RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 NDUFA1O15239 70 aa18.87■□□□□ 0.61
BRF1-213ENST00000548421 SFTA2Q6UW10 78 aa18.87■□□□□ 0.61
BRF1-213ENST00000548421 ZNF625Q96I27 306 aaPredicted RBP18.87■□□□□ 0.61
BRF1-213ENST00000548421 C14orf144Q96I85 54 aa18.87■□□□□ 0.61
BRF1-213ENST00000548421 RYR2Q92736 4967 aa18.87■□□□□ 0.61
BRF1-213ENST00000548421 MYMXA0A1B0GTQ4 84 aa18.86■□□□□ 0.61
BRF1-213ENST00000548421 A0A087WTM6 91 aa18.85■□□□□ 0.61
BRF1-213ENST00000548421 C2orf82Q6UX34 121 aa18.85■□□□□ 0.61
BRF1-213ENST00000548421 RYR3Q15413 4870 aa18.85■□□□□ 0.61
BRF1-213ENST00000548421 F8WDY8 70 aa18.84■□□□□ 0.61
BRF1-213ENST00000548421 CAMK2N2Q96S95 79 aa18.84■□□□□ 0.61
BRF1-213ENST00000548421 BOD1L2Q8IYS8 172 aa18.83■□□□□ 0.6
BRF1-213ENST00000548421 HERV-K104P63124 156 aa18.81■□□□□ 0.6
BRF1-213ENST00000548421 SLC25A34Q6PIV7 304 aa18.81■□□□□ 0.6
BRF1-213ENST00000548421 UNQ6190/PRO20217Q6UXQ8 127 aa18.81■□□□□ 0.6
BRF1-213ENST00000548421 DLEU1O43261 78 aa18.8■□□□□ 0.6
BRF1-213ENST00000548421 Q8N814 137 aa18.8■□□□□ 0.6
BRF1-213ENST00000548421 TNP2Q05952 138 aa18.79■□□□□ 0.6
BRF1-213ENST00000548421 C10orf25Q5T742 122 aa18.79■□□□□ 0.6
BRF1-213ENST00000548421 SYCNQ0VAF6 134 aa18.78■□□□□ 0.6
BRF1-213ENST00000548421 PRO1933Q9H354 126 aa18.78■□□□□ 0.6
BRF1-213ENST00000548421 TP73-AS1Q9UF72 201 aa18.78■□□□□ 0.6
BRF1-213ENST00000548421 SLPIP03973 132 aa18.77■□□□□ 0.6
BRF1-213ENST00000548421 Q6ZRU5 148 aa18.77■□□□□ 0.6
BRF1-213ENST00000548421 FAT2Q9NYQ8 4349 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.76■□□□□ 0.59
BRF1-213ENST00000548421 A0A0J9YXY3 114 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 TRBV30A0A0K0K1B3 111 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 EREGO14944 169 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 SCGB1D4Q6XE38 83 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 CARD19Q96LW7 228 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 UQCR10Q9UDW1 63 aa18.76■□□□□ 0.59
BRF1-213ENST00000548421 CNBPP62633 177 aaKnown RBP18.75■□□□□ 0.59
BRF1-213ENST00000548421 C6orf48Q9UBA6 75 aa18.75■□□□□ 0.59
BRF1-213ENST00000548421 TSTD3H0UI37 97 aa18.73■□□□□ 0.59
BRF1-213ENST00000548421 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.72■□□□□ 0.59
BRF1-213ENST00000548421 MEIG1Q5JSS6 88 aa18.72■□□□□ 0.59
BRF1-213ENST00000548421 ERG28Q9UKR5 140 aa18.71■□□□□ 0.59
BRF1-213ENST00000548421 LINC00587B1AMM8 73 aa18.7■□□□□ 0.58
BRF1-213ENST00000548421 RNF151Q2KHN1 245 aa18.7■□□□□ 0.58
BRF1-213ENST00000548421 C9orf116Q5BN46 136 aaPredicted RBP18.7■□□□□ 0.58
BRF1-213ENST00000548421 LINC00336Q6ZUF6 198 aa18.7■□□□□ 0.58
BRF1-213ENST00000548421 MIEN1Q9BRT3 115 aa18.69■□□□□ 0.58
BRF1-213ENST00000548421 HECTD4Q9Y4D8 3996 aa18.68■□□□□ 0.58
BRF1-213ENST00000548421 CIRBPQ14011 172 aaKnown RBP18.68■□□□□ 0.58
BRF1-213ENST00000548421 TIMM17BO60830 172 aa18.67■□□□□ 0.58
BRF1-213ENST00000548421 COX17Q14061 63 aa18.67■□□□□ 0.58
BRF1-213ENST00000548421 SMIM13P0DJ93 91 aa18.66■□□□□ 0.58
BRF1-213ENST00000548421 PFN2P35080 140 aa18.66■□□□□ 0.58
BRF1-213ENST00000548421 DNAH11Q96DT5 4516 aa18.65■□□□□ 0.58
BRF1-213ENST00000548421 C2orf91Q6ZV80 131 aa18.65■□□□□ 0.58
BRF1-213ENST00000548421 HIGD1BQ9P298 99 aa18.65■□□□□ 0.58
BRF1-213ENST00000548421 A0A0U1RRA0 63 aa18.64■□□□□ 0.57
BRF1-213ENST00000548421 TMEM238C9JI98 176 aa18.64■□□□□ 0.57
BRF1-213ENST00000548421 LINC00158P58513 81 aa18.64■□□□□ 0.57
BRF1-213ENST00000548421 LITAFQ99732 161 aa18.64■□□□□ 0.57
BRF1-213ENST00000548421 C9orf163Q8N9P6 203 aa18.61■□□□□ 0.57
BRF1-213ENST00000548421 HNRNPA3P51991 378 aaKnown RBP18.6■□□□□ 0.57
BRF1-213ENST00000548421 ADAMTSL4-AS1Q5T5F5 129 aa18.6■□□□□ 0.57
BRF1-213ENST00000548421 PKD1P98161 4303 aa18.6■□□□□ 0.57
BRF1-213ENST00000548421 NDUFC2-KCTD14E9PQ53 114 aa18.59■□□□□ 0.57
BRF1-213ENST00000548421 TLX1NBP0CAT3 122 aa18.59■□□□□ 0.57
BRF1-213ENST00000548421 SPANXB1Q9NS25 103 aaPredicted RBP18.58■□□□□ 0.57
BRF1-213ENST00000548421 IGLV5-52A0A0A0MRZ9 124 aa18.58■□□□□ 0.56
BRF1-213ENST00000548421 MIR7-3HGQ8N6C7 128 aa18.58■□□□□ 0.56
BRF1-213ENST00000548421 DAND5Q8N907 189 aa18.58■□□□□ 0.56
BRF1-213ENST00000548421 SPANXDQ9BXN6 97 aa18.58■□□□□ 0.56
BRF1-213ENST00000548421 SPANXCQ9NY87 97 aa18.58■□□□□ 0.56
BRF1-213ENST00000548421 LOC107984640A0A0U1RRK4 108 aa18.56■□□□□ 0.56
BRF1-213ENST00000548421 FUSP35637 526 aaKnown RBP eCLIP18.55■□□□□ 0.56
BRF1-213ENST00000548421 SRSF9Q13242 221 aaKnown RBP eCLIP18.55■□□□□ 0.56
BRF1-213ENST00000548421 Q6ZVH6 145 aa18.55■□□□□ 0.56
BRF1-213ENST00000548421 KRTAP10-2P60368 255 aa18.54■□□□□ 0.56
BRF1-213ENST00000548421 RPL18AQ02543 176 aaKnown RBP18.54■□□□□ 0.56
BRF1-213ENST00000548421 Q6ZRP5 223 aa18.54■□□□□ 0.56
BRF1-213ENST00000548421 PKIGQ9Y2B9 76 aa18.54■□□□□ 0.56
BRF1-213ENST00000548421 HIST1H4GQ99525 98 aa18.53■□□□□ 0.56
BRF1-213ENST00000548421 PGPEP1Q9NXJ5 209 aa18.52■□□□□ 0.56
BRF1-213ENST00000548421 DDTP30046 118 aa18.52■□□□□ 0.55
BRF1-213ENST00000548421 LINC01620Q4KN68 170 aa18.51■□□□□ 0.55
BRF1-213ENST00000548421 GAGE2EQ4V326 116 aa18.51■□□□□ 0.55
BRF1-213ENST00000548421 SND1-IT1Q9HBX3 110 aa18.51■□□□□ 0.55
BRF1-213ENST00000548421 GAGE2DQ9UEU5 116 aa18.51■□□□□ 0.55
BRF1-213ENST00000548421 DNAH5Q8TE73 4624 aa18.5■□□□□ 0.55
BRF1-213ENST00000548421 GCSHP23434 173 aa18.5■□□□□ 0.55
BRF1-213ENST00000548421 NPC2P61916 151 aa18.49■□□□□ 0.55
BRF1-213ENST00000548421 IFITM1P13164 125 aa18.48■□□□□ 0.55
BRF1-213ENST00000548421 GAGE2BQ13066 116 aa18.48■□□□□ 0.55
BRF1-213ENST00000548421 TAL2Q16559 108 aa18.48■□□□□ 0.55
BRF1-213ENST00000548421 SDIM1Q6ZPB5 146 aa18.48■□□□□ 0.55
BRF1-213ENST00000548421 LINC00308Q8TCZ7 52 aa18.48■□□□□ 0.55
BRF1-213ENST00000548421 HSD52Q0P140 79 aa18.47■□□□□ 0.55
BRF1-213ENST00000548421 COPS9Q8WXC6 57 aa18.47■□□□□ 0.55
BRF1-213ENST00000548421 PTTG1IPP53801 180 aa18.46■□□□□ 0.55
BRF1-213ENST00000548421 XAGE1AQ9HD64 81 aa18.46■□□□□ 0.55
BRF1-213ENST00000548421 C16orf90A8MZG2 172 aa18.46■□□□□ 0.54
BRF1-213ENST00000548421 A0A096LNI7 61 aa18.45■□□□□ 0.54
BRF1-213ENST00000548421 A0A1B0GVY2 172 aa18.45■□□□□ 0.54
BRF1-213ENST00000548421 CTAG1AP78358 180 aa18.45■□□□□ 0.54
BRF1-213ENST00000548421 SOSTDC1Q6X4U4 206 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms