RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 RYR2Q92736 4967 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
ATXN3-222ENST00000553570 FRAS1Q86XX4 4008 aa3.03□□□□□ -1.93
ATXN3-222ENST00000553570 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.02□□□□□ -1.93
ATXN3-222ENST00000553570 C1orf196B1AJZ1 125 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 G0S2P27469 103 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 RAB5BP61020 215 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 Q6ZN92 141 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 Q6ZUT4 128 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 VCX2Q9H322 139 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
ATXN3-222ENST00000553570 CYSLTR1Q9Y271 337 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 LAMTOR2Q9Y2Q5 125 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 UBE2D4Q9Y2X8 147 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 DNAH6Q9C0G6 4158 aa3.02□□□□□ -1.93
ATXN3-222ENST00000553570 COX7A2LO14548 114 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 APOMO95445 188 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 RPL32P62910 135 aaKnown RBP3.01□□□□□ -1.93
ATXN3-222ENST00000553570 CXCL6P80162 114 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 KRTAP26-1Q6PEX3 210 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 TEX43Q6ZNM6 134 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 MRPL52Q86TS9 123 aaKnown RBP3.01□□□□□ -1.93
ATXN3-222ENST00000553570 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 C2orf88Q9BSF0 95 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
ATXN3-222ENST00000553570 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 IGHV1-58A0A0C4DH39 117 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 IGKV2-24A0A0C4DH68 120 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 MT-ND6P03923 174 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 PMCHL1Q16048 86 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 LINC01561Q8N1V8 128 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 GEMIN7Q9H840 131 aaKnown RBP3□□□□□ -1.93
ATXN3-222ENST00000553570 TOMM7Q9P0U1 55 aa3□□□□□ -1.93
ATXN3-222ENST00000553570 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
ATXN3-222ENST00000553570 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 A0A0J9YXV3 536 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 COLCA2A8K830 154 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 S100A6P06703 90 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 LINC00614P0C842 121 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 MRPS36P82909 103 aaKnown RBP2.99□□□□□ -1.93
ATXN3-222ENST00000553570 COX6A2Q02221 97 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 SYCNQ0VAF6 134 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 MAJINQ3KP22 176 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 BAGE3Q86Y29 109 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 C15orf56Q8N910 161 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 C9orf163Q8N9P6 203 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 ORAOV1Q8WV07 137 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 CAMK2N2Q96S95 79 aa2.99□□□□□ -1.93
ATXN3-222ENST00000553570 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 H0Y8G0 127 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-222ENST00000553570 K7EMI3 77 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 CHTF8P0CG12 524 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 SPAG11BQ08648 103 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 C18orf32Q8TCD1 76 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 TOMM6Q96B49 74 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 CARD19Q96LW7 228 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 PACRGQ96M98 296 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-222ENST00000553570 YPEL4Q96NS1 127 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 PKD1P98161 4303 aa2.98□□□□□ -1.93
ATXN3-222ENST00000553570 GVQW2A0A096LPI5 108 aaPredicted RBP2.97□□□□□ -1.93
ATXN3-222ENST00000553570 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 E9PLD3 99 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 TRGC2P03986 189 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 CKS1BP61024 79 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 RPL18AQ02543 176 aaKnown RBP2.97□□□□□ -1.93
ATXN3-222ENST00000553570 PMVKQ15126 192 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 Q5VSD8 79 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 SDIM1Q6ZPB5 146 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 Q6ZRU5 148 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 FAM19A2Q8N3H0 131 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 LINC00469Q8N7U9 141 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 CHAC1Q9BUX1 264 aa2.97□□□□□ -1.93
ATXN3-222ENST00000553570 EPPK1P58107 5090 aaKnown RBP2.96□□□□□ -1.93
ATXN3-222ENST00000553570 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 NDUFA1O15239 70 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 HSBP1O75506 76 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 HBDP02042 147 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 FABP4P15090 132 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 UBE2D1P51668 147 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ATXN3-222ENST00000553570 HERVK_113P63121 156 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 SEC11AP67812 179 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 AMELXQ99217 191 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
ATXN3-222ENST00000553570 CST9LQ9H4G1 147 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms