RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.85□□□□□ -0.51
PSEN1-210ENST00000554131 IGKCP01834 107 aa11.85□□□□□ -0.51
PSEN1-210ENST00000554131 UNQ6190/PRO20217Q6UXQ8 127 aa11.85□□□□□ -0.51
PSEN1-210ENST00000554131 SDIM1Q6ZPB5 146 aa11.85□□□□□ -0.51
PSEN1-210ENST00000554131 COX7B2Q8TF08 81 aa11.85□□□□□ -0.51
PSEN1-210ENST00000554131 TOMM7Q9P0U1 55 aa11.85□□□□□ -0.51
PSEN1-210ENST00000554131 NDUFA1O15239 70 aa11.83□□□□□ -0.52
PSEN1-210ENST00000554131 Q6ZSA8 131 aa11.83□□□□□ -0.52
PSEN1-210ENST00000554131 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
PSEN1-210ENST00000554131 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
PSEN1-210ENST00000554131 PRSS2P07478 247 aa11.82□□□□□ -0.52
PSEN1-210ENST00000554131 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
PSEN1-210ENST00000554131 C6orf226Q5I0X4 101 aa11.82□□□□□ -0.52
PSEN1-210ENST00000554131 TMA7Q9Y2S6 64 aaKnown RBP11.82□□□□□ -0.52
PSEN1-210ENST00000554131 PANO1I0J062 215 aa11.8□□□□□ -0.52
PSEN1-210ENST00000554131 TRBV30A0A0K0K1B3 111 aa11.79□□□□□ -0.52
PSEN1-210ENST00000554131 CXCL5P42830 114 aa11.79□□□□□ -0.52
PSEN1-210ENST00000554131 RYR1P21817 5038 aa11.79□□□□□ -0.52
PSEN1-210ENST00000554131 KIAA1109Q2LD37 5005 aa11.78□□□□□ -0.52
PSEN1-210ENST00000554131 TSPEAR-AS2P59090 65 aa11.78□□□□□ -0.52
PSEN1-210ENST00000554131 CKS1BP61024 79 aa11.78□□□□□ -0.52
PSEN1-210ENST00000554131 CIRBPQ14011 172 aaKnown RBP11.77□□□□□ -0.53
PSEN1-210ENST00000554131 C9orf116Q5BN46 136 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-210ENST00000554131 ZNF625Q96I27 306 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-210ENST00000554131 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.77□□□□□ -0.53
PSEN1-210ENST00000554131 LEPROTO15243 131 aa11.76□□□□□ -0.53
PSEN1-210ENST00000554131 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
PSEN1-210ENST00000554131 A0A096LNI7 61 aa11.75□□□□□ -0.53
PSEN1-210ENST00000554131 C20orf202A1L168 122 aa11.75□□□□□ -0.53
PSEN1-210ENST00000554131 CHTF8P0CG12 524 aa11.75□□□□□ -0.53
PSEN1-210ENST00000554131 XGP55808 180 aa11.75□□□□□ -0.53
PSEN1-210ENST00000554131 STPG4Q8N801 248 aa11.75□□□□□ -0.53
PSEN1-210ENST00000554131 LOC107984640A0A0U1RRK4 108 aa11.74□□□□□ -0.53
PSEN1-210ENST00000554131 E9PLD3 99 aa11.74□□□□□ -0.53
PSEN1-210ENST00000554131 HSPG2P98160 4391 aa11.74□□□□□ -0.53
PSEN1-210ENST00000554131 CDK2AP2O75956 126 aa11.73□□□□□ -0.53
PSEN1-210ENST00000554131 HERVK_113P61574 105 aa11.73□□□□□ -0.53
PSEN1-210ENST00000554131 Q6ZRP5 223 aa11.73□□□□□ -0.53
PSEN1-210ENST00000554131 ATOH7Q8N100 152 aa11.73□□□□□ -0.53
PSEN1-210ENST00000554131 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
PSEN1-210ENST00000554131 PTTG1IPP53801 180 aa11.72□□□□□ -0.53
PSEN1-210ENST00000554131 PLEKHB2Q96CS7 222 aa11.72□□□□□ -0.53
PSEN1-210ENST00000554131 IGKV2D-26A0A0A0MRZ7 120 aa11.71□□□□□ -0.53
PSEN1-210ENST00000554131 NDUFC2-KCTD14E9PQ53 114 aa11.71□□□□□ -0.53
PSEN1-210ENST00000554131 J3QQQ9 107 aa11.71□□□□□ -0.53
PSEN1-210ENST00000554131 HAMPP81172 84 aa11.71□□□□□ -0.53
PSEN1-210ENST00000554131 SFTA2Q6UW10 78 aa11.7□□□□□ -0.54
PSEN1-210ENST00000554131 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
PSEN1-210ENST00000554131 IGKV2-24A0A0C4DH68 120 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 AKR1D1P51857 326 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
PSEN1-210ENST00000554131 GAGE2BQ13066 116 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 ANKRD39Q53RE8 183 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 NDUFA12Q9UI09 145 aa11.69□□□□□ -0.54
PSEN1-210ENST00000554131 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
PSEN1-210ENST00000554131 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
PSEN1-210ENST00000554131 EPM2AB3EWF7 344 aa11.67□□□□□ -0.54
PSEN1-210ENST00000554131 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
PSEN1-210ENST00000554131 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
PSEN1-210ENST00000554131 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
PSEN1-210ENST00000554131 A0A087WYN8 130 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 MYMXA0A1B0GTQ4 84 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 SCGB1D1O95968 90 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 LGALS3P17931 250 aaKnown RBP11.65□□□□□ -0.54
PSEN1-210ENST00000554131 NMUP48645 174 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 JOSD1Q15040 202 aaPredicted RBP11.65□□□□□ -0.54
PSEN1-210ENST00000554131 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 PLAC8Q9NZF1 115 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 LINC00474Q9P2X8 69 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
PSEN1-210ENST00000554131 HERC2O95714 4834 aa11.65□□□□□ -0.55
PSEN1-210ENST00000554131 HERV-K104P63124 156 aa11.64□□□□□ -0.55
PSEN1-210ENST00000554131 COX17Q14061 63 aa11.64□□□□□ -0.55
PSEN1-210ENST00000554131 TTTY13Q9BZ97 58 aa11.64□□□□□ -0.55
PSEN1-210ENST00000554131 A0A1W2PNN7 141 aa11.63□□□□□ -0.55
PSEN1-210ENST00000554131 PFN2P35080 140 aa11.63□□□□□ -0.55
PSEN1-210ENST00000554131 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
PSEN1-210ENST00000554131 FAT1Q14517 4588 aa11.61□□□□□ -0.55
PSEN1-210ENST00000554131 FAM168BA1KXE4 195 aa11.61□□□□□ -0.55
PSEN1-210ENST00000554131 XAGE1AQ9HD64 81 aa11.61□□□□□ -0.55
PSEN1-210ENST00000554131 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
PSEN1-210ENST00000554131 SMIM13P0DJ93 91 aa11.6□□□□□ -0.55
PSEN1-210ENST00000554131 PYY3Q5JQD4 70 aa11.6□□□□□ -0.55
PSEN1-210ENST00000554131 PCP2Q8IVA1 136 aa11.59□□□□□ -0.55
PSEN1-210ENST00000554131 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
PSEN1-210ENST00000554131 A0A0U1RRA0 63 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 ZNF815PA8K554 130 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 LINC00158P58513 81 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 MEIG1Q5JSS6 88 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 DPH3Q96FX2 82 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 LITAFQ99732 161 aa11.57□□□□□ -0.56
PSEN1-210ENST00000554131 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
PSEN1-210ENST00000554131 LINC00587B1AMM8 73 aa11.55□□□□□ -0.56
PSEN1-210ENST00000554131 HSBP1L1C9JCN9 74 aa11.55□□□□□ -0.56
PSEN1-210ENST00000554131 SMR3BP02814 79 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-210ENST00000554131 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
PSEN1-210ENST00000554131 Q8NDZ9 215 aa11.55□□□□□ -0.56
PSEN1-210ENST00000554131 PLA2G2DQ9UNK4 145 aa11.55□□□□□ -0.56
PSEN1-210ENST00000554131 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms