RNA–Protein interactions for RNA: ENST00000553727.1

SV2B-204, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-204ENST00000553727 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 C11orf86A6NJI1 115 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 ZNF22P17026 224 aaPredicted RBP9.11□□□□□ -0.95
SV2B-204ENST00000553727 GAGE2BQ13066 116 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 MAJINQ3KP22 176 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 TMEM170BQ5T4T1 132 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 Q8IZM0 81 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 Q8N1X5 172 aa9.11□□□□□ -0.95
SV2B-204ENST00000553727 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
SV2B-204ENST00000553727 RNF151Q2KHN1 245 aa9.1□□□□□ -0.95
SV2B-204ENST00000553727 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
SV2B-204ENST00000553727 RPL18AQ02543 176 aaKnown RBP9.09□□□□□ -0.95
SV2B-204ENST00000553727 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
SV2B-204ENST00000553727 COX7B2Q8TF08 81 aa9.09□□□□□ -0.95
SV2B-204ENST00000553727 F8VRH5 84 aa9.08□□□□□ -0.96
SV2B-204ENST00000553727 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
SV2B-204ENST00000553727 LINC00474Q9P2X8 69 aa9.08□□□□□ -0.96
SV2B-204ENST00000553727 A0A087WYN8 130 aa9.07□□□□□ -0.96
SV2B-204ENST00000553727 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
SV2B-204ENST00000553727 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
SV2B-204ENST00000553727 ODF1Q14990 250 aa9.07□□□□□ -0.96
SV2B-204ENST00000553727 MAP1LC3CQ9BXW4 147 aa9.07□□□□□ -0.96
SV2B-204ENST00000553727 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
SV2B-204ENST00000553727 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
SV2B-204ENST00000553727 CXCL5P42830 114 aa9.06□□□□□ -0.96
SV2B-204ENST00000553727 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
SV2B-204ENST00000553727 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
SV2B-204ENST00000553727 STPG4Q8N801 248 aa9.06□□□□□ -0.96
SV2B-204ENST00000553727 GAGE2EQ4V326 116 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
SV2B-204ENST00000553727 Q5VSD8 79 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 GAGE2DQ9UEU5 116 aa9.05□□□□□ -0.96
SV2B-204ENST00000553727 IGLV5-39A0A0G2JS06 123 aa9.04□□□□□ -0.96
SV2B-204ENST00000553727 TLX1NBP0CAT3 122 aa9.04□□□□□ -0.96
SV2B-204ENST00000553727 Q6ZRP5 223 aa9.04□□□□□ -0.96
SV2B-204ENST00000553727 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
SV2B-204ENST00000553727 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
SV2B-204ENST00000553727 HSPG2P98160 4391 aa9.03□□□□□ -0.96
SV2B-204ENST00000553727 RYR1P21817 5038 aa9.03□□□□□ -0.96
SV2B-204ENST00000553727 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
SV2B-204ENST00000553727 SYS1-DBNDD2H3BUS1 97 aa9.02□□□□□ -0.97
SV2B-204ENST00000553727 DPM2O94777 84 aa9.02□□□□□ -0.97
SV2B-204ENST00000553727 PLNP26678 52 aa9.02□□□□□ -0.97
SV2B-204ENST00000553727 A0A1W2PNN7 141 aa9.01□□□□□ -0.97
SV2B-204ENST00000553727 DNAH8Q96JB1 4490 aa9.01□□□□□ -0.97
SV2B-204ENST00000553727 IGKCP01834 107 aa9□□□□□ -0.97
SV2B-204ENST00000553727 PLA2G1BP04054 148 aaKnown RBP9□□□□□ -0.97
SV2B-204ENST00000553727 KRTDAPP60985 99 aa8.99□□□□□ -0.97
SV2B-204ENST00000553727 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
SV2B-204ENST00000553727 S100A6P06703 90 aa8.98□□□□□ -0.97
SV2B-204ENST00000553727 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
SV2B-204ENST00000553727 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
SV2B-204ENST00000553727 C7orf33Q8WU49 177 aa8.98□□□□□ -0.97
SV2B-204ENST00000553727 FAM168BA1KXE4 195 aa8.97□□□□□ -0.97
SV2B-204ENST00000553727 PFN2P35080 140 aa8.97□□□□□ -0.97
SV2B-204ENST00000553727 RPL37AP61513 92 aaKnown RBP8.97□□□□□ -0.97
SV2B-204ENST00000553727 HERVK_113P61574 105 aa8.97□□□□□ -0.97
SV2B-204ENST00000553727 XAGE1AQ9HD64 81 aa8.97□□□□□ -0.97
SV2B-204ENST00000553727 S100A2P29034 98 aa8.96□□□□□ -0.98
SV2B-204ENST00000553727 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.98
SV2B-204ENST00000553727 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
SV2B-204ENST00000553727 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
SV2B-204ENST00000553727 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
SV2B-204ENST00000553727 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
SV2B-204ENST00000553727 LEPROTO15243 131 aa8.94□□□□□ -0.98
SV2B-204ENST00000553727 HIST3H2BBQ8N257 126 aa8.94□□□□□ -0.98
SV2B-204ENST00000553727 INAFM2P0DMQ5 153 aa8.93□□□□□ -0.98
SV2B-204ENST00000553727 PHF5AQ7RTV0 110 aaKnown RBP8.93□□□□□ -0.98
SV2B-204ENST00000553727 PLEKHB2Q96CS7 222 aa8.93□□□□□ -0.98
SV2B-204ENST00000553727 NDUFA12Q9UI09 145 aa8.93□□□□□ -0.98
SV2B-204ENST00000553727 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
SV2B-204ENST00000553727 C20orf202A1L168 122 aa8.92□□□□□ -0.98
SV2B-204ENST00000553727 LINC00158P58513 81 aa8.92□□□□□ -0.98
SV2B-204ENST00000553727 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
SV2B-204ENST00000553727 MYMXA0A1B0GTQ4 84 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 J3QQQ9 107 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 LGALS3P17931 250 aaKnown RBP8.91□□□□□ -0.98
SV2B-204ENST00000553727 TSPEAR-AS2P59090 65 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 COX17Q14061 63 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 MEIG1Q5JSS6 88 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 KRTAP7-1Q8IUC3 87 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 HIST1H2BLQ99880 126 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 FAT1Q14517 4588 aa8.91□□□□□ -0.98
SV2B-204ENST00000553727 M0QXV9 152 aa8.9□□□□□ -0.98
SV2B-204ENST00000553727 KRTAP10-4P60372 401 aaPredicted RBP8.9□□□□□ -0.98
SV2B-204ENST00000553727 HERV-K104P63124 156 aa8.9□□□□□ -0.98
SV2B-204ENST00000553727 SERTAD4-AS1Q5TG53 156 aa8.9□□□□□ -0.98
SV2B-204ENST00000553727 E9PLD3 99 aa8.89□□□□□ -0.99
SV2B-204ENST00000553727 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
SV2B-204ENST00000553727 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
SV2B-204ENST00000553727 ATOH7Q8N100 152 aa8.88□□□□□ -0.99
SV2B-204ENST00000553727 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
SV2B-204ENST00000553727 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
SV2B-204ENST00000553727 NMUP48645 174 aa8.87□□□□□ -0.99
SV2B-204ENST00000553727 UBE2BP63146 152 aa8.87□□□□□ -0.99
SV2B-204ENST00000553727 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
SV2B-204ENST00000553727 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms