RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 IFITM2Q01629 132 aa2.59□□□□□ -1.99
VTI1B-203ENST00000554636 COX6A2Q02221 97 aa2.59□□□□□ -1.99
VTI1B-203ENST00000554636 SS18Q15532 418 aa2.59□□□□□ -1.99
VTI1B-203ENST00000554636 CLLU1Q5K131 121 aa2.59□□□□□ -1.99
VTI1B-203ENST00000554636 CARD19Q96LW7 228 aa2.59□□□□□ -1.99
VTI1B-203ENST00000554636 LRP2P98164 4655 aa2.59□□□□□ -2
VTI1B-203ENST00000554636 IGLV4-69A0A075B6H9 119 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 IGKV2-24A0A0C4DH68 120 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 COX7A2LO14548 114 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 OXTP01178 125 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 RAB14P61106 215 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 MRPS36P82909 103 aaKnown RBP2.58□□□□□ -2
VTI1B-203ENST00000554636 SMAGPQ0VAQ4 97 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 MAJINQ3KP22 176 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 TMEM136Q6ZRR5 245 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 Q6ZRU5 148 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 ORMDL3Q8N138 153 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 PRELID3AQ96N28 172 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 SPANXA1Q9NS26 97 aa2.58□□□□□ -2
VTI1B-203ENST00000554636 IGLV4-3A0A075B6K6 122 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 IGHV3OR16-9A0A0B4J2B5 98 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 C1orf196B1AJZ1 125 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.57□□□□□ -2
VTI1B-203ENST00000554636 MT-ND4LP03901 98 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 MT1HL1P0DM35 61 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 KRTAP12-2P59991 146 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 PRR3P79522 188 aaKnown RBP2.57□□□□□ -2
VTI1B-203ENST00000554636 SPAG11BQ08648 103 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 SYCNQ0VAF6 134 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 UQCC3Q6UW78 93 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 C5orf38Q86SI9 138 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 Q8N8P6 123 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 C2orf48Q96LS8 159 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 MAP1LC3AQ9H492 121 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 LAMTOR2Q9Y2Q5 125 aa2.57□□□□□ -2
VTI1B-203ENST00000554636 LOC107984640A0A0U1RRK4 108 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 LOC389332A0A1B0GUA5 103 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 A0A1W2PNN7 141 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 TMEM218A2RU14 115 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 APOMO95445 188 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 IFI27P40305 119 aaPredicted RBP2.56□□□□□ -2
VTI1B-203ENST00000554636 UBE2D1P51668 147 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 LINC00173Q6ZV60 143 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 OR10D4PQ8NGN7 298 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 C7orf33Q8WU49 177 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 ORAOV1Q8WV07 137 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 CAMK2N2Q96S95 79 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 IMMP2LQ96T52 175 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 MRPL35Q9NZE8 188 aaKnown RBP2.56□□□□□ -2
VTI1B-203ENST00000554636 LINC00474Q9P2X8 69 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 C6orf48Q9UBA6 75 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 CYSLTR1Q9Y271 337 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 PKIGQ9Y2B9 76 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
VTI1B-203ENST00000554636 TRAV9-1A0A075B6T8 112 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 A0A087WZ39 114 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 A0A0J9YXV3 536 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 IGIPA6NJ69 53 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 F8WDY8 70 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 TLX1NBP0CAT3 122 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 RAB5AP20339 215 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 KIAA0087Q14695 138 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 C9orf116Q5BN46 136 aaPredicted RBP2.55□□□□□ -2
VTI1B-203ENST00000554636 LINC00242Q5T6M2 205 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 C2orf66Q6UXQ4 117 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 FAM19A3Q7Z5A8 133 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 COMMD7Q86VX2 200 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 LINC01561Q8N1V8 128 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 DPH3Q96FX2 82 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 TMEM141Q96I45 108 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 FAM218AQ96MZ4 157 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 AMELXQ99217 191 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 SEC11CQ9BY50 192 aa2.55□□□□□ -2
VTI1B-203ENST00000554636 TGIF2-C20orf24A0A0A6YYL0 155 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 LINC01546A6NGU7 62 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 K7EMI3 77 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 NDUFA1O15239 70 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 RPL18AQ02543 176 aaKnown RBP2.54□□□□□ -2
VTI1B-203ENST00000554636 SRSF9Q13242 221 aaKnown RBP eCLIP2.54□□□□□ -2
VTI1B-203ENST00000554636 ORMDL2Q53FV1 153 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 C10orf91Q5T1B1 145 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 UNQ6190/PRO20217Q6UXQ8 127 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 TEX43Q6ZNM6 134 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 PHF5AQ7RTV0 110 aaKnown RBP2.54□□□□□ -2
VTI1B-203ENST00000554636 C2orf88Q9BSF0 95 aa2.54□□□□□ -2
VTI1B-203ENST00000554636 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
VTI1B-203ENST00000554636 CARHSP1Q9Y2V2 147 aaKnown RBP2.54□□□□□ -2
VTI1B-203ENST00000554636 FAM168BA1KXE4 195 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 SPINK6Q6UWN8 80 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 Q6ZN92 141 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 KRTAP11-1Q8IUC1 163 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 TOMM6Q96B49 74 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 TIMM17AQ99595 171 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 ALKBH7Q9BT30 221 aaPredicted RBP2.53□□□□□ -2
VTI1B-203ENST00000554636 GNB1LQ9BYB4 327 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 VCX2Q9H322 139 aa2.53□□□□□ -2
VTI1B-203ENST00000554636 TRBV30A0A0K0K1B3 111 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 S100PP25815 95 aa2.52□□□□□ -2.01
VTI1B-203ENST00000554636 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms