RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
MTHFD1-204ENST00000553405 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
MTHFD1-204ENST00000553405 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 PANO1I0J062 215 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 DPM2O94777 84 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 S100A6P06703 90 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 PLNP26678 52 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 TMEM170BQ5T4T1 132 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
MTHFD1-204ENST00000553405 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
MTHFD1-204ENST00000553405 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
MTHFD1-204ENST00000553405 VPS13BQ7Z7G8 4022 aa9.5□□□□□ -0.89
MTHFD1-204ENST00000553405 NDUFA1O15239 70 aa9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 IGKCP01834 107 aa9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 XGP55808 180 aa9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 KRTDAPP60985 99 aa9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
MTHFD1-204ENST00000553405 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.48□□□□□ -0.89
MTHFD1-204ENST00000553405 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
MTHFD1-204ENST00000553405 CDK2AP2O75956 126 aa9.47□□□□□ -0.89
MTHFD1-204ENST00000553405 C6orf226Q5I0X4 101 aa9.47□□□□□ -0.89
MTHFD1-204ENST00000553405 PRSS2P07478 247 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 TLX1NBP0CAT3 122 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 S100A2P29034 98 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 CXCL5P42830 114 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 TSPEAR-AS2P59090 65 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 ZNF625Q96I27 306 aaPredicted RBP9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 KRTAP17-1Q9BYP8 105 aa9.46□□□□□ -0.9
MTHFD1-204ENST00000553405 A0A096LNI7 61 aa9.45□□□□□ -0.9
MTHFD1-204ENST00000553405 CHTF8P0CG12 524 aa9.45□□□□□ -0.9
MTHFD1-204ENST00000553405 CKS1BP61024 79 aa9.44□□□□□ -0.9
MTHFD1-204ENST00000553405 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
MTHFD1-204ENST00000553405 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
MTHFD1-204ENST00000553405 Q6ZRP5 223 aa9.43□□□□□ -0.9
MTHFD1-204ENST00000553405 EPM2AB3EWF7 344 aa9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 LEPROTO15243 131 aa9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 HAMPP81172 84 aa9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 SCXQ7RTU7 201 aa9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 TMA7Q9Y2S6 64 aaKnown RBP9.42□□□□□ -0.9
MTHFD1-204ENST00000553405 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
MTHFD1-204ENST00000553405 E9PLD3 99 aa9.41□□□□□ -0.9
MTHFD1-204ENST00000553405 STPG4Q8N801 248 aa9.41□□□□□ -0.9
MTHFD1-204ENST00000553405 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
MTHFD1-204ENST00000553405 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
MTHFD1-204ENST00000553405 IGKV2D-26A0A0A0MRZ7 120 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 C20orf202A1L168 122 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 J3QQQ9 107 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 PLAC8Q9NZF1 115 aa9.39□□□□□ -0.91
MTHFD1-204ENST00000553405 GAGE2BQ13066 116 aa9.38□□□□□ -0.91
MTHFD1-204ENST00000553405 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
MTHFD1-204ENST00000553405 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
MTHFD1-204ENST00000553405 ATOH7Q8N100 152 aa9.38□□□□□ -0.91
MTHFD1-204ENST00000553405 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
MTHFD1-204ENST00000553405 PKHD1L1Q86WI1 4243 aa9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 A0A087WYN8 130 aa9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 HERVK_113P61574 105 aa9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 RPL18AQ02543 176 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 C9orf129Q5T035 196 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 SFTA2Q6UW10 78 aa9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 NDUFA12Q9UI09 145 aa9.37□□□□□ -0.91
MTHFD1-204ENST00000553405 MAJINQ3KP22 176 aa9.36□□□□□ -0.91
MTHFD1-204ENST00000553405 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
MTHFD1-204ENST00000553405 ERG28Q9UKR5 140 aa9.36□□□□□ -0.91
MTHFD1-204ENST00000553405 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
MTHFD1-204ENST00000553405 AKR1D1P51857 326 aa9.35□□□□□ -0.91
MTHFD1-204ENST00000553405 NMUP48645 174 aa9.34□□□□□ -0.91
MTHFD1-204ENST00000553405 GAGE2EQ4V326 116 aa9.34□□□□□ -0.91
MTHFD1-204ENST00000553405 GAGE2DQ9UEU5 116 aa9.34□□□□□ -0.91
MTHFD1-204ENST00000553405 MYMXA0A1B0GTQ4 84 aa9.33□□□□□ -0.92
MTHFD1-204ENST00000553405 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
MTHFD1-204ENST00000553405 HERV-K104P63124 156 aa9.33□□□□□ -0.92
MTHFD1-204ENST00000553405 COX17Q14061 63 aa9.33□□□□□ -0.92
MTHFD1-204ENST00000553405 TTTY13Q9BZ97 58 aa9.33□□□□□ -0.92
MTHFD1-204ENST00000553405 PFN2P35080 140 aa9.32□□□□□ -0.92
MTHFD1-204ENST00000553405 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-204ENST00000553405 XAGE1AQ9HD64 81 aa9.32□□□□□ -0.92
MTHFD1-204ENST00000553405 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-204ENST00000553405 SCGB1D1O95968 90 aa9.31□□□□□ -0.92
MTHFD1-204ENST00000553405 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-204ENST00000553405 A0A0J9YXY3 114 aa9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 SMR3BP02814 79 aaPredicted RBP9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 SMIM13P0DJ93 91 aa9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 LITAFQ99732 161 aa9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
MTHFD1-204ENST00000553405 KRTAP10-4P60372 401 aaPredicted RBP9.29□□□□□ -0.92
MTHFD1-204ENST00000553405 PYY3Q5JQD4 70 aa9.29□□□□□ -0.92
MTHFD1-204ENST00000553405 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
MTHFD1-204ENST00000553405 Q8N1X5 172 aa9.29□□□□□ -0.92
MTHFD1-204ENST00000553405 Q8NDZ9 215 aa9.29□□□□□ -0.92
MTHFD1-204ENST00000553405 PLA2G2DQ9UNK4 145 aa9.28□□□□□ -0.92
MTHFD1-204ENST00000553405 A0A0U1RRA0 63 aa9.27□□□□□ -0.93
MTHFD1-204ENST00000553405 ADAMTSL4-AS1Q5T5F5 129 aa9.27□□□□□ -0.93
MTHFD1-204ENST00000553405 DPH3Q96FX2 82 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms