RNA–Protein interactions for RNA: ENST00000552483.5

CNOT2-239, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-239ENST00000552483 NDUFA6P56556 154 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 SEC11AP67812 179 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 RNF151Q2KHN1 245 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 LCE2CQ5TA81 110 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 BAGE3Q86Y29 109 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 STPG4Q8N801 248 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 PKHD1L1Q86WI1 4243 aa6.84□□□□□ -1.31
CNOT2-239ENST00000552483 F8WDY8 70 aa6.83□□□□□ -1.32
CNOT2-239ENST00000552483 ATP5LO75964 103 aa6.83□□□□□ -1.32
CNOT2-239ENST00000552483 INAFM2P0DMQ5 153 aa6.83□□□□□ -1.32
CNOT2-239ENST00000552483 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
CNOT2-239ENST00000552483 RPL18AQ02543 176 aaKnown RBP6.83□□□□□ -1.32
CNOT2-239ENST00000552483 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
CNOT2-239ENST00000552483 Q8IZM0 81 aa6.83□□□□□ -1.32
CNOT2-239ENST00000552483 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CNOT2-239ENST00000552483 A0A1W2PNN7 141 aa6.82□□□□□ -1.32
CNOT2-239ENST00000552483 C11orf86A6NJI1 115 aa6.82□□□□□ -1.32
CNOT2-239ENST00000552483 HSBP1O75506 76 aa6.82□□□□□ -1.32
CNOT2-239ENST00000552483 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
CNOT2-239ENST00000552483 Q6ZRP5 223 aa6.82□□□□□ -1.32
CNOT2-239ENST00000552483 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
CNOT2-239ENST00000552483 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
CNOT2-239ENST00000552483 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
CNOT2-239ENST00000552483 RPL37AP61513 92 aaKnown RBP6.81□□□□□ -1.32
CNOT2-239ENST00000552483 IFI27L1Q96BM0 104 aa6.81□□□□□ -1.32
CNOT2-239ENST00000552483 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 PRSS2P07478 247 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
CNOT2-239ENST00000552483 KRTAP7-1Q8IUC3 87 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 PKIGQ9Y2B9 76 aa6.8□□□□□ -1.32
CNOT2-239ENST00000552483 CHTOPQ9Y3Y2 248 aaKnown RBP6.8□□□□□ -1.32
CNOT2-239ENST00000552483 FLG2Q5D862 2391 aaPredicted RBP6.79□□□□□ -1.32
CNOT2-239ENST00000552483 IGLV5-39A0A0G2JS06 123 aa6.79□□□□□ -1.32
CNOT2-239ENST00000552483 GAGE2EQ4V326 116 aa6.79□□□□□ -1.32
CNOT2-239ENST00000552483 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
CNOT2-239ENST00000552483 GAGE2DQ9UEU5 116 aa6.79□□□□□ -1.32
CNOT2-239ENST00000552483 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
CNOT2-239ENST00000552483 ATP6V1G1O75348 118 aa6.78□□□□□ -1.32
CNOT2-239ENST00000552483 CKS1BP61024 79 aa6.78□□□□□ -1.32
CNOT2-239ENST00000552483 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
CNOT2-239ENST00000552483 LINC00474Q9P2X8 69 aa6.78□□□□□ -1.32
CNOT2-239ENST00000552483 NDUFC2-KCTD14E9PQ53 114 aa6.77□□□□□ -1.33
CNOT2-239ENST00000552483 F8VRH5 84 aa6.77□□□□□ -1.33
CNOT2-239ENST00000552483 H3BRM9 83 aa6.77□□□□□ -1.33
CNOT2-239ENST00000552483 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
CNOT2-239ENST00000552483 PHF5AQ7RTV0 110 aaKnown RBP6.77□□□□□ -1.33
CNOT2-239ENST00000552483 H0Y8G0 127 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 FABP4P15090 132 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 CXCL5P42830 114 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 ODF1Q14990 250 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 TMEM170BQ5T4T1 132 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 KRTAP11-1Q8IUC1 163 aa6.76□□□□□ -1.33
CNOT2-239ENST00000552483 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
CNOT2-239ENST00000552483 PRR3P79522 188 aaKnown RBP6.75□□□□□ -1.33
CNOT2-239ENST00000552483 FAM19A5Q7Z5A7 132 aaPredicted RBP6.75□□□□□ -1.33
CNOT2-239ENST00000552483 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
CNOT2-239ENST00000552483 MYCBP2O75592 4640 aa6.75□□□□□ -1.33
CNOT2-239ENST00000552483 SERTAD4-AS1Q5TG53 156 aa6.74□□□□□ -1.33
CNOT2-239ENST00000552483 C7orf33Q8WU49 177 aa6.74□□□□□ -1.33
CNOT2-239ENST00000552483 PMCHL2Q9BQD1 86 aa6.74□□□□□ -1.33
CNOT2-239ENST00000552483 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
CNOT2-239ENST00000552483 S100A1P23297 94 aa6.73□□□□□ -1.33
CNOT2-239ENST00000552483 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
CNOT2-239ENST00000552483 ZNF625Q96I27 306 aaPredicted RBP6.72□□□□□ -1.33
CNOT2-239ENST00000552483 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
CNOT2-239ENST00000552483 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
CNOT2-239ENST00000552483 COA6Q5JTJ3 125 aaKnown RBP6.71□□□□□ -1.34
CNOT2-239ENST00000552483 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
CNOT2-239ENST00000552483 M0QXV9 152 aa6.7□□□□□ -1.34
CNOT2-239ENST00000552483 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
CNOT2-239ENST00000552483 PFN2P35080 140 aa6.69□□□□□ -1.34
CNOT2-239ENST00000552483 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
CNOT2-239ENST00000552483 KRTAP29-1A8MX34 341 aaPredicted RBP6.68□□□□□ -1.34
CNOT2-239ENST00000552483 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
CNOT2-239ENST00000552483 Q8NDZ9 215 aa6.68□□□□□ -1.34
CNOT2-239ENST00000552483 C22orf24Q9Y442 160 aa6.68□□□□□ -1.34
CNOT2-239ENST00000552483 SYS1-DBNDD2H3BUS1 97 aa6.67□□□□□ -1.34
CNOT2-239ENST00000552483 DPM2O94777 84 aa6.67□□□□□ -1.34
CNOT2-239ENST00000552483 IGKCP01834 107 aa6.67□□□□□ -1.34
CNOT2-239ENST00000552483 SRSF9Q13242 221 aaKnown RBP eCLIP6.67□□□□□ -1.34
CNOT2-239ENST00000552483 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
CNOT2-239ENST00000552483 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
CNOT2-239ENST00000552483 C3orf79P0CE67 100 aa6.66□□□□□ -1.34
CNOT2-239ENST00000552483 PLNP26678 52 aa6.66□□□□□ -1.34
CNOT2-239ENST00000552483 C1orf137Q5JT78 98 aa6.66□□□□□ -1.34
CNOT2-239ENST00000552483 SND1-IT1Q9HBX3 110 aa6.66□□□□□ -1.34
CNOT2-239ENST00000552483 LEPROTO15243 131 aa6.65□□□□□ -1.34
CNOT2-239ENST00000552483 UBE2BP63146 152 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms