RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 PLNP26678 52 aa7.42□□□□□ -1.22
PTPN6-219ENST00000542848 TEX43Q6ZNM6 134 aa7.42□□□□□ -1.22
PTPN6-219ENST00000542848 TMEM101Q96IK0 257 aa7.42□□□□□ -1.22
PTPN6-219ENST00000542848 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
PTPN6-219ENST00000542848 LRP2P98164 4655 aa7.42□□□□□ -1.22
PTPN6-219ENST00000542848 IGHV1-58A0A0C4DH39 117 aa7.41□□□□□ -1.22
PTPN6-219ENST00000542848 H0Y8G0 127 aa7.41□□□□□ -1.22
PTPN6-219ENST00000542848 RPL39P62891 51 aaKnown RBP7.41□□□□□ -1.22
PTPN6-219ENST00000542848 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
PTPN6-219ENST00000542848 PMVKQ15126 192 aa7.41□□□□□ -1.22
PTPN6-219ENST00000542848 SPINK6Q6UWN8 80 aa7.41□□□□□ -1.22
PTPN6-219ENST00000542848 LINC00959A0A1B0GUT2 108 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 HSBP1L1C9JCN9 74 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 F8VRH5 84 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 XCL1P47992 114 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 ODF1Q14990 250 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 VAMP8Q9BV40 100 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 UBE2D4Q9Y2X8 147 aa7.4□□□□□ -1.22
PTPN6-219ENST00000542848 IGLV4-3A0A075B6K6 122 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 A0A0J9YXV3 536 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 CCL25O15444 150 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 DPM2O94777 84 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 KRTAP10-8P60410 259 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 SS18Q15532 418 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 REG3GQ6UW15 175 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 VCX2Q9H322 139 aa7.39□□□□□ -1.23
PTPN6-219ENST00000542848 IGKCP01834 107 aa7.38□□□□□ -1.23
PTPN6-219ENST00000542848 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
PTPN6-219ENST00000542848 CD164L2Q6UWJ8 174 aa7.38□□□□□ -1.23
PTPN6-219ENST00000542848 CARD19Q96LW7 228 aa7.38□□□□□ -1.23
PTPN6-219ENST00000542848 CDC42SE2Q9NRR3 84 aa7.38□□□□□ -1.23
PTPN6-219ENST00000542848 CHTOPQ9Y3Y2 248 aaKnown RBP7.38□□□□□ -1.23
PTPN6-219ENST00000542848 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 SEC11AP67812 179 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 SYCNQ0VAF6 134 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 Q6ZRP5 223 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 LINC00526Q96FQ7 95 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 AMELXQ99217 191 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 CST9LQ9H4G1 147 aa7.37□□□□□ -1.23
PTPN6-219ENST00000542848 TSTD3H0UI37 97 aa7.36□□□□□ -1.23
PTPN6-219ENST00000542848 Q6ZUT4 128 aa7.36□□□□□ -1.23
PTPN6-219ENST00000542848 ZNF664Q8N3J9 261 aa7.36□□□□□ -1.23
PTPN6-219ENST00000542848 MRPL35Q9NZE8 188 aaKnown RBP7.36□□□□□ -1.23
PTPN6-219ENST00000542848 PTTG1IPP53801 180 aa7.35□□□□□ -1.23
PTPN6-219ENST00000542848 LOC107984640A0A0U1RRK4 108 aa7.34□□□□□ -1.23
PTPN6-219ENST00000542848 IGLC3P0DOY3 106 aa7.34□□□□□ -1.23
PTPN6-219ENST00000542848 HERVK_113P61574 105 aa7.34□□□□□ -1.23
PTPN6-219ENST00000542848 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
PTPN6-219ENST00000542848 PMCHL2Q9BQD1 86 aa7.34□□□□□ -1.23
PTPN6-219ENST00000542848 IGLV4-69A0A075B6H9 119 aa7.33□□□□□ -1.24
PTPN6-219ENST00000542848 MALP21145 153 aa7.33□□□□□ -1.24
PTPN6-219ENST00000542848 FAM19A3Q7Z5A8 133 aa7.33□□□□□ -1.24
PTPN6-219ENST00000542848 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
PTPN6-219ENST00000542848 PAM16Q9Y3D7 125 aa7.33□□□□□ -1.24
PTPN6-219ENST00000542848 TINCRA0A1B0GVN0 87 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 C11orf86A6NJI1 115 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 COX7A2LO14548 114 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 HERVK_113P63121 156 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 RNF213Q63HN8 5207 aa7.32□□□□□ -1.24
PTPN6-219ENST00000542848 H3BRM9 83 aa7.31□□□□□ -1.24
PTPN6-219ENST00000542848 UBE2D1P51668 147 aa7.31□□□□□ -1.24
PTPN6-219ENST00000542848 ZC2HC1BQ5TFG8 222 aa7.31□□□□□ -1.24
PTPN6-219ENST00000542848 C2orf48Q96LS8 159 aa7.31□□□□□ -1.24
PTPN6-219ENST00000542848 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
PTPN6-219ENST00000542848 GEMIN7Q9H840 131 aaKnown RBP7.31□□□□□ -1.24
PTPN6-219ENST00000542848 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
PTPN6-219ENST00000542848 FAM104AQ969W3 186 aa7.3□□□□□ -1.24
PTPN6-219ENST00000542848 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
PTPN6-219ENST00000542848 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
PTPN6-219ENST00000542848 APOMO95445 188 aa7.29□□□□□ -1.24
PTPN6-219ENST00000542848 RNF151Q2KHN1 245 aa7.29□□□□□ -1.24
PTPN6-219ENST00000542848 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
PTPN6-219ENST00000542848 UQCR10Q9UDW1 63 aa7.29□□□□□ -1.24
PTPN6-219ENST00000542848 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
PTPN6-219ENST00000542848 E9PLD3 99 aa7.28□□□□□ -1.24
PTPN6-219ENST00000542848 ZNF22P17026 224 aaPredicted RBP7.28□□□□□ -1.24
PTPN6-219ENST00000542848 C9orf116Q5BN46 136 aaPredicted RBP7.28□□□□□ -1.24
PTPN6-219ENST00000542848 RNASE13Q5GAN3 156 aaKnown RBP7.28□□□□□ -1.24
PTPN6-219ENST00000542848 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
PTPN6-219ENST00000542848 DLEU1O43261 78 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 COX8AP10176 69 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 C5orf38Q86SI9 138 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 LINC00469Q8N7U9 141 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 MIEN1Q9BRT3 115 aa7.27□□□□□ -1.25
PTPN6-219ENST00000542848 TMEM223A0PJW6 202 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 F8WDY8 70 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 NMUP48645 174 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 RPL18AQ02543 176 aaKnown RBP7.26□□□□□ -1.25
PTPN6-219ENST00000542848 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 LINC00242Q5T6M2 205 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
PTPN6-219ENST00000542848 DDTP30046 118 aa7.25□□□□□ -1.25
PTPN6-219ENST00000542848 SPAG11BQ08648 103 aa7.25□□□□□ -1.25
PTPN6-219ENST00000542848 C1orf137Q5JT78 98 aa7.25□□□□□ -1.25
PTPN6-219ENST00000542848 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
PTPN6-219ENST00000542848 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
PTPN6-219ENST00000542848 PRO1933Q9H354 126 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms