RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 FAT1Q14517 4588 aa8.44□□□□□ -1.06
CCDC130-202ENST00000540216 CKS1BP61024 79 aa8.43□□□□□ -1.06
CCDC130-202ENST00000540216 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
CCDC130-202ENST00000540216 VPS13BQ7Z7G8 4022 aa8.43□□□□□ -1.06
CCDC130-202ENST00000540216 CXCL5P42830 114 aa8.42□□□□□ -1.06
CCDC130-202ENST00000540216 PMCHL1Q16048 86 aa8.42□□□□□ -1.06
CCDC130-202ENST00000540216 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
CCDC130-202ENST00000540216 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
CCDC130-202ENST00000540216 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
CCDC130-202ENST00000540216 H3BRM9 83 aa8.41□□□□□ -1.06
CCDC130-202ENST00000540216 IGLC3P0DOY3 106 aa8.41□□□□□ -1.06
CCDC130-202ENST00000540216 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
CCDC130-202ENST00000540216 DMBT1Q9UGM3 2413 aaPredicted RBP8.41□□□□□ -1.06
CCDC130-202ENST00000540216 HERC1Q15751 4861 aa8.4□□□□□ -1.06
CCDC130-202ENST00000540216 TRGC2P03986 189 aa8.4□□□□□ -1.06
CCDC130-202ENST00000540216 NDUFA6P56556 154 aa8.4□□□□□ -1.06
CCDC130-202ENST00000540216 NDUFC2-KCTD14E9PQ53 114 aa8.39□□□□□ -1.07
CCDC130-202ENST00000540216 F8VRH5 84 aa8.39□□□□□ -1.07
CCDC130-202ENST00000540216 Q6ZRP5 223 aa8.39□□□□□ -1.07
CCDC130-202ENST00000540216 BAGE3Q86Y29 109 aa8.39□□□□□ -1.07
CCDC130-202ENST00000540216 COLCA2A8K830 154 aa8.38□□□□□ -1.07
CCDC130-202ENST00000540216 HSBP1O75506 76 aa8.38□□□□□ -1.07
CCDC130-202ENST00000540216 C9orf116Q5BN46 136 aaPredicted RBP8.38□□□□□ -1.07
CCDC130-202ENST00000540216 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
CCDC130-202ENST00000540216 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
CCDC130-202ENST00000540216 PRR3P79522 188 aaKnown RBP8.37□□□□□ -1.07
CCDC130-202ENST00000540216 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
CCDC130-202ENST00000540216 SPINK8P0C7L1 97 aa8.36□□□□□ -1.07
CCDC130-202ENST00000540216 CTAG1AP78358 180 aa8.36□□□□□ -1.07
CCDC130-202ENST00000540216 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
CCDC130-202ENST00000540216 IFI27L1Q96BM0 104 aa8.36□□□□□ -1.07
CCDC130-202ENST00000540216 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
CCDC130-202ENST00000540216 TRAV12-1A0A0B4J245 112 aa8.35□□□□□ -1.07
CCDC130-202ENST00000540216 OXTP01178 125 aa8.35□□□□□ -1.07
CCDC130-202ENST00000540216 ZNF22P17026 224 aaPredicted RBP8.35□□□□□ -1.07
CCDC130-202ENST00000540216 HNRNPA3P51991 378 aaKnown RBP8.35□□□□□ -1.07
CCDC130-202ENST00000540216 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
CCDC130-202ENST00000540216 C11orf86A6NJI1 115 aa8.34□□□□□ -1.07
CCDC130-202ENST00000540216 LINC00518Q8N0U6 118 aa8.34□□□□□ -1.07
CCDC130-202ENST00000540216 CHTOPQ9Y3Y2 248 aaKnown RBP8.34□□□□□ -1.07
CCDC130-202ENST00000540216 J3QL48 77 aa8.33□□□□□ -1.08
CCDC130-202ENST00000540216 SERF1AO75920 110 aa8.33□□□□□ -1.08
CCDC130-202ENST00000540216 SCO1O75880 301 aa8.32□□□□□ -1.08
CCDC130-202ENST00000540216 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
CCDC130-202ENST00000540216 TMEM170BQ5T4T1 132 aa8.32□□□□□ -1.08
CCDC130-202ENST00000540216 FAM19A5Q7Z5A7 132 aaPredicted RBP8.32□□□□□ -1.08
CCDC130-202ENST00000540216 FAM19A2Q8N3H0 131 aa8.32□□□□□ -1.08
CCDC130-202ENST00000540216 FAM168BA1KXE4 195 aa8.31□□□□□ -1.08
CCDC130-202ENST00000540216 LINC00310P59036 64 aa8.31□□□□□ -1.08
CCDC130-202ENST00000540216 ODF1Q14990 250 aa8.31□□□□□ -1.08
CCDC130-202ENST00000540216 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
CCDC130-202ENST00000540216 PHF5AQ7RTV0 110 aaKnown RBP8.31□□□□□ -1.08
CCDC130-202ENST00000540216 MYCBP2O75592 4640 aa8.3□□□□□ -1.08
CCDC130-202ENST00000540216 M0QXV9 152 aa8.3□□□□□ -1.08
CCDC130-202ENST00000540216 LEPROTL1O95214 131 aa8.3□□□□□ -1.08
CCDC130-202ENST00000540216 PSORS1C2Q9UIG4 136 aa8.29□□□□□ -1.08
CCDC130-202ENST00000540216 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
CCDC130-202ENST00000540216 SPINK6Q6UWN8 80 aa8.28□□□□□ -1.08
CCDC130-202ENST00000540216 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
CCDC130-202ENST00000540216 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
CCDC130-202ENST00000540216 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
CCDC130-202ENST00000540216 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
CCDC130-202ENST00000540216 COX17Q14061 63 aa8.26□□□□□ -1.09
CCDC130-202ENST00000540216 TP73-AS1Q9UF72 201 aa8.26□□□□□ -1.09
CCDC130-202ENST00000540216 H0Y8G0 127 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 NUPR1O60356 82 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BKO60814 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BJP06899 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BOP23527 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 PLNP26678 52 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BBP33778 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BDP58876 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BCP62807 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 UBE2BP63146 152 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 SRSF9Q13242 221 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST2H2BEQ16778 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
CCDC130-202ENST00000540216 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.25□□□□□ -1.09
CCDC130-202ENST00000540216 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BHQ93079 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 ZNF625Q96I27 306 aaPredicted RBP8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BNQ99877 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 HIST1H2BMQ99879 126 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 PLA2G2DQ9UNK4 145 aa8.25□□□□□ -1.09
CCDC130-202ENST00000540216 FABP4P15090 132 aa8.24□□□□□ -1.09
CCDC130-202ENST00000540216 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
CCDC130-202ENST00000540216 ERG28Q9UKR5 140 aa8.24□□□□□ -1.09
CCDC130-202ENST00000540216 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
CCDC130-202ENST00000540216 PFN2P35080 140 aa8.23□□□□□ -1.09
CCDC130-202ENST00000540216 IGLV5-37A0A075B6J1 123 aa8.22□□□□□ -1.09
CCDC130-202ENST00000540216 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
CCDC130-202ENST00000540216 MRPL55Q7Z7F7 128 aaKnown RBP8.22□□□□□ -1.09
CCDC130-202ENST00000540216 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
CCDC130-202ENST00000540216 MAP1LC3CQ9BXW4 147 aa8.22□□□□□ -1.09
CCDC130-202ENST00000540216 DPM2O94777 84 aa8.21□□□□□ -1.1
CCDC130-202ENST00000540216 C12orf57Q99622 126 aa8.21□□□□□ -1.1
CCDC130-202ENST00000540216 HERV-K104P63124 156 aa8.2□□□□□ -1.1
CCDC130-202ENST00000540216 NKAPP1Q8N9T2 125 aa8.2□□□□□ -1.1
CCDC130-202ENST00000540216 LINC01600Q96MT4 127 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms