RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 Q8N814 137 aa6.87□□□□□ -1.31
VPS33A-204ENST00000540669 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
VPS33A-204ENST00000540669 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
VPS33A-204ENST00000540669 APOMO95445 188 aa6.86□□□□□ -1.31
VPS33A-204ENST00000540669 SPAG11BQ08648 103 aa6.86□□□□□ -1.31
VPS33A-204ENST00000540669 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
VPS33A-204ENST00000540669 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
VPS33A-204ENST00000540669 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
VPS33A-204ENST00000540669 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
VPS33A-204ENST00000540669 LECT2O14960 151 aa6.85□□□□□ -1.31
VPS33A-204ENST00000540669 CFAP161Q6P656 301 aa6.85□□□□□ -1.31
VPS33A-204ENST00000540669 ATOH7Q8N100 152 aa6.85□□□□□ -1.31
VPS33A-204ENST00000540669 hDV102S1A0JD36 115 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 LEPROTO15243 131 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 MALP21145 153 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 CXCL5P42830 114 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 MAJINQ3KP22 176 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 HIGD2BQ4VC39 106 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 STPG4Q8N801 248 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 COX7B2Q8TF08 81 aa6.84□□□□□ -1.31
VPS33A-204ENST00000540669 HERVK_113P61574 105 aa6.83□□□□□ -1.32
VPS33A-204ENST00000540669 C10orf25Q5T742 122 aa6.83□□□□□ -1.32
VPS33A-204ENST00000540669 J3QQQ9 107 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 NDUFA1O15239 70 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 SCGB1D1O95968 90 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 KRTAP10-2P60368 255 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 RNF151Q2KHN1 245 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 SFTA2Q6UW10 78 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 Q6ZRU5 148 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 LINC00526Q96FQ7 95 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 C6orf48Q9UBA6 75 aa6.82□□□□□ -1.32
VPS33A-204ENST00000540669 TRBV30A0A0K0K1B3 111 aa6.81□□□□□ -1.32
VPS33A-204ENST00000540669 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
VPS33A-204ENST00000540669 NMUP48645 174 aa6.81□□□□□ -1.32
VPS33A-204ENST00000540669 C2orf82Q6UX34 121 aa6.81□□□□□ -1.32
VPS33A-204ENST00000540669 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
VPS33A-204ENST00000540669 ZNF561-AS1K7EIQ3 104 aa6.8□□□□□ -1.32
VPS33A-204ENST00000540669 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
VPS33A-204ENST00000540669 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
VPS33A-204ENST00000540669 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
VPS33A-204ENST00000540669 LITAFQ99732 161 aa6.79□□□□□ -1.32
VPS33A-204ENST00000540669 NDUFA12Q9UI09 145 aa6.79□□□□□ -1.32
VPS33A-204ENST00000540669 RYR1P21817 5038 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 IGLV5-52A0A0A0MRZ9 124 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 DLEU1O43261 78 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 CIRBPQ14011 172 aaKnown RBP6.78□□□□□ -1.32
VPS33A-204ENST00000540669 Q6ZSA8 131 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 PCP2Q8IVA1 136 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 CAMK2N2Q96S95 79 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 VAMP8Q9BV40 100 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 TOMM7Q9P0U1 55 aa6.78□□□□□ -1.32
VPS33A-204ENST00000540669 BIRC6Q9NR09 4857 aa6.77□□□□□ -1.33
VPS33A-204ENST00000540669 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
VPS33A-204ENST00000540669 PRSS2P07478 247 aa6.77□□□□□ -1.33
VPS33A-204ENST00000540669 HERV-K104P63124 156 aa6.77□□□□□ -1.33
VPS33A-204ENST00000540669 C6orf226Q5I0X4 101 aa6.77□□□□□ -1.33
VPS33A-204ENST00000540669 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
VPS33A-204ENST00000540669 A0A0J9YXY3 114 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 COX8AP10176 69 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 LGALS3P17931 250 aaKnown RBP6.76□□□□□ -1.33
VPS33A-204ENST00000540669 CKS1BP61024 79 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 SPATA45Q537H7 98 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 SDIM1Q6ZPB5 146 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 TP73-AS1Q9UF72 201 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 PAM16Q9Y3D7 125 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 HSPG2P98160 4391 aa6.76□□□□□ -1.33
VPS33A-204ENST00000540669 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.75□□□□□ -1.33
VPS33A-204ENST00000540669 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 HSBP1L1C9JCN9 74 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 NDUFC2-KCTD14E9PQ53 114 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 TIMM17BO60830 172 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 COX17Q14061 63 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
VPS33A-204ENST00000540669 ERG28Q9UKR5 140 aa6.75□□□□□ -1.33
VPS33A-204ENST00000540669 LOC107984156A0A0G2JMH3 177 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 ZNF815PA8K554 130 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 GCSHP23434 173 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS33A-204ENST00000540669 XP32Q5T750 250 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 Q6ZRP5 223 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 PPDPFQ9H3Y8 114 aa6.74□□□□□ -1.33
VPS33A-204ENST00000540669 A0A096LNI7 61 aa6.73□□□□□ -1.33
VPS33A-204ENST00000540669 LINC00518Q8N0U6 118 aa6.73□□□□□ -1.33
VPS33A-204ENST00000540669 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
VPS33A-204ENST00000540669 LOC107984640A0A0U1RRK4 108 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 PANO1I0J062 215 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
VPS33A-204ENST00000540669 FAT1Q14517 4588 aa6.71□□□□□ -1.34
VPS33A-204ENST00000540669 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms