RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 TMEM126AQ9H061 195 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 RNASE7Q9H1E1 156 aaKnown RBP3.63□□□□□ -1.83
CPSF7-220ENST00000541963 GTSF1LQ9H1H1 148 aa3.63□□□□□ -1.83
CPSF7-220ENST00000541963 K7EMI3 77 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 M0R381 172 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 APOMO95445 188 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 LELP1Q5T871 98 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 FAM74A4Q5TZK3 123 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 SPANXN1Q5VSR9 72 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 PPDPFLQ8WWR9 84 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
CPSF7-220ENST00000541963 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
CPSF7-220ENST00000541963 TRBV10-1A0A0K0K1A3 114 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 LOC100131303A0A0U1RQF7 123 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 C19orf71A6NCJ1 209 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 LINC01546A6NGU7 62 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 CRYGDP07320 174 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 SPINK8P0C7L1 97 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 CACNG7P62955 275 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 Q1RN00 199 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 Q6ZVH6 145 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 ORMDL3Q8N138 153 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 IFI27L1Q96BM0 104 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 MAP1LC3AQ9H492 121 aa3.61□□□□□ -1.83
CPSF7-220ENST00000541963 SNAI2O43623 268 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 PLNP26678 52 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 LINC00315P59091 139 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 LINC01620Q4KN68 170 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 LINC01556Q5JQF7 62 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 TEN1Q86WV5 123 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 WFDC10BQ8IUB3 73 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 CEND1Q8N111 149 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 CHAC1Q9BUX1 264 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 DNAH2Q9P225 4427 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 DNAH17Q9UFH2 4485 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 FRAS1Q86XX4 4008 aa3.6□□□□□ -1.83
CPSF7-220ENST00000541963 TRBV7-3A0A075B6L6 115 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 C16orf90A8MZG2 172 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 H7C1H1 209 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 PSCAO43653 123 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 DPM2O94777 84 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 RPL32P62910 135 aaKnown RBP3.59□□□□□ -1.83
CPSF7-220ENST00000541963 ZNF56Q15929 161 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 Q6ZUT4 128 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 C14orf178Q8N769 122 aaPredicted RBP3.59□□□□□ -1.83
CPSF7-220ENST00000541963 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
CPSF7-220ENST00000541963 TRAV8-3A0A0A6YYJ7 113 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 FAM240AA0A1B0GVK7 77 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IBA57-AS1B1ANH7 110 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 SNCGO76070 127 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IGHV3-30P01768 117 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IGHV3-33P01772 117 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IGKCP01834 107 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IGHV3-30-3P0DP02 117 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IGHV3-30-5P0DP03 117 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 DAZ4Q86SG3 579 aaKnown RBP3.58□□□□□ -1.84
CPSF7-220ENST00000541963 TYMSOSQ8TAI1 123 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 RAB37Q96AX2 223 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 RMI2Q96E14 147 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 DNAJC30Q96LL9 226 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 CHCHD7Q9BUK0 85 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 IMUPQ9GZP8 106 aa3.58□□□□□ -1.84
CPSF7-220ENST00000541963 DAZ3Q9NR90 486 aaKnown RBP3.58□□□□□ -1.84
CPSF7-220ENST00000541963 A0A087WX48 190 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 MGPP08493 103 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 IGLC6P0CF74 106 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 SCGB1C2P0DMR2 95 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 FCER1GP30273 86 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 NMUP48645 174 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 DSCR10P59022 87 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 UBE2D3P61077 147 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 UBE2D2P62837 147 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 CXCL6P80162 114 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 LAGE3Q14657 143 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 ETDBQ3ZM63 59 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 FAM104BQ5XKR9 115 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 LYZL1Q6UWQ5 148 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 PRELID3AQ96N28 172 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 DPH3P1Q9H4G8 78 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 NHP2Q9NX24 153 aaKnown RBP3.57□□□□□ -1.84
CPSF7-220ENST00000541963 FAT2Q9NYQ8 4349 aa3.57□□□□□ -1.84
CPSF7-220ENST00000541963 TRBV25-1A0A075B6N4 114 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 A0A087WTM6 91 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 TRBV6-8A0A0A6YYG3 113 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 PPP1R17O96001 155 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 ACYP1P07311 99 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 IFITM1P13164 125 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 Q6ZRN7 208 aaPredicted RBP3.56□□□□□ -1.84
CPSF7-220ENST00000541963 PGLYRP4Q96LB8 373 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 HIST1H4GQ99525 98 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 PPDPFQ9H3Y8 114 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 TP73-AS1Q9UF72 201 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
CPSF7-220ENST00000541963 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms