RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 TMEM141Q96I45 108 aa7.71□□□□□ -1.18
SCARB1-207ENST00000541661 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
SCARB1-207ENST00000541661 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SCARB1-207ENST00000541661 S100A8P05109 93 aa7.7□□□□□ -1.18
SCARB1-207ENST00000541661 LBHQ53QV2 105 aaPredicted RBP7.7□□□□□ -1.18
SCARB1-207ENST00000541661 A0A087X002 238 aa7.69□□□□□ -1.18
SCARB1-207ENST00000541661 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
SCARB1-207ENST00000541661 PRSS47A8MTI9 375 aa7.68□□□□□ -1.18
SCARB1-207ENST00000541661 CRYGAP11844 174 aa7.68□□□□□ -1.18
SCARB1-207ENST00000541661 MRPL54Q6P161 138 aaKnown RBP7.68□□□□□ -1.18
SCARB1-207ENST00000541661 Q6ZN92 141 aa7.68□□□□□ -1.18
SCARB1-207ENST00000541661 TEX43Q6ZNM6 134 aa7.68□□□□□ -1.18
SCARB1-207ENST00000541661 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
SCARB1-207ENST00000541661 C5orf52A6NGY3 159 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
SCARB1-207ENST00000541661 CKS1BP61024 79 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 TMEM136Q6ZRR5 245 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 FAM19A3Q7Z5A8 133 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 Q8IZM0 81 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 ORMDL3Q8N138 153 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 LINC00469Q8N7U9 141 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 TYMSOSQ8TAI1 123 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 AMELXQ99217 191 aa7.67□□□□□ -1.18
SCARB1-207ENST00000541661 BCE1O60756 84 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 PRSS2P07478 247 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 COX19Q49B96 90 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 C2orf88Q9BSF0 95 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
SCARB1-207ENST00000541661 KRTAP9-6A0A140TA67 174 aa7.65□□□□□ -1.18
SCARB1-207ENST00000541661 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
SCARB1-207ENST00000541661 TOMM7Q9P0U1 55 aa7.65□□□□□ -1.18
SCARB1-207ENST00000541661 TRGC2P03986 189 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 NPSP0C0P6 89 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 ZC2HC1BQ5TFG8 222 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 C2orf66Q6UXQ4 117 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 ATP5L2Q7Z4Y8 100 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 ALKBH7Q9BT30 221 aaPredicted RBP7.64□□□□□ -1.19
SCARB1-207ENST00000541661 VCX2Q9H322 139 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 LAMTOR2Q9Y2Q5 125 aa7.64□□□□□ -1.19
SCARB1-207ENST00000541661 F8VRH5 84 aa7.63□□□□□ -1.19
SCARB1-207ENST00000541661 S100A6P06703 90 aa7.63□□□□□ -1.19
SCARB1-207ENST00000541661 KRTAP13-2Q52LG2 175 aa7.63□□□□□ -1.19
SCARB1-207ENST00000541661 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BKO60814 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BJP06899 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BOP23527 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BBP33778 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BDP58876 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BCP62807 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST2H2BEQ16778 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 COA6Q5JTJ3 125 aaKnown RBP7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.62□□□□□ -1.19
SCARB1-207ENST00000541661 Q8N8P6 123 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BHQ93079 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 LINC00167Q96N53 147 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BNQ99877 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 HIST1H2BMQ99879 126 aa7.62□□□□□ -1.19
SCARB1-207ENST00000541661 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 IGIPA6NJ69 53 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 SNRPEP62304 92 aaKnown RBP7.61□□□□□ -1.19
SCARB1-207ENST00000541661 HERVK_113P63121 156 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 TPRXLQ17RH7 258 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 KRTAP13-1Q8IUC0 172 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 GNB1LQ9BYB4 327 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 MAP1LC3AQ9H492 121 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
SCARB1-207ENST00000541661 CXCL5P42830 114 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 SEC11AP67812 179 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 CTAG1AP78358 180 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 FAM229BQ4G0N7 80 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 ORMDL2Q53FV1 153 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 CDKN2A-AS1Q9UH64 79 aa7.6□□□□□ -1.19
SCARB1-207ENST00000541661 RPL37AP8A6NKH3 93 aa7.59□□□□□ -1.19
SCARB1-207ENST00000541661 K7EMI3 77 aa7.59□□□□□ -1.19
SCARB1-207ENST00000541661 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
SCARB1-207ENST00000541661 RETNLBQ9BQ08 111 aa7.59□□□□□ -1.19
SCARB1-207ENST00000541661 TRAPPC1Q9Y5R8 145 aa7.59□□□□□ -1.19
SCARB1-207ENST00000541661 IGLV5-37A0A075B6J1 123 aa7.58□□□□□ -1.2
SCARB1-207ENST00000541661 FABP9Q0Z7S8 132 aa7.58□□□□□ -1.2
SCARB1-207ENST00000541661 CDIP1Q9H305 208 aa7.58□□□□□ -1.2
SCARB1-207ENST00000541661 NDUFA6P56556 154 aa7.57□□□□□ -1.2
SCARB1-207ENST00000541661 PAPPA-AS1Q5QFB9 102 aa7.57□□□□□ -1.2
SCARB1-207ENST00000541661 IGLV7-46A0A075B6I9 117 aa7.56□□□□□ -1.2
SCARB1-207ENST00000541661 GEMIN7Q9H840 131 aaKnown RBP7.56□□□□□ -1.2
SCARB1-207ENST00000541661 GAGE10A6NGK3 116 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 SMIM1B2RUZ4 78 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 UBE2AP49459 152 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 HIST3H2BBQ8N257 126 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 TIMM17AQ99595 171 aa7.55□□□□□ -1.2
SCARB1-207ENST00000541661 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
SCARB1-207ENST00000541661 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
SCARB1-207ENST00000541661 G0S2P27469 103 aa7.54□□□□□ -1.2
SCARB1-207ENST00000541661 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
SCARB1-207ENST00000541661 COX7B2Q8TF08 81 aa7.54□□□□□ -1.2
SCARB1-207ENST00000541661 NXT2Q9NPJ8 142 aaKnown RBP7.54□□□□□ -1.2
SCARB1-207ENST00000541661 TOMM6Q96B49 74 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms