RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 COLCA2A8K830 154 aa11.76□□□□□ -0.53
PRPF40B-206ENST00000547764 NDUFA6P56556 154 aa11.76□□□□□ -0.53
PRPF40B-206ENST00000547764 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
PRPF40B-206ENST00000547764 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
PRPF40B-206ENST00000547764 ATP5LO75964 103 aa11.75□□□□□ -0.53
PRPF40B-206ENST00000547764 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
PRPF40B-206ENST00000547764 Q6ZRP5 223 aa11.75□□□□□ -0.53
PRPF40B-206ENST00000547764 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
PRPF40B-206ENST00000547764 A0A1W2PNN7 141 aa11.74□□□□□ -0.53
PRPF40B-206ENST00000547764 CKS1BP61024 79 aa11.74□□□□□ -0.53
PRPF40B-206ENST00000547764 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
PRPF40B-206ENST00000547764 C9orf116Q5BN46 136 aaPredicted RBP11.73□□□□□ -0.53
PRPF40B-206ENST00000547764 BAGE3Q86Y29 109 aa11.73□□□□□ -0.53
PRPF40B-206ENST00000547764 SPINK8P0C7L1 97 aa11.72□□□□□ -0.53
PRPF40B-206ENST00000547764 HNRNPA3P51991 378 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-206ENST00000547764 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
PRPF40B-206ENST00000547764 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
PRPF40B-206ENST00000547764 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
PRPF40B-206ENST00000547764 NDUFC2-KCTD14E9PQ53 114 aa11.7□□□□□ -0.54
PRPF40B-206ENST00000547764 H3BRM9 83 aa11.7□□□□□ -0.54
PRPF40B-206ENST00000547764 HSBP1O75506 76 aa11.7□□□□□ -0.54
PRPF40B-206ENST00000547764 SCO1O75880 301 aa11.7□□□□□ -0.54
PRPF40B-206ENST00000547764 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
PRPF40B-206ENST00000547764 F8VRH5 84 aa11.69□□□□□ -0.54
PRPF40B-206ENST00000547764 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
PRPF40B-206ENST00000547764 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
PRPF40B-206ENST00000547764 CXCL5P42830 114 aa11.68□□□□□ -0.54
PRPF40B-206ENST00000547764 IFI27L1Q96BM0 104 aa11.68□□□□□ -0.54
PRPF40B-206ENST00000547764 FAM168BA1KXE4 195 aa11.67□□□□□ -0.54
PRPF40B-206ENST00000547764 SERF1AO75920 110 aa11.67□□□□□ -0.54
PRPF40B-206ENST00000547764 LINC00310P59036 64 aa11.67□□□□□ -0.54
PRPF40B-206ENST00000547764 C11orf86A6NJI1 115 aa11.66□□□□□ -0.54
PRPF40B-206ENST00000547764 PRR3P79522 188 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-206ENST00000547764 CHTOPQ9Y3Y2 248 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-206ENST00000547764 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-206ENST00000547764 DMBT1Q9UGM3 2413 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-206ENST00000547764 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 TRAV12-1A0A0B4J245 112 aa11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 KRTAP29-1A8MX34 341 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 C9orf129Q5T035 196 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 PHF5AQ7RTV0 110 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-206ENST00000547764 NUPR1O60356 82 aa11.63□□□□□ -0.55
PRPF40B-206ENST00000547764 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
PRPF40B-206ENST00000547764 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-206ENST00000547764 KRTAP7-1Q8IUC3 87 aa11.63□□□□□ -0.55
PRPF40B-206ENST00000547764 HERC1Q15751 4861 aa11.61□□□□□ -0.55
PRPF40B-206ENST00000547764 J3QL48 77 aa11.6□□□□□ -0.55
PRPF40B-206ENST00000547764 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
PRPF40B-206ENST00000547764 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
PRPF40B-206ENST00000547764 OXTP01178 125 aa11.58□□□□□ -0.56
PRPF40B-206ENST00000547764 PSORS1C2Q9UIG4 136 aa11.58□□□□□ -0.56
PRPF40B-206ENST00000547764 H0Y8G0 127 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 M0QXV9 152 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BKO60814 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BJP06899 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BOP23527 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BBP33778 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BDP58876 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BCP62807 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST2H2BEQ16778 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BHQ93079 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BNQ99877 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 HIST1H2BMQ99879 126 aa11.57□□□□□ -0.56
PRPF40B-206ENST00000547764 TMEM223A0PJW6 202 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 FABP4P15090 132 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 ODF1Q14990 250 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 KRTAP11-1Q8IUC1 163 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 HSPB8Q9UJY1 196 aa11.56□□□□□ -0.56
PRPF40B-206ENST00000547764 SRSF9Q13242 221 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRPF40B-206ENST00000547764 C1orf137Q5JT78 98 aa11.53□□□□□ -0.56
PRPF40B-206ENST00000547764 PFN2P35080 140 aa11.52□□□□□ -0.57
PRPF40B-206ENST00000547764 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
PRPF40B-206ENST00000547764 ZNF625Q96I27 306 aaPredicted RBP11.52□□□□□ -0.57
PRPF40B-206ENST00000547764 C22orf24Q9Y442 160 aa11.52□□□□□ -0.57
PRPF40B-206ENST00000547764 UBE2BP63146 152 aa11.51□□□□□ -0.57
PRPF40B-206ENST00000547764 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
PRPF40B-206ENST00000547764 ERG28Q9UKR5 140 aa11.51□□□□□ -0.57
PRPF40B-206ENST00000547764 PLNP26678 52 aa11.48□□□□□ -0.57
PRPF40B-206ENST00000547764 COX17Q14061 63 aa11.48□□□□□ -0.57
PRPF40B-206ENST00000547764 PMCHL2Q9BQD1 86 aa11.48□□□□□ -0.57
PRPF40B-206ENST00000547764 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
PRPF40B-206ENST00000547764 LBHQ53QV2 105 aaPredicted RBP11.47□□□□□ -0.57
PRPF40B-206ENST00000547764 MAP1LC3CQ9BXW4 147 aa11.47□□□□□ -0.57
PRPF40B-206ENST00000547764 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
PRPF40B-206ENST00000547764 DPM2O94777 84 aa11.46□□□□□ -0.57
PRPF40B-206ENST00000547764 IGLV7-43P04211 117 aa11.46□□□□□ -0.57
PRPF40B-206ENST00000547764 MRPL55Q7Z7F7 128 aaKnown RBP11.46□□□□□ -0.57
PRPF40B-206ENST00000547764 SND1-IT1Q9HBX3 110 aa11.46□□□□□ -0.57
PRPF40B-206ENST00000547764 IGKCP01834 107 aa11.44□□□□□ -0.58
PRPF40B-206ENST00000547764 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
PRPF40B-206ENST00000547764 S100A1P23297 94 aa11.44□□□□□ -0.58
PRPF40B-206ENST00000547764 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
PRPF40B-206ENST00000547764 LINC00158P58513 81 aa11.43□□□□□ -0.58
PRPF40B-206ENST00000547764 COA6Q5JTJ3 125 aaKnown RBP11.43□□□□□ -0.58
PRPF40B-206ENST00000547764 REG3GQ6UW15 175 aa11.43□□□□□ -0.58
PRPF40B-206ENST00000547764 LINC00167Q96N53 147 aa11.43□□□□□ -0.58
PRPF40B-206ENST00000547764 LINC01600Q96MT4 127 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms