RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ODF1Q14990 250 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 C2orf82Q6UX34 121 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 UNQ6190/PRO20217Q6UXQ8 127 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 C3orf79P0CE67 100 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 SNRPEP62304 92 aaKnown RBP4.07□□□□□ -1.76
LTBR-212ENST00000543542 HAMPP81172 84 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 KIAA0087Q14695 138 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 RNF151Q2KHN1 245 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 MAJINQ3KP22 176 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 PET117Q6UWS5 81 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 HIST3H2BBQ8N257 126 aa4.07□□□□□ -1.76
LTBR-212ENST00000543542 BIRC6Q9NR09 4857 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 TMEM223A0PJW6 202 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 CDK2AP2O75956 126 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 CHTF8P0CG12 524 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 GAGE2EQ4V326 116 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 SDIM1Q6ZPB5 146 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 FAM30AQ9NZY2 134 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 LINC00474Q9P2X8 69 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 C6orf48Q9UBA6 75 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 GAGE2DQ9UEU5 116 aa4.06□□□□□ -1.76
LTBR-212ENST00000543542 TMA7Q9Y2S6 64 aaKnown RBP4.06□□□□□ -1.76
LTBR-212ENST00000543542 A0A096LNI7 61 aa4.05□□□□□ -1.76
LTBR-212ENST00000543542 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
LTBR-212ENST00000543542 C9orf116Q5BN46 136 aaPredicted RBP4.05□□□□□ -1.76
LTBR-212ENST00000543542 STPG4Q8N801 248 aa4.05□□□□□ -1.76
LTBR-212ENST00000543542 ZNF625Q96I27 306 aaPredicted RBP4.05□□□□□ -1.76
LTBR-212ENST00000543542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.05□□□□□ -1.76
LTBR-212ENST00000543542 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 IGLV5-39A0A0G2JS06 123 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 NDUFC2-KCTD14E9PQ53 114 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 LEPROTO15243 131 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 SMR3BP02814 79 aaPredicted RBP4.04□□□□□ -1.76
LTBR-212ENST00000543542 PFN2P35080 140 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 AKR1D1P51857 326 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 PTTG1IPP53801 180 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 XGP55808 180 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 MEIG1Q5JSS6 88 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 LINC01545Q5VT33 79 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 SPACA4Q8TDM5 124 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 PLEKHB2Q96CS7 222 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 HIST1H2BLQ99880 126 aa4.04□□□□□ -1.76
LTBR-212ENST00000543542 A0A087WYN8 130 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 A0A0U1RRA0 63 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 C5orf52A6NGY3 159 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 FAM229AH3BQW9 127 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 PANO1I0J062 215 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 J3QQQ9 107 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 SCGB1D1O95968 90 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 TLX1NBP0CAT3 122 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 LINC00158P58513 81 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 Q6ZRP5 223 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 Q6ZSA8 131 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 NDUFA12Q9UI09 145 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
LTBR-212ENST00000543542 HSBP1L1C9JCN9 74 aa4.02□□□□□ -1.77
LTBR-212ENST00000543542 HERV-K104P63124 156 aa4.02□□□□□ -1.77
LTBR-212ENST00000543542 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
LTBR-212ENST00000543542 C7orf33Q8WU49 177 aa4.02□□□□□ -1.77
LTBR-212ENST00000543542 XAGE1AQ9HD64 81 aa4.02□□□□□ -1.77
LTBR-212ENST00000543542 ERG28Q9UKR5 140 aa4.02□□□□□ -1.77
LTBR-212ENST00000543542 APOBP04114 4563 aaKnown RBP4.02□□□□□ -1.77
LTBR-212ENST00000543542 LINC00587B1AMM8 73 aa4.01□□□□□ -1.77
LTBR-212ENST00000543542 E9PLD3 99 aa4.01□□□□□ -1.77
LTBR-212ENST00000543542 NMUP48645 174 aa4.01□□□□□ -1.77
LTBR-212ENST00000543542 CIRBPQ14011 172 aaKnown RBP4.01□□□□□ -1.77
LTBR-212ENST00000543542 COX17Q14061 63 aa4.01□□□□□ -1.77
LTBR-212ENST00000543542 LINC00528Q8N1L1 170 aa4.01□□□□□ -1.77
LTBR-212ENST00000543542 RYR1P21817 5038 aa4□□□□□ -1.77
LTBR-212ENST00000543542 EPM2AB3EWF7 344 aa4□□□□□ -1.77
LTBR-212ENST00000543542 SMIM13P0DJ93 91 aa4□□□□□ -1.77
LTBR-212ENST00000543542 TSPEAR-AS2P59090 65 aa4□□□□□ -1.77
LTBR-212ENST00000543542 Q5VSD8 79 aa4□□□□□ -1.77
LTBR-212ENST00000543542 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
LTBR-212ENST00000543542 KIAA1109Q2LD37 5005 aa4□□□□□ -1.77
LTBR-212ENST00000543542 A0A1W2PNN7 141 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 FAM168BA1KXE4 195 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 ZNF815PA8K554 130 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 M0QXV9 152 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 PLA2G1BP04054 148 aaKnown RBP3.99□□□□□ -1.77
LTBR-212ENST00000543542 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
LTBR-212ENST00000543542 UBE2BP63146 152 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
LTBR-212ENST00000543542 SCGB1D4Q6XE38 83 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 Q8N1X5 172 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 NKAPP1Q8N9T2 125 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 MIEN1Q9BRT3 115 aa3.99□□□□□ -1.77
LTBR-212ENST00000543542 IGKV2D-26A0A0A0MRZ7 120 aa3.98□□□□□ -1.77
LTBR-212ENST00000543542 RPL24P83731 157 aaKnown RBP3.98□□□□□ -1.77
LTBR-212ENST00000543542 ANKRD39Q53RE8 183 aa3.98□□□□□ -1.77
LTBR-212ENST00000543542 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
LTBR-212ENST00000543542 MIR7-3HGQ8N6C7 128 aa3.98□□□□□ -1.77
LTBR-212ENST00000543542 SND1-IT1Q9HBX3 110 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms