RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.74
RAP1B-229ENST00000543393 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
RAP1B-229ENST00000543393 A0A1B0GW15 77 aa10.38□□□□□ -0.75
RAP1B-229ENST00000543393 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
RAP1B-229ENST00000543393 BLOC1S1P78537 153 aa10.38□□□□□ -0.75
RAP1B-229ENST00000543393 KRTAP3-3Q9BYR6 98 aa10.38□□□□□ -0.75
RAP1B-229ENST00000543393 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
RAP1B-229ENST00000543393 KRTAP13-3Q3SY46 172 aa10.37□□□□□ -0.75
RAP1B-229ENST00000543393 FP248Q71RG6 208 aaPredicted RBP10.37□□□□□ -0.75
RAP1B-229ENST00000543393 C3orf22Q8N5N4 141 aa10.37□□□□□ -0.75
RAP1B-229ENST00000543393 F8W036 122 aa10.36□□□□□ -0.75
RAP1B-229ENST00000543393 PPBPP02775 128 aa10.36□□□□□ -0.75
RAP1B-229ENST00000543393 AMELXQ99217 191 aa10.36□□□□□ -0.75
RAP1B-229ENST00000543393 IGLV5-37A0A075B6J1 123 aa10.35□□□□□ -0.75
RAP1B-229ENST00000543393 SRP19P09132 144 aaKnown RBP10.35□□□□□ -0.75
RAP1B-229ENST00000543393 PRLHP81277 87 aa10.35□□□□□ -0.75
RAP1B-229ENST00000543393 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
RAP1B-229ENST00000543393 VCX2Q9H322 139 aa10.35□□□□□ -0.75
RAP1B-229ENST00000543393 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
RAP1B-229ENST00000543393 FAM19A3Q7Z5A8 133 aa10.34□□□□□ -0.75
RAP1B-229ENST00000543393 NKAPP1Q8N9T2 125 aa10.34□□□□□ -0.75
RAP1B-229ENST00000543393 CDKN2A-AS1Q9UH64 79 aa10.34□□□□□ -0.75
RAP1B-229ENST00000543393 IGKV2-28A0A075B6P5 120 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 IGKV2D-28P01615 120 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 CXCL5P42830 114 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 SEC61BP60468 96 aaKnown RBP10.33□□□□□ -0.76
RAP1B-229ENST00000543393 RPL23P62829 140 aaKnown RBP10.33□□□□□ -0.76
RAP1B-229ENST00000543393 SPAG11AQ6PDA7 123 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 ORMDL3Q8N138 153 aa10.33□□□□□ -0.76
RAP1B-229ENST00000543393 SCO1O75880 301 aa10.32□□□□□ -0.76
RAP1B-229ENST00000543393 S100A8P05109 93 aa10.32□□□□□ -0.76
RAP1B-229ENST00000543393 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
RAP1B-229ENST00000543393 PRELID3AQ96N28 172 aa10.32□□□□□ -0.76
RAP1B-229ENST00000543393 CYSLTR1Q9Y271 337 aa10.32□□□□□ -0.76
RAP1B-229ENST00000543393 A0A1B0GXF2 115 aa10.31□□□□□ -0.76
RAP1B-229ENST00000543393 HERVK_113P63121 156 aa10.31□□□□□ -0.76
RAP1B-229ENST00000543393 ADIRFQ15847 76 aa10.31□□□□□ -0.76
RAP1B-229ENST00000543393 LOC389332A0A1B0GUA5 103 aa10.3□□□□□ -0.76
RAP1B-229ENST00000543393 FAM19A1Q7Z5A9 133 aa10.3□□□□□ -0.76
RAP1B-229ENST00000543393 PLEKHB2Q96CS7 222 aa10.3□□□□□ -0.76
RAP1B-229ENST00000543393 SEC11AP67812 179 aa10.29□□□□□ -0.76
RAP1B-229ENST00000543393 TCTE3Q8IZS6 198 aa10.29□□□□□ -0.76
RAP1B-229ENST00000543393 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
RAP1B-229ENST00000543393 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
RAP1B-229ENST00000543393 PRSS47A8MTI9 375 aa10.28□□□□□ -0.76
RAP1B-229ENST00000543393 RAB5BP61020 215 aa10.28□□□□□ -0.76
RAP1B-229ENST00000543393 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
RAP1B-229ENST00000543393 NPSP0C0P6 89 aa10.27□□□□□ -0.77
RAP1B-229ENST00000543393 TMEM126AQ9H061 195 aa10.27□□□□□ -0.77
RAP1B-229ENST00000543393 TMEM238C9JI98 176 aa10.26□□□□□ -0.77
RAP1B-229ENST00000543393 C4orf48Q5BLP8 95 aa10.26□□□□□ -0.77
RAP1B-229ENST00000543393 MAP1LC3AQ9H492 121 aa10.26□□□□□ -0.77
RAP1B-229ENST00000543393 SMIM1B2RUZ4 78 aa10.25□□□□□ -0.77
RAP1B-229ENST00000543393 CBLN2Q8IUK8 224 aa10.25□□□□□ -0.77
RAP1B-229ENST00000543393 COX7B2Q8TF08 81 aa10.25□□□□□ -0.77
RAP1B-229ENST00000543393 NAT8Q9UHE5 227 aa10.25□□□□□ -0.77
RAP1B-229ENST00000543393 Q8N8P6 123 aa10.24□□□□□ -0.77
RAP1B-229ENST00000543393 M0R378 163 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 GNB1LQ9BYB4 327 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 LAMTOR2Q9Y2Q5 125 aa10.22□□□□□ -0.77
RAP1B-229ENST00000543393 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
RAP1B-229ENST00000543393 DAND5Q8N907 189 aa10.21□□□□□ -0.77
RAP1B-229ENST00000543393 VPREB1P12018 145 aa10.2□□□□□ -0.78
RAP1B-229ENST00000543393 MT1HP80294 61 aa10.2□□□□□ -0.78
RAP1B-229ENST00000543393 Q8NBF4 154 aa10.2□□□□□ -0.78
RAP1B-229ENST00000543393 SPRR4Q96PI1 79 aa10.2□□□□□ -0.78
RAP1B-229ENST00000543393 C9JQL5 133 aa10.19□□□□□ -0.78
RAP1B-229ENST00000543393 ATP5L2Q7Z4Y8 100 aa10.19□□□□□ -0.78
RAP1B-229ENST00000543393 KRTAP19-2Q3LHN2 52 aa10.18□□□□□ -0.78
RAP1B-229ENST00000543393 TIMM17AQ99595 171 aa10.18□□□□□ -0.78
RAP1B-229ENST00000543393 K7EMI3 77 aa10.17□□□□□ -0.78
RAP1B-229ENST00000543393 SPINK1P00995 79 aa10.17□□□□□ -0.78
RAP1B-229ENST00000543393 CFC1BP0CG36 223 aa10.17□□□□□ -0.78
RAP1B-229ENST00000543393 A0A1B0GVG6 124 aa10.16□□□□□ -0.78
RAP1B-229ENST00000543393 SPINK8P0C7L1 97 aa10.16□□□□□ -0.78
RAP1B-229ENST00000543393 PFN2P35080 140 aa10.16□□□□□ -0.78
RAP1B-229ENST00000543393 IGLV5-45A0A087WSX0 123 aa10.15□□□□□ -0.78
RAP1B-229ENST00000543393 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
RAP1B-229ENST00000543393 ATP5LO75964 103 aa10.15□□□□□ -0.78
RAP1B-229ENST00000543393 XP32Q5T750 250 aa10.15□□□□□ -0.78
RAP1B-229ENST00000543393 TOMM6Q96B49 74 aa10.14□□□□□ -0.79
RAP1B-229ENST00000543393 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
RAP1B-229ENST00000543393 RPL24P83731 157 aaKnown RBP10.13□□□□□ -0.79
RAP1B-229ENST00000543393 Q8NDZ9 215 aa10.13□□□□□ -0.79
RAP1B-229ENST00000543393 SND1-IT1Q9HBX3 110 aa10.13□□□□□ -0.79
RAP1B-229ENST00000543393 NXT2Q9NPJ8 142 aaKnown RBP10.13□□□□□ -0.79
RAP1B-229ENST00000543393 ZNF706Q9Y5V0 76 aaPredicted RBP10.13□□□□□ -0.79
RAP1B-229ENST00000543393 G0S2P27469 103 aa10.12□□□□□ -0.79
RAP1B-229ENST00000543393 RAB14P61106 215 aa10.12□□□□□ -0.79
RAP1B-229ENST00000543393 LORP23490 312 aaPredicted RBP10.11□□□□□ -0.79
RAP1B-229ENST00000543393 ERASQ7Z444 233 aa10.11□□□□□ -0.79
RAP1B-229ENST00000543393 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
RAP1B-229ENST00000543393 ADCYAP1P18509 176 aa10.09□□□□□ -0.79
RAP1B-229ENST00000543393 Q8N377 158 aa10.09□□□□□ -0.79
RAP1B-229ENST00000543393 FAM19A2Q8N3H0 131 aa10.09□□□□□ -0.79
RAP1B-229ENST00000543393 KRTAP10-6P60371 365 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms