RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 Q6ZN92 141 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 TEX43Q6ZNM6 134 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 SPATA12Q7Z6I5 190 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 Q9HAA7 133 aa4.17□□□□□ -1.74
SCFD1-212ENST00000554486 IGLV4-69A0A075B6H9 119 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 TRAV8-3A0A0A6YYJ7 113 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 TRAV12-1A0A0B4J245 112 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 A0A0J9YXV3 536 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 H0Y8G0 127 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 CCL25O15444 150 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 CRPP02741 224 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 COX6A2Q02221 97 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 MIAQ16674 131 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 Q6ZRN7 208 aaPredicted RBP4.16□□□□□ -1.74
SCFD1-212ENST00000554486 FAM19A3Q7Z5A8 133 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 C2orf88Q9BSF0 95 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 MAP1LC3CQ9BXW4 147 aa4.16□□□□□ -1.74
SCFD1-212ENST00000554486 IGKV2D-24A0A075B6R9 120 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 SYS1-DBNDD2H3BUS1 97 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 XCL1P47992 114 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 KRTDAPP60985 99 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 SS18Q15532 418 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 LINC00242Q5T6M2 205 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 OR10D4PQ8NGN7 298 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 CHCHD10Q8WYQ3 142 aaPredicted RBP4.15□□□□□ -1.75
SCFD1-212ENST00000554486 PMCHL2Q9BQD1 86 aa4.15□□□□□ -1.75
SCFD1-212ENST00000554486 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
SCFD1-212ENST00000554486 CHTOPQ9Y3Y2 248 aaKnown RBP4.15□□□□□ -1.75
SCFD1-212ENST00000554486 IGHV3OR16-9A0A0B4J2B5 98 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 TINCRA0A1B0GVN0 87 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 C11orf86A6NJI1 115 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 F8VRH5 84 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 IGLC3P0DOY3 106 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 LINC01545Q5VT33 79 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 CD164L2Q6UWJ8 174 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 PET117Q6UWS5 81 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 C6orf223Q8N319 242 aa4.14□□□□□ -1.75
SCFD1-212ENST00000554486 ZNF22P17026 224 aaPredicted RBP4.13□□□□□ -1.75
SCFD1-212ENST00000554486 SEC11AP67812 179 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 ADAMTSL4-AS1Q5T5F5 129 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 C5orf38Q86SI9 138 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 RMI2Q96E14 147 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 GEMIN7Q9H840 131 aaKnown RBP4.13□□□□□ -1.75
SCFD1-212ENST00000554486 CDKN2A-AS1Q9UH64 79 aa4.13□□□□□ -1.75
SCFD1-212ENST00000554486 DNAH11Q96DT5 4516 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 FAT2Q9NYQ8 4349 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 A0A087WZ39 114 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 LOC105371267A0A1B0GV96 52 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 LRCOL1A6NCL2 159 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 RTL8CO15255 209 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 CDK2AP2O75956 126 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 DPM2O94777 84 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 HERVK_113P63121 156 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 WFDC2Q14508 124 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 LINC00469Q8N7U9 141 aa4.12□□□□□ -1.75
SCFD1-212ENST00000554486 COX7A2LO14548 114 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 IGKCP01834 107 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 PLNP26678 52 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 TMEM170BQ5T4T1 132 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
SCFD1-212ENST00000554486 PKD1P98161 4303 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 RYR3Q15413 4870 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 IGHV3-64A0A075B6Q5 118 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 IGHV1-58A0A0C4DH39 117 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 C20orf202A1L168 122 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 LECT2O14960 151 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 PSCAO43653 123 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 SPINK8P0C7L1 97 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 JOSD1Q15040 202 aaPredicted RBP4.1□□□□□ -1.75
SCFD1-212ENST00000554486 ATOH7Q8N100 152 aa4.1□□□□□ -1.75
SCFD1-212ENST00000554486 A0A087WTM6 91 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 H3BRM9 83 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 AKR1D1P51857 326 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 KIAA0087Q14695 138 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 PYY3Q5JQD4 70 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 Q6ZRP5 223 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 KRTAP7-1Q8IUC3 87 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 ORAOV1Q8WV07 137 aa4.09□□□□□ -1.75
SCFD1-212ENST00000554486 GVQW2A0A096LPI5 108 aaPredicted RBP4.08□□□□□ -1.76
SCFD1-212ENST00000554486 APOMO95445 188 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 SPAG11BQ08648 103 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 MAJINQ3KP22 176 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 HIGD2BQ4VC39 106 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 C14orf177Q52M58 125 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 LINC00526Q96FQ7 95 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 FAM218AQ96MZ4 157 aa4.08□□□□□ -1.76
SCFD1-212ENST00000554486 PKHD1P08F94 4074 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 IGKV2D-26A0A0A0MRZ7 120 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 E9PLD3 99 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 LEPROTO15243 131 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 Q8IZM0 81 aa4.07□□□□□ -1.76
SCFD1-212ENST00000554486 COX7B2Q8TF08 81 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms