RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
CHMP1A-206ENST00000549139 ATP5LO75964 103 aa9.93□□□□□ -0.82
CHMP1A-206ENST00000549139 MAJINQ3KP22 176 aa9.93□□□□□ -0.82
CHMP1A-206ENST00000549139 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
CHMP1A-206ENST00000549139 IGLV5-45A0A087WSX0 123 aa9.92□□□□□ -0.82
CHMP1A-206ENST00000549139 UNQ6190/PRO20217Q6UXQ8 127 aa9.92□□□□□ -0.82
CHMP1A-206ENST00000549139 PTTG1IPP53801 180 aa9.91□□□□□ -0.82
CHMP1A-206ENST00000549139 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
CHMP1A-206ENST00000549139 BAGE3Q86Y29 109 aa9.91□□□□□ -0.82
CHMP1A-206ENST00000549139 Q8IZM0 81 aa9.91□□□□□ -0.82
CHMP1A-206ENST00000549139 PACRGQ96M98 296 aaPredicted RBP9.91□□□□□ -0.82
CHMP1A-206ENST00000549139 PRSS2P07478 247 aa9.9□□□□□ -0.82
CHMP1A-206ENST00000549139 NDUFA6P56556 154 aa9.9□□□□□ -0.82
CHMP1A-206ENST00000549139 GAGE2BQ13066 116 aa9.9□□□□□ -0.82
CHMP1A-206ENST00000549139 LINC00469Q8N7U9 141 aa9.9□□□□□ -0.82
CHMP1A-206ENST00000549139 STPG4Q8N801 248 aa9.9□□□□□ -0.82
CHMP1A-206ENST00000549139 TRBV30A0A0K0K1B3 111 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 HSBP1O75506 76 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 SCO1O75880 301 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 IGLC3P0DOY3 106 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 TOMM7Q9P0U1 55 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
CHMP1A-206ENST00000549139 C2orf82Q6UX34 121 aa9.88□□□□□ -0.83
CHMP1A-206ENST00000549139 SMIM1B2RUZ4 78 aa9.87□□□□□ -0.83
CHMP1A-206ENST00000549139 CKS1BP61024 79 aa9.87□□□□□ -0.83
CHMP1A-206ENST00000549139 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
CHMP1A-206ENST00000549139 H3BRM9 83 aa9.86□□□□□ -0.83
CHMP1A-206ENST00000549139 FAM19A2Q8N3H0 131 aa9.86□□□□□ -0.83
CHMP1A-206ENST00000549139 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
CHMP1A-206ENST00000549139 SERF1AO75920 110 aa9.85□□□□□ -0.83
CHMP1A-206ENST00000549139 CXCL5P42830 114 aa9.85□□□□□ -0.83
CHMP1A-206ENST00000549139 TRAV12-1A0A0B4J245 112 aa9.84□□□□□ -0.83
CHMP1A-206ENST00000549139 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
CHMP1A-206ENST00000549139 LINC00310P59036 64 aa9.84□□□□□ -0.83
CHMP1A-206ENST00000549139 Q6ZRP5 223 aa9.84□□□□□ -0.83
CHMP1A-206ENST00000549139 COX7B2Q8TF08 81 aa9.84□□□□□ -0.83
CHMP1A-206ENST00000549139 F8VRH5 84 aa9.83□□□□□ -0.84
CHMP1A-206ENST00000549139 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
CHMP1A-206ENST00000549139 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
CHMP1A-206ENST00000549139 CHTOPQ9Y3Y2 248 aaKnown RBP9.83□□□□□ -0.84
CHMP1A-206ENST00000549139 A0A1W2PNN7 141 aa9.82□□□□□ -0.84
CHMP1A-206ENST00000549139 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
CHMP1A-206ENST00000549139 NUPR1O60356 82 aa9.82□□□□□ -0.84
CHMP1A-206ENST00000549139 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
CHMP1A-206ENST00000549139 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
CHMP1A-206ENST00000549139 LEPROTL1O95214 131 aa9.81□□□□□ -0.84
CHMP1A-206ENST00000549139 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
CHMP1A-206ENST00000549139 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
CHMP1A-206ENST00000549139 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BJP06899 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BOP23527 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BBP33778 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BDP58876 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BCP62807 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST2H2BEQ16778 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BHQ93079 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BNQ99877 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 HIST1H2BMQ99879 126 aa9.79□□□□□ -0.84
CHMP1A-206ENST00000549139 S100A1P23297 94 aa9.78□□□□□ -0.84
CHMP1A-206ENST00000549139 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
CHMP1A-206ENST00000549139 C9orf129Q5T035 196 aaKnown RBP9.76□□□□□ -0.85
CHMP1A-206ENST00000549139 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
CHMP1A-206ENST00000549139 FAM168BA1KXE4 195 aa9.75□□□□□ -0.85
CHMP1A-206ENST00000549139 FABP4P15090 132 aa9.75□□□□□ -0.85
CHMP1A-206ENST00000549139 ODF1Q14990 250 aa9.75□□□□□ -0.85
CHMP1A-206ENST00000549139 H0Y8G0 127 aa9.73□□□□□ -0.85
CHMP1A-206ENST00000549139 PRR3P79522 188 aaKnown RBP9.73□□□□□ -0.85
CHMP1A-206ENST00000549139 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
CHMP1A-206ENST00000549139 PHF5AQ7RTV0 110 aaKnown RBP9.73□□□□□ -0.85
CHMP1A-206ENST00000549139 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
CHMP1A-206ENST00000549139 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
CHMP1A-206ENST00000549139 LINC01600Q96MT4 127 aa9.72□□□□□ -0.85
CHMP1A-206ENST00000549139 ATP6V1G1O75348 118 aa9.71□□□□□ -0.86
CHMP1A-206ENST00000549139 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.86
CHMP1A-206ENST00000549139 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
CHMP1A-206ENST00000549139 COA6Q5JTJ3 125 aaKnown RBP9.7□□□□□ -0.86
CHMP1A-206ENST00000549139 LPAP08519 4548 aa9.7□□□□□ -0.86
CHMP1A-206ENST00000549139 PLNP26678 52 aa9.69□□□□□ -0.86
CHMP1A-206ENST00000549139 COX17Q14061 63 aa9.69□□□□□ -0.86
CHMP1A-206ENST00000549139 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
CHMP1A-206ENST00000549139 M0QXV9 152 aa9.68□□□□□ -0.86
CHMP1A-206ENST00000549139 PSORS1C2Q9UIG4 136 aa9.68□□□□□ -0.86
CHMP1A-206ENST00000549139 ERG28Q9UKR5 140 aa9.68□□□□□ -0.86
CHMP1A-206ENST00000549139 DPM2O94777 84 aa9.67□□□□□ -0.86
CHMP1A-206ENST00000549139 PFN2P35080 140 aa9.67□□□□□ -0.86
CHMP1A-206ENST00000549139 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
CHMP1A-206ENST00000549139 IGKCP01834 107 aa9.66□□□□□ -0.86
CHMP1A-206ENST00000549139 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
CHMP1A-206ENST00000549139 SRSF9Q13242 221 aaKnown RBP eCLIP9.66□□□□□ -0.86
CHMP1A-206ENST00000549139 SYS1-DBNDD2H3BUS1 97 aa9.65□□□□□ -0.86
CHMP1A-206ENST00000549139 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
CHMP1A-206ENST00000549139 PMCHL2Q9BQD1 86 aa9.65□□□□□ -0.86
CHMP1A-206ENST00000549139 TP73-AS1Q9UF72 201 aa9.65□□□□□ -0.86
CHMP1A-206ENST00000549139 LEPROTO15243 131 aa9.64□□□□□ -0.87
CHMP1A-206ENST00000549139 UBE2BP63146 152 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms