RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 UNQ6190/PRO20217Q6UXQ8 127 aa6.4□□□□□ -1.38
CHD8-204ENST00000553622 Q8N814 137 aa6.4□□□□□ -1.38
CHD8-204ENST00000553622 NTN5Q8WTR8 489 aaPredicted RBP6.4□□□□□ -1.38
CHD8-204ENST00000553622 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
CHD8-204ENST00000553622 CARD19Q96LW7 228 aa6.4□□□□□ -1.38
CHD8-204ENST00000553622 FUSP35637 526 aaKnown RBP eCLIP6.39□□□□□ -1.39
CHD8-204ENST00000553622 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
CHD8-204ENST00000553622 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
CHD8-204ENST00000553622 Q6ZRU5 148 aa6.39□□□□□ -1.39
CHD8-204ENST00000553622 C2orf48Q96LS8 159 aa6.39□□□□□ -1.39
CHD8-204ENST00000553622 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.38□□□□□ -1.39
CHD8-204ENST00000553622 A0A0U1RRA0 63 aa6.38□□□□□ -1.39
CHD8-204ENST00000553622 COX8AP10176 69 aa6.38□□□□□ -1.39
CHD8-204ENST00000553622 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
CHD8-204ENST00000553622 PRO1933Q9H354 126 aa6.38□□□□□ -1.39
CHD8-204ENST00000553622 TP73-AS1Q9UF72 201 aa6.38□□□□□ -1.39
CHD8-204ENST00000553622 F8WDY8 70 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 SLPIP03973 132 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 PFN2P35080 140 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
CHD8-204ENST00000553622 SFTA2Q6UW10 78 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 LINC00336Q6ZUF6 198 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 LINC00518Q8N0U6 118 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 C6orf48Q9UBA6 75 aa6.37□□□□□ -1.39
CHD8-204ENST00000553622 IGLV5-52A0A0A0MRZ9 124 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 LINC00158P58513 81 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 HERV-K104P63124 156 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 SLC25A34Q6PIV7 304 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
CHD8-204ENST00000553622 HYDINQ4G0P3 5121 aa6.35□□□□□ -1.39
CHD8-204ENST00000553622 A0A0J9YXY3 114 aa6.35□□□□□ -1.39
CHD8-204ENST00000553622 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
CHD8-204ENST00000553622 RPL18AQ02543 176 aaKnown RBP6.35□□□□□ -1.39
CHD8-204ENST00000553622 CIRBPQ14011 172 aaKnown RBP6.35□□□□□ -1.39
CHD8-204ENST00000553622 LINC01620Q4KN68 170 aa6.35□□□□□ -1.39
CHD8-204ENST00000553622 CNBPP62633 177 aaKnown RBP6.34□□□□□ -1.39
CHD8-204ENST00000553622 BOD1L2Q8IYS8 172 aa6.34□□□□□ -1.39
CHD8-204ENST00000553622 UQCR10Q9UDW1 63 aa6.34□□□□□ -1.39
CHD8-204ENST00000553622 DNAH10Q8IVF4 4471 aa6.34□□□□□ -1.39
CHD8-204ENST00000553622 LINC00587B1AMM8 73 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 TSTD3H0UI37 97 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 KRTAP10-2P60368 255 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 DAND5Q8N907 189 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
CHD8-204ENST00000553622 LOC107984640A0A0U1RRK4 108 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 TMEM238C9JI98 176 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 DLEU1O43261 78 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 NPC2P61916 151 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 RNF151Q2KHN1 245 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 SACSQ9NZJ4 4579 aa6.32□□□□□ -1.4
CHD8-204ENST00000553622 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 HNRNPA3P51991 378 aaKnown RBP6.31□□□□□ -1.4
CHD8-204ENST00000553622 SRSF9Q13242 221 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHD8-204ENST00000553622 COX17Q14061 63 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 C9orf163Q8N9P6 203 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 FRAS1Q86XX4 4008 aa6.31□□□□□ -1.4
CHD8-204ENST00000553622 NDUFC2-KCTD14E9PQ53 114 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 TIMM17BO60830 172 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 ADAMTSL4-AS1Q5T5F5 129 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 HIST1H4GQ99525 98 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 PKIGQ9Y2B9 76 aa6.3□□□□□ -1.4
CHD8-204ENST00000553622 GCSHP23434 173 aa6.29□□□□□ -1.4
CHD8-204ENST00000553622 Q6ZRP5 223 aa6.29□□□□□ -1.4
CHD8-204ENST00000553622 C2orf91Q6ZV80 131 aa6.29□□□□□ -1.4
CHD8-204ENST00000553622 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
CHD8-204ENST00000553622 SND1-IT1Q9HBX3 110 aa6.29□□□□□ -1.4
CHD8-204ENST00000553622 A0A096LNI7 61 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 CHTF8P0CG12 524 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 LITAFQ99732 161 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 HIGD1BQ9P298 99 aa6.28□□□□□ -1.4
CHD8-204ENST00000553622 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
CHD8-204ENST00000553622 RYR2Q92736 4967 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 C16orf90A8MZG2 172 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 SPANXDQ9BXN6 97 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
CHD8-204ENST00000553622 SPANXCQ9NY87 97 aa6.27□□□□□ -1.41
CHD8-204ENST00000553622 A0A1B0GVY2 172 aa6.26□□□□□ -1.41
CHD8-204ENST00000553622 MUSTN1Q8IVN3 82 aa6.26□□□□□ -1.41
CHD8-204ENST00000553622 LINC00308Q8TCZ7 52 aa6.26□□□□□ -1.41
CHD8-204ENST00000553622 COPS9Q8WXC6 57 aa6.26□□□□□ -1.41
CHD8-204ENST00000553622 DNAH2Q9P225 4427 aa6.26□□□□□ -1.41
CHD8-204ENST00000553622 DDTP30046 118 aa6.25□□□□□ -1.41
CHD8-204ENST00000553622 CTAG1AP78358 180 aa6.25□□□□□ -1.41
CHD8-204ENST00000553622 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
CHD8-204ENST00000553622 SOSTDC1Q6X4U4 206 aa6.25□□□□□ -1.41
CHD8-204ENST00000553622 Q6ZVH6 145 aa6.25□□□□□ -1.41
CHD8-204ENST00000553622 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
CHD8-204ENST00000553622 DNAH17Q9UFH2 4485 aa6.25□□□□□ -1.41
CHD8-204ENST00000553622 FAM168BA1KXE4 195 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms