RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 F8VRH5 84 aa15.03■□□□□ -0
TDP1-205ENST00000553527 MRPL35Q9NZE8 188 aaKnown RBP15.03■□□□□ -0
TDP1-205ENST00000553527 A0A087WYN8 130 aa15.02■□□□□ -0
TDP1-205ENST00000553527 C11orf86A6NJI1 115 aa15.02■□□□□ -0
TDP1-205ENST00000553527 H3BRM9 83 aa15.02■□□□□ -0
TDP1-205ENST00000553527 CARD19Q96LW7 228 aa15.02■□□□□ -0
TDP1-205ENST00000553527 SYCNQ0VAF6 134 aa15.01□□□□□ -0.01
TDP1-205ENST00000553527 CIRBPQ14011 172 aaKnown RBP15.01□□□□□ -0.01
TDP1-205ENST00000553527 ODF1Q14990 250 aa15.01□□□□□ -0.01
TDP1-205ENST00000553527 MAJINQ3KP22 176 aa15.01□□□□□ -0.01
TDP1-205ENST00000553527 SPACA4Q8TDM5 124 aa15.01□□□□□ -0.01
TDP1-205ENST00000553527 ZNF22P17026 224 aaPredicted RBP15□□□□□ -0.01
TDP1-205ENST00000553527 RPL37AP61513 92 aaKnown RBP15□□□□□ -0.01
TDP1-205ENST00000553527 SMIM1B2RUZ4 78 aa14.98□□□□□ -0.01
TDP1-205ENST00000553527 SPINK8P0C7L1 97 aa14.98□□□□□ -0.01
TDP1-205ENST00000553527 S100A2P29034 98 aa14.98□□□□□ -0.01
TDP1-205ENST00000553527 TMEM170BQ5T4T1 132 aa14.98□□□□□ -0.01
TDP1-205ENST00000553527 HIST3H2BBQ8N257 126 aa14.98□□□□□ -0.01
TDP1-205ENST00000553527 A0A096LNI7 61 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 SYS1-DBNDD2H3BUS1 97 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 PRSS2P07478 247 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 KRTAP10-4P60372 401 aaPredicted RBP14.97□□□□□ -0.01
TDP1-205ENST00000553527 C2orf48Q96LS8 159 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 CAMK2N2Q96S95 79 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 TOMM7Q9P0U1 55 aa14.97□□□□□ -0.01
TDP1-205ENST00000553527 Q6ZRU5 148 aa14.96□□□□□ -0.01
TDP1-205ENST00000553527 PLNP26678 52 aa14.95□□□□□ -0.02
TDP1-205ENST00000553527 KRTDAPP60985 99 aa14.94□□□□□ -0.02
TDP1-205ENST00000553527 SNRPEP62304 92 aaKnown RBP14.94□□□□□ -0.02
TDP1-205ENST00000553527 Q8IZM0 81 aa14.94□□□□□ -0.02
TDP1-205ENST00000553527 STPG4Q8N801 248 aa14.94□□□□□ -0.02
TDP1-205ENST00000553527 PMCHL2Q9BQD1 86 aa14.94□□□□□ -0.02
TDP1-205ENST00000553527 F8WDY8 70 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 NDUFA1O15239 70 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 DPM2O94777 84 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 C3orf79P0CE67 100 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 KIAA0087Q14695 138 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 MYCBP2O75592 4640 aa14.93□□□□□ -0.02
TDP1-205ENST00000553527 PET117Q6UWS5 81 aa14.92□□□□□ -0.02
TDP1-205ENST00000553527 HIST1H2BLQ99880 126 aa14.92□□□□□ -0.02
TDP1-205ENST00000553527 PLAC8Q9NZF1 115 aa14.92□□□□□ -0.02
TDP1-205ENST00000553527 GAGE2BQ13066 116 aa14.91□□□□□ -0.02
TDP1-205ENST00000553527 C6orf226Q5I0X4 101 aa14.91□□□□□ -0.02
TDP1-205ENST00000553527 COX7B2Q8TF08 81 aa14.91□□□□□ -0.02
TDP1-205ENST00000553527 PKIGQ9Y2B9 76 aa14.91□□□□□ -0.02
TDP1-205ENST00000553527 IGKCP01834 107 aa14.9□□□□□ -0.02
TDP1-205ENST00000553527 CKS1BP61024 79 aa14.9□□□□□ -0.02
TDP1-205ENST00000553527 IGLV5-39A0A0G2JS06 123 aa14.89□□□□□ -0.03
TDP1-205ENST00000553527 TMEM223A0PJW6 202 aa14.89□□□□□ -0.03
TDP1-205ENST00000553527 C5orf52A6NGY3 159 aa14.89□□□□□ -0.03
TDP1-205ENST00000553527 J3QL48 77 aa14.89□□□□□ -0.03
TDP1-205ENST00000553527 LINC00474Q9P2X8 69 aa14.89□□□□□ -0.03
TDP1-205ENST00000553527 LOC107984640A0A0U1RRK4 108 aa14.88□□□□□ -0.03
TDP1-205ENST00000553527 LINC01545Q5VT33 79 aa14.88□□□□□ -0.03
TDP1-205ENST00000553527 C2orf82Q6UX34 121 aa14.88□□□□□ -0.03
TDP1-205ENST00000553527 C20orf202A1L168 122 aa14.87□□□□□ -0.03
TDP1-205ENST00000553527 CXCL5P42830 114 aa14.87□□□□□ -0.03
TDP1-205ENST00000553527 UNQ6190/PRO20217Q6UXQ8 127 aa14.87□□□□□ -0.03
TDP1-205ENST00000553527 C7orf33Q8WU49 177 aa14.87□□□□□ -0.03
TDP1-205ENST00000553527 HNRNPA3P51991 378 aaKnown RBP14.86□□□□□ -0.03
TDP1-205ENST00000553527 C10orf25Q5T742 122 aa14.86□□□□□ -0.03
TDP1-205ENST00000553527 TMA7Q9Y2S6 64 aaKnown RBP14.86□□□□□ -0.03
TDP1-205ENST00000553527 DMBT1Q9UGM3 2413 aaPredicted RBP14.86□□□□□ -0.03
TDP1-205ENST00000553527 PTTG1IPP53801 180 aa14.85□□□□□ -0.03
TDP1-205ENST00000553527 RPL18AQ02543 176 aaKnown RBP14.85□□□□□ -0.03
TDP1-205ENST00000553527 RNF151Q2KHN1 245 aa14.84□□□□□ -0.03
TDP1-205ENST00000553527 C6orf48Q9UBA6 75 aa14.84□□□□□ -0.03
TDP1-205ENST00000553527 TRBV30A0A0K0K1B3 111 aa14.83□□□□□ -0.04
TDP1-205ENST00000553527 HERVK_113P61574 105 aa14.83□□□□□ -0.04
TDP1-205ENST00000553527 KRTAP29-1A8MX34 341 aaPredicted RBP14.8□□□□□ -0.04
TDP1-205ENST00000553527 A0A1W2PNN7 141 aa14.77□□□□□ -0.05
TDP1-205ENST00000553527 AKR1D1P51857 326 aa14.77□□□□□ -0.05
TDP1-205ENST00000553527 HERC1Q15751 4861 aa14.77□□□□□ -0.05
TDP1-205ENST00000553527 LEPROTO15243 131 aa14.76□□□□□ -0.05
TDP1-205ENST00000553527 C9orf116Q5BN46 136 aaPredicted RBP14.76□□□□□ -0.05
TDP1-205ENST00000553527 SFTA2Q6UW10 78 aa14.76□□□□□ -0.05
TDP1-205ENST00000553527 PLEKHB2Q96CS7 222 aa14.76□□□□□ -0.05
TDP1-205ENST00000553527 TLX1NBP0CAT3 122 aa14.75□□□□□ -0.05
TDP1-205ENST00000553527 PKHD1L1Q86WI1 4243 aa14.75□□□□□ -0.05
TDP1-205ENST00000553527 LRP1Q07954 4544 aaKnown RBP14.74□□□□□ -0.05
TDP1-205ENST00000553527 NDUFC2-KCTD14E9PQ53 114 aa14.73□□□□□ -0.05
TDP1-205ENST00000553527 GAGE2EQ4V326 116 aa14.73□□□□□ -0.05
TDP1-205ENST00000553527 ATOH7Q8N100 152 aa14.73□□□□□ -0.05
TDP1-205ENST00000553527 ZNF625Q96I27 306 aaPredicted RBP14.73□□□□□ -0.05
TDP1-205ENST00000553527 GAGE2DQ9UEU5 116 aa14.73□□□□□ -0.05
TDP1-205ENST00000553527 E9PLD3 99 aa14.72□□□□□ -0.05
TDP1-205ENST00000553527 OXTP01178 125 aa14.72□□□□□ -0.05
TDP1-205ENST00000553527 TSPEAR-AS2P59090 65 aa14.72□□□□□ -0.05
TDP1-205ENST00000553527 Q6ZRP5 223 aa14.72□□□□□ -0.05
TDP1-205ENST00000553527 J3QQQ9 107 aa14.71□□□□□ -0.05
TDP1-205ENST00000553527 LGALS3P17931 250 aaKnown RBP14.71□□□□□ -0.05
TDP1-205ENST00000553527 PRR3P79522 188 aaKnown RBP14.71□□□□□ -0.05
TDP1-205ENST00000553527 NDUFA12Q9UI09 145 aa14.7□□□□□ -0.06
TDP1-205ENST00000553527 MYMXA0A1B0GTQ4 84 aa14.68□□□□□ -0.06
TDP1-205ENST00000553527 FAM168BA1KXE4 195 aa14.68□□□□□ -0.06
TDP1-205ENST00000553527 SCGB1D1O95968 90 aa14.68□□□□□ -0.06
TDP1-205ENST00000553527 PHF5AQ7RTV0 110 aaKnown RBP14.68□□□□□ -0.06
TDP1-205ENST00000553527 ERG28Q9UKR5 140 aa14.68□□□□□ -0.06
TDP1-205ENST00000553527 NMUP48645 174 aa14.67□□□□□ -0.06
TDP1-205ENST00000553527 FAT3Q8TDW7 4589 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms