RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 SMIM6P0DI80 62 aa13.31□□□□□ -0.28
FOXN3-209ENST00000555353 CNBPP62633 177 aaKnown RBP13.31□□□□□ -0.28
FOXN3-209ENST00000555353 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
FOXN3-209ENST00000555353 VAMP8Q9BV40 100 aa13.31□□□□□ -0.28
FOXN3-209ENST00000555353 RYR1P21817 5038 aa13.3□□□□□ -0.28
FOXN3-209ENST00000555353 HERC2O95714 4834 aa13.3□□□□□ -0.28
FOXN3-209ENST00000555353 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
FOXN3-209ENST00000555353 LEPROTO15243 131 aa13.3□□□□□ -0.28
FOXN3-209ENST00000555353 Q8IZM0 81 aa13.3□□□□□ -0.28
FOXN3-209ENST00000555353 GVQW2A0A096LPI5 108 aaPredicted RBP13.29□□□□□ -0.28
FOXN3-209ENST00000555353 XGP55808 180 aa13.29□□□□□ -0.28
FOXN3-209ENST00000555353 C6orf226Q5I0X4 101 aa13.29□□□□□ -0.28
FOXN3-209ENST00000555353 COX7B2Q8TF08 81 aa13.29□□□□□ -0.28
FOXN3-209ENST00000555353 HSPG2P98160 4391 aa13.29□□□□□ -0.28
FOXN3-209ENST00000555353 S100A12P80511 92 aa13.28□□□□□ -0.28
FOXN3-209ENST00000555353 C9orf163Q8N9P6 203 aa13.28□□□□□ -0.28
FOXN3-209ENST00000555353 FAM30AQ9NZY2 134 aa13.28□□□□□ -0.28
FOXN3-209ENST00000555353 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
FOXN3-209ENST00000555353 CXCL5P42830 114 aa13.27□□□□□ -0.29
FOXN3-209ENST00000555353 MAJINQ3KP22 176 aa13.27□□□□□ -0.29
FOXN3-209ENST00000555353 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.29
FOXN3-209ENST00000555353 J3QQQ9 107 aa13.26□□□□□ -0.29
FOXN3-209ENST00000555353 SLPIP03973 132 aa13.26□□□□□ -0.29
FOXN3-209ENST00000555353 CKS1BP61024 79 aa13.26□□□□□ -0.29
FOXN3-209ENST00000555353 SFTA2Q6UW10 78 aa13.26□□□□□ -0.29
FOXN3-209ENST00000555353 Q6ZSA8 131 aa13.26□□□□□ -0.29
FOXN3-209ENST00000555353 F8WDY8 70 aa13.25□□□□□ -0.29
FOXN3-209ENST00000555353 NMUP48645 174 aa13.25□□□□□ -0.29
FOXN3-209ENST00000555353 HAMPP81172 84 aa13.25□□□□□ -0.29
FOXN3-209ENST00000555353 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
FOXN3-209ENST00000555353 KIAA0087Q14695 138 aa13.24□□□□□ -0.29
FOXN3-209ENST00000555353 C2orf48Q96LS8 159 aa13.24□□□□□ -0.29
FOXN3-209ENST00000555353 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
FOXN3-209ENST00000555353 LINC00526Q96FQ7 95 aa13.23□□□□□ -0.29
FOXN3-209ENST00000555353 CAMK2N2Q96S95 79 aa13.23□□□□□ -0.29
FOXN3-209ENST00000555353 IGKV2D-26A0A0A0MRZ7 120 aa13.22□□□□□ -0.29
FOXN3-209ENST00000555353 NDUFA1O15239 70 aa13.22□□□□□ -0.29
FOXN3-209ENST00000555353 Q8N1X5 172 aa13.21□□□□□ -0.29
FOXN3-209ENST00000555353 NDUFA12Q9UI09 145 aa13.21□□□□□ -0.29
FOXN3-209ENST00000555353 MYMXA0A1B0GTQ4 84 aa13.2□□□□□ -0.3
FOXN3-209ENST00000555353 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
FOXN3-209ENST00000555353 SDIM1Q6ZPB5 146 aa13.2□□□□□ -0.3
FOXN3-209ENST00000555353 HERV-K104P63124 156 aa13.19□□□□□ -0.3
FOXN3-209ENST00000555353 SYCNQ0VAF6 134 aa13.19□□□□□ -0.3
FOXN3-209ENST00000555353 C2orf82Q6UX34 121 aa13.19□□□□□ -0.3
FOXN3-209ENST00000555353 CARD19Q96LW7 228 aa13.19□□□□□ -0.3
FOXN3-209ENST00000555353 ZNF815PA8K554 130 aa13.18□□□□□ -0.3
FOXN3-209ENST00000555353 SMR3BP02814 79 aaPredicted RBP13.17□□□□□ -0.3
FOXN3-209ENST00000555353 SCXQ7RTU7 201 aa13.17□□□□□ -0.3
FOXN3-209ENST00000555353 ZNF625Q96I27 306 aaPredicted RBP13.17□□□□□ -0.3
FOXN3-209ENST00000555353 DNAH8Q96JB1 4490 aa13.17□□□□□ -0.3
FOXN3-209ENST00000555353 C12orf57Q99622 126 aa13.16□□□□□ -0.3
FOXN3-209ENST00000555353 TRBV30A0A0K0K1B3 111 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 UNQ6190/PRO20217Q6UXQ8 127 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 PCP2Q8IVA1 136 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 KRTAP17-1Q9BYP8 105 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 COX8AP10176 69 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 Q6ZRU5 148 aa13.15□□□□□ -0.3
FOXN3-209ENST00000555353 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.15□□□□□ -0.3
FOXN3-209ENST00000555353 LINC00587B1AMM8 73 aa13.14□□□□□ -0.31
FOXN3-209ENST00000555353 CIRBP-AS1Q8TBR5 109 aa13.14□□□□□ -0.31
FOXN3-209ENST00000555353 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
FOXN3-209ENST00000555353 PKIGQ9Y2B9 76 aa13.14□□□□□ -0.31
FOXN3-209ENST00000555353 EPM2AB3EWF7 344 aa13.13□□□□□ -0.31
FOXN3-209ENST00000555353 C10orf25Q5T742 122 aa13.13□□□□□ -0.31
FOXN3-209ENST00000555353 DPH3Q96FX2 82 aa13.13□□□□□ -0.31
FOXN3-209ENST00000555353 RNF151Q2KHN1 245 aa13.12□□□□□ -0.31
FOXN3-209ENST00000555353 MEIG1Q5JSS6 88 aa13.12□□□□□ -0.31
FOXN3-209ENST00000555353 SCGB1D4Q6XE38 83 aa13.12□□□□□ -0.31
FOXN3-209ENST00000555353 LINC00518Q8N0U6 118 aa13.12□□□□□ -0.31
FOXN3-209ENST00000555353 C14orf144Q96I85 54 aa13.12□□□□□ -0.31
FOXN3-209ENST00000555353 SLC25A34Q6PIV7 304 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 KRTAP4-5Q9BYR2 181 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 C6orf48Q9UBA6 75 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 PANO1I0J062 215 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 CIRBPQ14011 172 aaKnown RBP13.11□□□□□ -0.31
FOXN3-209ENST00000555353 Q5VSD8 79 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 BOD1L2Q8IYS8 172 aa13.11□□□□□ -0.31
FOXN3-209ENST00000555353 DLEU1O43261 78 aa13.1□□□□□ -0.31
FOXN3-209ENST00000555353 ERG28Q9UKR5 140 aa13.1□□□□□ -0.31
FOXN3-209ENST00000555353 IGKV2-24A0A0C4DH68 120 aa13.09□□□□□ -0.31
FOXN3-209ENST00000555353 A0A0J9YXY3 114 aa13.09□□□□□ -0.31
FOXN3-209ENST00000555353 COX17Q14061 63 aa13.08□□□□□ -0.32
FOXN3-209ENST00000555353 SPACA4Q8TDM5 124 aa13.07□□□□□ -0.32
FOXN3-209ENST00000555353 PFN2P35080 140 aa13.07□□□□□ -0.32
FOXN3-209ENST00000555353 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
FOXN3-209ENST00000555353 FAT1Q14517 4588 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 A0A096LNI7 61 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 LOC107984640A0A0U1RRK4 108 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 LINC00158P58513 81 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 C9orf116Q5BN46 136 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-209ENST00000555353 LINC00474Q9P2X8 69 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 UQCR10Q9UDW1 63 aa13.06□□□□□ -0.32
FOXN3-209ENST00000555353 TIMM17BO60830 172 aa13.05□□□□□ -0.32
FOXN3-209ENST00000555353 A0A087WYN8 130 aa13.04□□□□□ -0.32
FOXN3-209ENST00000555353 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
FOXN3-209ENST00000555353 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
FOXN3-209ENST00000555353 TSTD3H0UI37 97 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms