RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 UNQ6190/PRO20217Q6UXQ8 127 aa11.21□□□□□ -0.61
CD9-211ENST00000546073 SMIM1B2RUZ4 78 aa11.2□□□□□ -0.62
CD9-211ENST00000546073 SFTA2Q6UW10 78 aa11.2□□□□□ -0.62
CD9-211ENST00000546073 C7orf33Q8WU49 177 aa11.2□□□□□ -0.62
CD9-211ENST00000546073 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.2□□□□□ -0.62
CD9-211ENST00000546073 KIAA0087Q14695 138 aa11.19□□□□□ -0.62
CD9-211ENST00000546073 STPG4Q8N801 248 aa11.19□□□□□ -0.62
CD9-211ENST00000546073 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
CD9-211ENST00000546073 A0A096LNI7 61 aa11.18□□□□□ -0.62
CD9-211ENST00000546073 CHTF8P0CG12 524 aa11.18□□□□□ -0.62
CD9-211ENST00000546073 ZNF22P17026 224 aaPredicted RBP11.18□□□□□ -0.62
CD9-211ENST00000546073 PLNP26678 52 aa11.18□□□□□ -0.62
CD9-211ENST00000546073 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
CD9-211ENST00000546073 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
CD9-211ENST00000546073 A0A087WYN8 130 aa11.17□□□□□ -0.62
CD9-211ENST00000546073 Q5VSD8 79 aa11.17□□□□□ -0.62
CD9-211ENST00000546073 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
CD9-211ENST00000546073 C6orf48Q9UBA6 75 aa11.17□□□□□ -0.62
CD9-211ENST00000546073 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
CD9-211ENST00000546073 HERVK_113P61574 105 aa11.16□□□□□ -0.62
CD9-211ENST00000546073 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
CD9-211ENST00000546073 GAGE2EQ4V326 116 aa11.16□□□□□ -0.62
CD9-211ENST00000546073 GAGE2DQ9UEU5 116 aa11.16□□□□□ -0.62
CD9-211ENST00000546073 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
CD9-211ENST00000546073 NUPR1O60356 82 aa11.15□□□□□ -0.62
CD9-211ENST00000546073 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
CD9-211ENST00000546073 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
CD9-211ENST00000546073 DPM2O94777 84 aa11.14□□□□□ -0.63
CD9-211ENST00000546073 S100A6P06703 90 aa11.14□□□□□ -0.63
CD9-211ENST00000546073 LINC00310P59036 64 aa11.14□□□□□ -0.63
CD9-211ENST00000546073 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
CD9-211ENST00000546073 PLAC8Q9NZF1 115 aa11.13□□□□□ -0.63
CD9-211ENST00000546073 ODF1Q14990 250 aa11.12□□□□□ -0.63
CD9-211ENST00000546073 IGKCP01834 107 aa11.11□□□□□ -0.63
CD9-211ENST00000546073 S100A2P29034 98 aa11.11□□□□□ -0.63
CD9-211ENST00000546073 RPL37AP61513 92 aaKnown RBP11.11□□□□□ -0.63
CD9-211ENST00000546073 IGLV5-39A0A0G2JS06 123 aa11.1□□□□□ -0.63
CD9-211ENST00000546073 C20orf202A1L168 122 aa11.1□□□□□ -0.63
CD9-211ENST00000546073 PANO1I0J062 215 aa11.1□□□□□ -0.63
CD9-211ENST00000546073 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
CD9-211ENST00000546073 LRP1BQ9NZR2 4599 aa11.09□□□□□ -0.63
CD9-211ENST00000546073 TMEM223A0PJW6 202 aa11.09□□□□□ -0.63
CD9-211ENST00000546073 LINC00587B1AMM8 73 aa11.09□□□□□ -0.63
CD9-211ENST00000546073 AKR1D1P51857 326 aa11.09□□□□□ -0.63
CD9-211ENST00000546073 C9orf116Q5BN46 136 aaPredicted RBP11.09□□□□□ -0.63
CD9-211ENST00000546073 Q6ZRP5 223 aa11.09□□□□□ -0.63
CD9-211ENST00000546073 SYS1-DBNDD2H3BUS1 97 aa11.08□□□□□ -0.64
CD9-211ENST00000546073 PET117Q6UWS5 81 aa11.08□□□□□ -0.64
CD9-211ENST00000546073 KIAA1109Q2LD37 5005 aa11.07□□□□□ -0.64
CD9-211ENST00000546073 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
CD9-211ENST00000546073 PLEKHB2Q96CS7 222 aa11.07□□□□□ -0.64
CD9-211ENST00000546073 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
CD9-211ENST00000546073 PFN2P35080 140 aa11.06□□□□□ -0.64
CD9-211ENST00000546073 KRTDAPP60985 99 aa11.06□□□□□ -0.64
CD9-211ENST00000546073 COX17Q14061 63 aa11.06□□□□□ -0.64
CD9-211ENST00000546073 MYMXA0A1B0GTQ4 84 aa11.05□□□□□ -0.64
CD9-211ENST00000546073 HERV-K104P63124 156 aa11.05□□□□□ -0.64
CD9-211ENST00000546073 LGALS3P17931 250 aaKnown RBP11.04□□□□□ -0.64
CD9-211ENST00000546073 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
CD9-211ENST00000546073 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
CD9-211ENST00000546073 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
CD9-211ENST00000546073 ERG28Q9UKR5 140 aa11.04□□□□□ -0.64
CD9-211ENST00000546073 LEPROTO15243 131 aa11.03□□□□□ -0.64
CD9-211ENST00000546073 LINC00158P58513 81 aa11.03□□□□□ -0.64
CD9-211ENST00000546073 LBHQ53QV2 105 aaPredicted RBP11.03□□□□□ -0.64
CD9-211ENST00000546073 ZNF625Q96I27 306 aaPredicted RBP11.03□□□□□ -0.64
CD9-211ENST00000546073 UBE2BP63146 152 aa11.02□□□□□ -0.65
CD9-211ENST00000546073 XAGE1AQ9HD64 81 aa11.02□□□□□ -0.65
CD9-211ENST00000546073 NDUFA12Q9UI09 145 aa11.02□□□□□ -0.65
CD9-211ENST00000546073 A0A1W2PNN7 141 aa11.01□□□□□ -0.65
CD9-211ENST00000546073 NMUP48645 174 aa11.01□□□□□ -0.65
CD9-211ENST00000546073 M0QXV9 152 aa11□□□□□ -0.65
CD9-211ENST00000546073 C3orf79P0CE67 100 aa11□□□□□ -0.65
CD9-211ENST00000546073 RYR1P21817 5038 aa11□□□□□ -0.65
CD9-211ENST00000546073 J3QQQ9 107 aa10.99□□□□□ -0.65
CD9-211ENST00000546073 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
CD9-211ENST00000546073 LINC01545Q5VT33 79 aa10.99□□□□□ -0.65
CD9-211ENST00000546073 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
CD9-211ENST00000546073 HERC2O95714 4834 aa10.97□□□□□ -0.65
CD9-211ENST00000546073 C9orf129Q5T035 196 aaKnown RBP10.97□□□□□ -0.65
CD9-211ENST00000546073 PHF5AQ7RTV0 110 aaKnown RBP10.97□□□□□ -0.65
CD9-211ENST00000546073 FAM168BA1KXE4 195 aa10.96□□□□□ -0.65
CD9-211ENST00000546073 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
CD9-211ENST00000546073 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
CD9-211ENST00000546073 E9PLD3 99 aa10.95□□□□□ -0.66
CD9-211ENST00000546073 KRTAP4-5Q9BYR2 181 aa10.95□□□□□ -0.66
CD9-211ENST00000546073 HIST3H2BBQ8N257 126 aa10.94□□□□□ -0.66
CD9-211ENST00000546073 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
CD9-211ENST00000546073 HSBP1L1C9JCN9 74 aa10.93□□□□□ -0.66
CD9-211ENST00000546073 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
CD9-211ENST00000546073 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
CD9-211ENST00000546073 TP73-AS1Q9UF72 201 aa10.93□□□□□ -0.66
CD9-211ENST00000546073 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
CD9-211ENST00000546073 HSPG2P98160 4391 aa10.92□□□□□ -0.66
CD9-211ENST00000546073 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
CD9-211ENST00000546073 SNRPEP62304 92 aaKnown RBP10.92□□□□□ -0.66
CD9-211ENST00000546073 PRR3P79522 188 aaKnown RBP10.92□□□□□ -0.66
CD9-211ENST00000546073 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
CD9-211ENST00000546073 C1orf137Q5JT78 98 aa10.91□□□□□ -0.66
CD9-211ENST00000546073 HIST1H2BLQ99880 126 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms