RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 C9orf153Q5TBE3 101 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 TMEM219Q86XT9 240 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 OBSCN-AS1Q96MR7 158 aa5.46□□□□□ -1.54
CCDC60-204ENST00000539847 TRBV10-1A0A0K0K1A3 114 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 J3KT08 172 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 IGHV3-11P01762 117 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 BLCAPP62952 87 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 DAZ2Q13117 558 aaKnown RBP5.45□□□□□ -1.54
CCDC60-204ENST00000539847 DAZ4Q86SG3 579 aaKnown RBP5.45□□□□□ -1.54
CCDC60-204ENST00000539847 ZNF625Q96I27 306 aaPredicted RBP5.45□□□□□ -1.54
CCDC60-204ENST00000539847 DAZ3Q9NR90 486 aaKnown RBP5.45□□□□□ -1.54
CCDC60-204ENST00000539847 CDKN2A-AS1Q9UH64 79 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 LINC00527Q9UJ94 153 aa5.45□□□□□ -1.54
CCDC60-204ENST00000539847 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
CCDC60-204ENST00000539847 Q6JHZ5 121 aa5.44□□□□□ -1.54
CCDC60-204ENST00000539847 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
CCDC60-204ENST00000539847 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
CCDC60-204ENST00000539847 TRAV12-2A0A075B6T6 113 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 BCE1O60756 84 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 SPINK13Q1W4C9 94 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 LINC00242Q5T6M2 205 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 GAGE2AQ6NT46 116 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 SMCR5Q8TEV8 140 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 Q9H8V8 135 aa5.43□□□□□ -1.54
CCDC60-204ENST00000539847 TENM2Q9NT68 2774 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 IGKV3-7A0A075B6H7 116 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 IGHV3OR16-12A0A075B7B8 117 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 SMIM1B2RUZ4 78 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 HOXD3P31249 432 aaPredicted RBP5.42□□□□□ -1.54
CCDC60-204ENST00000539847 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
CCDC60-204ENST00000539847 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
CCDC60-204ENST00000539847 DYNC2H1Q8NCM8 4307 aaKnown RBP5.42□□□□□ -1.54
CCDC60-204ENST00000539847 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 F5H768 121 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 LINC00694P0DN24 101 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 TMEM258P61165 79 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 CASC10Q5T4H9 136 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 CEMP1Q6PRD7 247 aaPredicted RBP5.41□□□□□ -1.54
CCDC60-204ENST00000539847 SERP2Q8N6R1 65 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 OR13C6PQ8NH95 151 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 MUC7Q8TAX7 377 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 DEFB104AQ8WTQ1 72 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 UBE2E2Q96LR5 201 aa5.41□□□□□ -1.54
CCDC60-204ENST00000539847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.4□□□□□ -1.54
CCDC60-204ENST00000539847 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 IGKV2-29A2NJV5 120 aaPredicted RBP5.4□□□□□ -1.54
CCDC60-204ENST00000539847 COX6A2Q02221 97 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 SOSTDC1Q6X4U4 206 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 C11orf72Q8NBR9 251 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 CDC42SE2Q9NRR3 84 aa5.4□□□□□ -1.54
CCDC60-204ENST00000539847 KLK5Q9Y337 293 aaPredicted RBP5.4□□□□□ -1.54
CCDC60-204ENST00000539847 SORL1Q92673 2214 aa5.4□□□□□ -1.55
CCDC60-204ENST00000539847 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1A1P0DJD3 496 aaKnown RBP5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1CP0DJD4 496 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RPL36AP83881 106 aaKnown RBP5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1FQ15415 496 aaKnown RBP5.39□□□□□ -1.55
CCDC60-204ENST00000539847 C9orf66Q5T8R8 295 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RPL36ALQ969Q0 106 aaKnown RBP5.39□□□□□ -1.55
CCDC60-204ENST00000539847 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 SACSQ9NZJ4 4579 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 RYR2Q92736 4967 aa5.39□□□□□ -1.55
CCDC60-204ENST00000539847 TRAV25A0A0B4J276 109 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 LCE6AA0A183 80 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 SMIM9A6NGZ8 99 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 IBA57-AS1B1ANH7 110 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 CCL24O00175 119 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 DNAL4O96015 105 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 IGKV3-20P01619 116 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 CRPP02741 224 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 NPC2P61916 151 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 LYPD5Q6UWN5 251 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 LINC01561Q8N1V8 128 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 LINC00167Q96N53 147 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
CCDC60-204ENST00000539847 DNAH1Q9P2D7 4330 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 JMJD7-PLA2G4BH0Y9G9 81 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 INSP01308 110 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 CMC4P56277 68 aaPredicted RBP5.37□□□□□ -1.55
CCDC60-204ENST00000539847 C10orf99Q6UWK7 81 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 FAM218AQ96MZ4 157 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
CCDC60-204ENST00000539847 IGHV3-73A0A0B4J1V6 119 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1BA6NDE4 496 aaKnown RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1EA6NEQ0 496 aaKnown RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 H3BQ85 93 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 NDUFC2O95298 119 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 CCKP06307 115 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 RBMY1DP0C7P1 496 aaKnown RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 SYNJ2BPP57105 145 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 DEFB131AP59861 70 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 RNASE13Q5GAN3 156 aaKnown RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 FAM19A5Q7Z5A7 132 aaPredicted RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 C4orf3Q8WVX3 66 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 DPH3Q96FX2 82 aa5.36□□□□□ -1.55
CCDC60-204ENST00000539847 HUWE1Q7Z6Z7 4374 aaKnown RBP5.36□□□□□ -1.55
CCDC60-204ENST00000539847 EPPK1P58107 5090 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms