RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 A0A096LNI7 61 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 LOC107984640A0A0U1RRK4 108 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 F8WDY8 70 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 LEPROTL1O95214 131 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 FABP4P15090 132 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 HNRNPA3P51991 378 aaKnown RBP5.5□□□□□ -1.53
ACTN1-213ENST00000554508 Q6ZRU5 148 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 OR10D4PQ8NGN7 298 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 IFI27L1Q96BM0 104 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 CAMK2N2Q96S95 79 aa5.5□□□□□ -1.53
ACTN1-213ENST00000554508 GEMIN7Q9H840 131 aaKnown RBP5.5□□□□□ -1.53
ACTN1-213ENST00000554508 IGHV3OR16-9A0A0B4J2B5 98 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 H0Y8G0 127 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 AKR1D1P51857 326 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 HERVK_113P63121 156 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 SEC11AP67812 179 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 HSPB8Q9UJY1 196 aa5.49□□□□□ -1.53
ACTN1-213ENST00000554508 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
ACTN1-213ENST00000554508 PTTG1IPP53801 180 aa5.48□□□□□ -1.53
ACTN1-213ENST00000554508 SERTAD4-AS1Q5TG53 156 aa5.48□□□□□ -1.53
ACTN1-213ENST00000554508 FAM19A3Q7Z5A8 133 aa5.48□□□□□ -1.53
ACTN1-213ENST00000554508 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
ACTN1-213ENST00000554508 CHTOPQ9Y3Y2 248 aaKnown RBP5.48□□□□□ -1.53
ACTN1-213ENST00000554508 A0A087WZ39 114 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 C5orf52A6NGY3 159 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 SPAG11BQ08648 103 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 COA6Q5JTJ3 125 aaKnown RBP5.47□□□□□ -1.53
ACTN1-213ENST00000554508 ORAOV1Q8WV07 137 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 PACRGQ96M98 296 aaPredicted RBP5.47□□□□□ -1.53
ACTN1-213ENST00000554508 MRPL35Q9NZE8 188 aaKnown RBP5.47□□□□□ -1.53
ACTN1-213ENST00000554508 CDKN2A-AS1Q9UH64 79 aa5.47□□□□□ -1.53
ACTN1-213ENST00000554508 TRAV12-1A0A0B4J245 112 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 IGLC3P0DOY3 106 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 LINC01561Q8N1V8 128 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 HIST3H2BBQ8N257 126 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 MAP1LC3CQ9BXW4 147 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 TNXBP22105 4242 aa5.46□□□□□ -1.54
ACTN1-213ENST00000554508 H3BRM9 83 aa5.45□□□□□ -1.54
ACTN1-213ENST00000554508 NDUFA1O15239 70 aa5.45□□□□□ -1.54
ACTN1-213ENST00000554508 PRR3P79522 188 aaKnown RBP5.45□□□□□ -1.54
ACTN1-213ENST00000554508 TOMM7Q9P0U1 55 aa5.45□□□□□ -1.54
ACTN1-213ENST00000554508 IGLV5-45A0A087WSX0 123 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 C11orf86A6NJI1 115 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 F8VRH5 84 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 PRSS2P07478 247 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 SPINK8P0C7L1 97 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 RPL18AQ02543 176 aaKnown RBP5.44□□□□□ -1.54
ACTN1-213ENST00000554508 TMEM170BQ5T4T1 132 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 Q6ZRP5 223 aa5.44□□□□□ -1.54
ACTN1-213ENST00000554508 A0A1W2PNN7 141 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 C20orf202A1L168 122 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 ZNF22P17026 224 aaPredicted RBP5.43□□□□□ -1.54
ACTN1-213ENST00000554508 KRTDAPP60985 99 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 ODF1Q14990 250 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
ACTN1-213ENST00000554508 C6orf226Q5I0X4 101 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 HIST1H2BLQ99880 126 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 PMCHL2Q9BQD1 86 aa5.43□□□□□ -1.54
ACTN1-213ENST00000554508 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 SYS1-DBNDD2H3BUS1 97 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 SCGB1D1O95968 90 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 CKS1BP61024 79 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 KIAA0087Q14695 138 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 SPINK6Q6UWN8 80 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 UNQ6190/PRO20217Q6UXQ8 127 aa5.42□□□□□ -1.54
ACTN1-213ENST00000554508 LOC105371267A0A1B0GV96 52 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 DPM2O94777 84 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 IGKCP01834 107 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 C3orf79P0CE67 100 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 MT1HL1P0DM35 61 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 PLNP26678 52 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 SRSF9Q13242 221 aaKnown RBP eCLIP5.41□□□□□ -1.54
ACTN1-213ENST00000554508 C10orf25Q5T742 122 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 C2orf82Q6UX34 121 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 Q8IZM0 81 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 COX7B2Q8TF08 81 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 C6orf48Q9UBA6 75 aa5.41□□□□□ -1.54
ACTN1-213ENST00000554508 REG3GQ6UW15 175 aa5.4□□□□□ -1.54
ACTN1-213ENST00000554508 PET117Q6UWS5 81 aa5.4□□□□□ -1.54
ACTN1-213ENST00000554508 LINC01600Q96MT4 127 aa5.4□□□□□ -1.54
ACTN1-213ENST00000554508 IGLV5-39A0A0G2JS06 123 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 TMEM223A0PJW6 202 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 NDUFC2-KCTD14E9PQ53 114 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 S100A12P80511 92 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 GAGE2EQ4V326 116 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 PHF5AQ7RTV0 110 aaKnown RBP5.39□□□□□ -1.55
ACTN1-213ENST00000554508 GAGE2DQ9UEU5 116 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
ACTN1-213ENST00000554508 HSBP1L1C9JCN9 74 aa5.38□□□□□ -1.55
ACTN1-213ENST00000554508 CXCL5P42830 114 aa5.38□□□□□ -1.55
ACTN1-213ENST00000554508 HERVK_113P61574 105 aa5.38□□□□□ -1.55
ACTN1-213ENST00000554508 LINC01545Q5VT33 79 aa5.38□□□□□ -1.55
ACTN1-213ENST00000554508 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
ACTN1-213ENST00000554508 SMIM6P0DI80 62 aa5.37□□□□□ -1.55
ACTN1-213ENST00000554508 C1orf137Q5JT78 98 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms