RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 MRAP2Q96G30 205 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 TNFSF18Q9UNG2 199 aa4.24□□□□□ -1.73
PRIM1-208ENST00000552590 CTXND1A0A1B0GTU2 59 aa4.23□□□□□ -1.73
PRIM1-208ENST00000552590 SDHAF1A6NFY7 115 aa4.23□□□□□ -1.73
PRIM1-208ENST00000552590 INMT-MINDY4F8WBC2 141 aa4.23□□□□□ -1.73
PRIM1-208ENST00000552590 RPS20P60866 119 aaKnown RBP4.23□□□□□ -1.73
PRIM1-208ENST00000552590 RPL32P62910 135 aaKnown RBP4.23□□□□□ -1.73
PRIM1-208ENST00000552590 SERF2P84101 59 aa4.23□□□□□ -1.73
PRIM1-208ENST00000552590 NKX6-2Q9C056 277 aaPredicted RBP4.23□□□□□ -1.73
PRIM1-208ENST00000552590 IGLC6P0CF74 106 aa4.22□□□□□ -1.73
PRIM1-208ENST00000552590 PMCHP20382 165 aa4.22□□□□□ -1.73
PRIM1-208ENST00000552590 FAM19A1Q7Z5A9 133 aa4.22□□□□□ -1.73
PRIM1-208ENST00000552590 STOML3Q8TAV4 291 aa4.22□□□□□ -1.73
PRIM1-208ENST00000552590 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
PRIM1-208ENST00000552590 IGKV2-28A0A075B6P5 120 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 IGHV3OR16-9A0A0B4J2B5 98 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 I3L3M4 83 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 SSNA1O43805 119 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 IGKV2D-28P01615 120 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 BAGE2Q86Y30 109 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 CBLN2Q8IUK8 224 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 TMEM242Q9NWH2 141 aa4.21□□□□□ -1.74
PRIM1-208ENST00000552590 MAP1LC3B2A6NCE7 125 aa4.2□□□□□ -1.74
PRIM1-208ENST00000552590 RPL37P61927 97 aaKnown RBP4.2□□□□□ -1.74
PRIM1-208ENST00000552590 RPL7L1Q6DKI1 246 aaKnown RBP4.2□□□□□ -1.74
PRIM1-208ENST00000552590 TMEM18Q96B42 140 aa4.2□□□□□ -1.74
PRIM1-208ENST00000552590 MAP1LC3BQ9GZQ8 125 aa4.2□□□□□ -1.74
PRIM1-208ENST00000552590 RNASE7Q9H1E1 156 aaKnown RBP4.2□□□□□ -1.74
PRIM1-208ENST00000552590 IGLV6-57P01721 117 aa4.19□□□□□ -1.74
PRIM1-208ENST00000552590 TRGC1P0CF51 173 aa4.19□□□□□ -1.74
PRIM1-208ENST00000552590 Q6ZUT4 128 aa4.19□□□□□ -1.74
PRIM1-208ENST00000552590 HIGD2AQ9BW72 106 aa4.19□□□□□ -1.74
PRIM1-208ENST00000552590 A0A1B0GV50 99 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 VCYO14598 125 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 SCO1O75880 301 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 FHITP49789 147 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 IFITM2Q01629 132 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 C7orf77A4D0Y5 90 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 IFITM10A6NMD0 228 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 TMEM238C9JI98 176 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 PRSS2P07478 247 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 RAB14P61106 215 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 AKR1C8PQ5T2L2 129 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 TCEAL7Q9BRU2 100 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 GNB1LQ9BYB4 327 aa4.18□□□□□ -1.74
PRIM1-208ENST00000552590 S100A9P06702 114 aaKnown RBP4.17□□□□□ -1.74
PRIM1-208ENST00000552590 MOBPQ13875 183 aa4.17□□□□□ -1.74
PRIM1-208ENST00000552590 Q5BKY6 102 aa4.17□□□□□ -1.74
PRIM1-208ENST00000552590 C20orf202A1L168 122 aa4.16□□□□□ -1.74
PRIM1-208ENST00000552590 RPL35P42766 123 aaKnown RBP4.16□□□□□ -1.74
PRIM1-208ENST00000552590 TMUB2Q71RG4 321 aa4.16□□□□□ -1.74
PRIM1-208ENST00000552590 SLC7A5P1Q8MH63 180 aa4.16□□□□□ -1.74
PRIM1-208ENST00000552590 TMEM126AQ9H061 195 aa4.16□□□□□ -1.74
PRIM1-208ENST00000552590 CSDC2Q9Y534 153 aaKnown RBP4.16□□□□□ -1.74
PRIM1-208ENST00000552590 F2Z2F3 143 aa4.15□□□□□ -1.75
PRIM1-208ENST00000552590 IFNA1P01562 189 aa4.15□□□□□ -1.75
PRIM1-208ENST00000552590 GIPP09681 153 aaPredicted RBP4.15□□□□□ -1.75
PRIM1-208ENST00000552590 KRTAP10-12P60413 245 aa4.15□□□□□ -1.75
PRIM1-208ENST00000552590 URB1-AS1Q96HZ7 61 aa4.15□□□□□ -1.75
PRIM1-208ENST00000552590 BORCS7-ASMTA0A0B4J1R7 106 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 IGLV9-49A0A0B4J1Y8 123 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 LINC00862A6NCI5 91 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 CENPWQ5EE01 88 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 TEX261Q6UWH6 196 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 C9orf62Q8N4C0 152 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 NKAPP1Q8N9T2 125 aa4.14□□□□□ -1.75
PRIM1-208ENST00000552590 RAB19A4D1S5 217 aa4.13□□□□□ -1.75
PRIM1-208ENST00000552590 HMSDA8MTL9 139 aa4.13□□□□□ -1.75
PRIM1-208ENST00000552590 M0R378 163 aa4.13□□□□□ -1.75
PRIM1-208ENST00000552590 CLLU1Q5K131 121 aa4.13□□□□□ -1.75
PRIM1-208ENST00000552590 SFT2D1Q8WV19 159 aa4.13□□□□□ -1.75
PRIM1-208ENST00000552590 GEMIN7Q9H840 131 aaKnown RBP4.13□□□□□ -1.75
PRIM1-208ENST00000552590 ZNF706Q9Y5V0 76 aaPredicted RBP4.13□□□□□ -1.75
PRIM1-208ENST00000552590 IGLV5-37A0A075B6J1 123 aa4.12□□□□□ -1.75
PRIM1-208ENST00000552590 MED9Q9NWA0 146 aa4.12□□□□□ -1.75
PRIM1-208ENST00000552590 FXYD6-FXYD2A0A087WZ82 144 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 TGIF2-C20orf24A0A0A6YYL0 155 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 TRBV6-5A0A0K0K1A5 114 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 XKRY2A2RUG3 117 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 CKS1BP61024 79 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 SSBP3-AS1Q7Z2R9 100 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 KCNRGQ8N5I3 272 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 FAM213BQ8TBF2 198 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 FAM104AQ969W3 186 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 ST20Q9HBF5 79 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 TRBV20OR9-2A0A075B6H5 130 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 LINC01551Q86U37 167 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 SLC51BQ86UW2 128 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 TOMM7Q9P0U1 55 aa4.11□□□□□ -1.75
PRIM1-208ENST00000552590 CHTOPQ9Y3Y2 248 aaKnown RBP4.11□□□□□ -1.75
PRIM1-208ENST00000552590 SMLR1H3BR10 107 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 SPRR2EP22531 72 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 SPRR2BP35325 72 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 SPRR2AP35326 72 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 GNG4P50150 75 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 POLR2KP53803 58 aaKnown RBP4.1□□□□□ -1.75
PRIM1-208ENST00000552590 SMAGPQ0VAQ4 97 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 PAPPA-AS1Q5QFB9 102 aa4.1□□□□□ -1.75
PRIM1-208ENST00000552590 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms