RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 TMEM14CQ9P0S9 112 aa1.24□□□□□ -2.21
NPAS3-212ENST00000552696 R4GMQ9 66 aa1.24□□□□□ -2.21
NPAS3-212ENST00000552696 INTS1Q8N201 2190 aaKnown RBP1.24□□□□□ -2.21
NPAS3-212ENST00000552696 COL11A1P12107 1806 aaPredicted RBP1.24□□□□□ -2.21
NPAS3-212ENST00000552696 MUC6Q6W4X9 2439 aa1.24□□□□□ -2.21
NPAS3-212ENST00000552696 TRAV12-3A0A0B4J271 114 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 CXorf51AA0A1B0GTR3 108 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 LOC101927531A0A1B0GV80 90 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 I3L3M4 83 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 M0R1W7 72 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 HMGN4O00479 90 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 CCL5P13501 91 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 CD24P25063 80 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 PI4KAP42356 2102 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 RPL28P46779 137 aaKnown RBP1.23□□□□□ -2.21
NPAS3-212ENST00000552696 PDE6HQ13956 83 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 NREPQ16612 68 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 C1orf134Q5TEV5 83 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 CDC42SE2Q9NRR3 84 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 LENEPQ9Y5L5 61 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 LHFPL6Q9Y693 200 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 PLXNB2O15031 1838 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 CACNA1GO43497 2377 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 ARHGAP32A7KAX9 2087 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 DSCAMO60469 2012 aa1.23□□□□□ -2.21
NPAS3-212ENST00000552696 HEATR5BQ9P2D3 2071 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 LTBP2Q14767 1821 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 TRGV4A0A0C4DH28 118 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 TRBV6-5A0A0K0K1A5 114 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 TRBV6-1A0A0K0K1D8 114 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 ODF3BA8MYP8 253 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 H0YGX0 51 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 IGLV1-51P01701 117 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 COX6B1P14854 86 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 IL9P15248 144 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 ROMO1P60602 79 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 TFF3Q07654 80 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 C10orf113Q5VZT2 155 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 ZNF833PQ6ZTB9 187 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 Q8IYB0 196 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 WFDC9Q8NEX5 89 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 AMELXQ99217 191 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 Q9BRP9 147 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 NDUFA4L2Q9NRX3 87 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 LINC00846Q9NV44 126 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 MRPL36Q9P0J6 103 aaKnown RBP1.22□□□□□ -2.21
NPAS3-212ENST00000552696 PSORS1C2Q9UIG4 136 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 CCL26Q9Y258 94 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 C22orf24Q9Y442 160 aa1.22□□□□□ -2.21
NPAS3-212ENST00000552696 TNRC6CQ9HCJ0 1690 aaKnown RBP1.22□□□□□ -2.21
NPAS3-212ENST00000552696 SPAG17Q6Q759 2223 aa1.21□□□□□ -2.21
NPAS3-212ENST00000552696 HMCN1Q96RW7 5635 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 COL4A6Q14031 1691 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 TRAV10A0A0B4J240 114 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 TRBV10-1A0A0K0K1A3 114 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 TFF1P04155 84 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 SPAG11BQ08648 103 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 LINC01590Q5TEZ4 76 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 FAM27BQ5VT28 67 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 SPAG11AQ6PDA7 123 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 LYZL1Q6UWQ5 148 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 OBSCN-AS1Q96MR7 158 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 FAM215AQ9Y5M1 114 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 DNAJC13O75165 2243 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 PRRC2BQ5JSZ5 2229 aaKnown RBP1.21□□□□□ -2.22
NPAS3-212ENST00000552696 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 EML5Q05BV3 1969 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 PDE4DIPQ5VU43 2346 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 ZGRF1Q86YA3 2104 aa1.21□□□□□ -2.22
NPAS3-212ENST00000552696 ZFHX3Q15911 3703 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 IGHV3-64A0A075B6Q5 118 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 IGIPA6NJ69 53 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 H3BSH0 61 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 FREM3P0C091 2139 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 DEFA4P12838 97 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 MIR22HGQ0VDD5 57 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 NNATQ16517 81 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 Q86TA4 180 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 FDCSPQ8NFU4 85 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 COX7B2Q8TF08 81 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 LINC00208Q96KT6 92 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 ZNF831Q5JPB2 1677 aa1.2□□□□□ -2.22
NPAS3-212ENST00000552696 ESPL1Q14674 2120 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 IGKV1D-42A0A075B6H8 117 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 A0A087WSZ3 146 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 IGHV1-18A0A0C4DH31 117 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 SSC5DA1L4H1 1573 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 B4DSR2 109 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 H0Y9P7 68 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 MGPP08493 103 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 HAMPP81172 84 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 DEFB114Q30KQ6 69 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 FREM1Q5H8C1 2179 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 Q6ZQT0 140 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 Q8NDZ9 215 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 DOCK10Q96BY6 2186 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 DMAC1Q96GE9 116 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 SMIM2Q9BVW6 85 aa1.19□□□□□ -2.22
NPAS3-212ENST00000552696 WFDC10AQ9H1F0 79 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms