S100A6P06703 90 aa10.82□□□□□ -0.68
NPC2-208ENST00000556009 PHF5AQ7RTV0 110 aaKnown RBP10.82□□□□□ -0.68
NPC2-208ENST00000556009 HSPB8Q9UJY1 196 aa10.82□□□□□ -0.68
NPC2-208ENST00000556009 C1orf137Q5JT78 98 aa10.81□□□□□ -0.68
NPC2-208ENST00000556009 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
NPC2-208ENST00000556009 NDUFA1O15239 70 aa10.8□□□□□ -0.68
NPC2-208ENST00000556009 TLX1NBP0CAT3 122 aa10.8□□□□□ -0.68
NPC2-208ENST00000556009 LINC00242Q5T6M2 205 aa10.8□□□□□ -0.68
NPC2-208ENST00000556009 FAM19A3Q7Z5A8 133 aa10.79□□□□□ -0.68
NPC2-208ENST00000556009 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
NPC2-208ENST00000556009 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
NPC2-208ENST00000556009 LPAP08519 4548 aa10.77□□□□□ -0.68
NPC2-208ENST00000556009 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 SEC11AP67812 179 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 C10orf25Q5T742 122 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 UNQ6190/PRO20217Q6UXQ8 127 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 HIST3H2BBQ8N257 126 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 DIRC1Q969H9 104 aa10.77□□□□□ -0.69
NPC2-208ENST00000556009 H0Y8G0 127 aa10.76□□□□□ -0.69
NPC2-208ENST00000556009 SNRPEP62304 92 aaKnown RBP10.76□□□□□ -0.69
NPC2-208ENST00000556009 MAP1LC3CQ9BXW4 147 aa10.76□□□□□ -0.69
NPC2-208ENST00000556009 GEMIN7Q9H840 131 aaKnown RBP10.76□□□□□ -0.69
NPC2-208ENST00000556009 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
NPC2-208ENST00000556009 A0A087WZ39 114 aa10.75□□□□□ -0.69
NPC2-208ENST00000556009 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
NPC2-208ENST00000556009 HERVK_113P63121 156 aa10.75□□□□□ -0.69
NPC2-208ENST00000556009 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
NPC2-208ENST00000556009 FAM168BA1KXE4 195 aa10.74□□□□□ -0.69
NPC2-208ENST00000556009 S100A2P29034 98 aa10.74□□□□□ -0.69
NPC2-208ENST00000556009 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
NPC2-208ENST00000556009 KRTAP11-1Q8IUC1 163 aa10.74□□□□□ -0.69
NPC2-208ENST00000556009 TMA7Q9Y2S6 64 aaKnown RBP10.74□□□□□ -0.69
NPC2-208ENST00000556009 C5orf52A6NGY3 159 aa10.73□□□□□ -0.69
NPC2-208ENST00000556009 H0Y9J4 135 aa10.73□□□□□ -0.69
NPC2-208ENST00000556009 IGLC3P0DOY3 106 aa10.73□□□□□ -0.69
NPC2-208ENST00000556009 KRTAP7-1Q8IUC3 87 aa10.72□□□□□ -0.69
NPC2-208ENST00000556009 LINC00469Q8N7U9 141 aa10.72□□□□□ -0.69
NPC2-208ENST00000556009 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
NPC2-208ENST00000556009 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
NPC2-208ENST00000556009 CDKN2A-AS1Q9UH64 79 aa10.72□□□□□ -0.69
NPC2-208ENST00000556009 IGLV5-45A0A087WSX0 123 aa10.71□□□□□ -0.69
NPC2-208ENST00000556009 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
NPC2-208ENST00000556009 F8VRH5 84 aa10.71□□□□□ -0.69
NPC2-208ENST00000556009 SYS1-DBNDD2H3BUS1 97 aa10.71□□□□□ -0.69
NPC2-208ENST00000556009 LINC01561Q8N1V8 128 aa10.71□□□□□ -0.69
NPC2-208ENST00000556009 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
NPC2-208ENST00000556009 C3orf79P0CE67 100 aa10.7□□□□□ -0.7
NPC2-208ENST00000556009 KRTDAPP60985 99 aa10.7□□□□□ -0.7
NPC2-208ENST00000556009 GAGE2EQ4V326 116 aa10.7□□□□□ -0.7
NPC2-208ENST00000556009 FAM19A5Q7Z5A7 132 aaPredicted RBP10.7□□□□□ -0.7
NPC2-208ENST00000556009 GAGE2DQ9UEU5 116 aa10.7□□□□□ -0.7
NPC2-208ENST00000556009 IGLV1-50A0A075B6I6 118 aa10.69□□□□□ -0.7
NPC2-208ENST00000556009 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
NPC2-208ENST00000556009 PMCHL2Q9BQD1 86 aa10.69□□□□□ -0.7
NPC2-208ENST00000556009 ZNF22P17026 224 aaPredicted RBP10.68□□□□□ -0.7
NPC2-208ENST00000556009 PET117Q6UWS5 81 aa10.68□□□□□ -0.7
NPC2-208ENST00000556009 H3BRM9 83 aa10.67□□□□□ -0.7
NPC2-208ENST00000556009 M0QXV9 152 aa10.67□□□□□ -0.7
NPC2-208ENST00000556009 KRTAP1-4P0C5Y4 121 aa10.67□□□□□ -0.7
NPC2-208ENST00000556009 TMEM170BQ5T4T1 132 aa10.67□□□□□ -0.7
NPC2-208ENST00000556009 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
NPC2-208ENST00000556009 DPM2O94777 84 aa10.66□□□□□ -0.7
NPC2-208ENST00000556009 SPINK8P0C7L1 97 aa10.66□□□□□ -0.7
NPC2-208ENST00000556009 PLNP26678 52 aa10.66□□□□□ -0.7
NPC2-208ENST00000556009 LINC01545Q5VT33 79 aa10.66□□□□□ -0.7
NPC2-208ENST00000556009 SMIM1B2RUZ4 78 aa10.65□□□□□ -0.7
NPC2-208ENST00000556009 UBE2BP63146 152 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms