RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	PTPRS	Q13332	1948 aa		6.25	□□□□□ -1.41
ECHDC2-222	ENST00000539680	PSPHP1	O15172	72 aa		6.25	□□□□□ -1.41
ECHDC2-222	ENST00000539680	NCOA6	Q14686	2063 aa	Predicted RBP	6.24	□□□□□ -1.41
ECHDC2-222	ENST00000539680	DEFB116	Q30KQ4	102 aa		6.24	□□□□□ -1.41
ECHDC2-222	ENST00000539680	PCDH15	Q96QU1	1955 aa		6.24	□□□□□ -1.41
ECHDC2-222	ENST00000539680	LINC00167	Q96N53	147 aa		6.24	□□□□□ -1.41
ECHDC2-222	ENST00000539680	DOCK10	Q96BY6	2186 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	APC2	O95996	2303 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680		A0A1W2PPR1	153 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	RPS28	P62857	69 aa	Known RBP	6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	IGKV2D-30	A0A075B6S6	120 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	FAM229A	H3BQW9	127 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	IGKV2-30	P06310	120 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	C6orf48	Q9UBA6	75 aa		6.23	□□□□□ -1.41
ECHDC2-222	ENST00000539680	ZGRF1	Q86YA3	2104 aa		6.22	□□□□□ -1.41
ECHDC2-222	ENST00000539680	FAM186A	A6NE01	2351 aa		6.22	□□□□□ -1.41
ECHDC2-222	ENST00000539680	TECTA	O75443	2155 aa		6.22	□□□□□ -1.41
ECHDC2-222	ENST00000539680	MOBP	Q13875	183 aa		6.22	□□□□□ -1.41
ECHDC2-222	ENST00000539680		Q6ZRP5	223 aa		6.22	□□□□□ -1.41
ECHDC2-222	ENST00000539680	DSCAM	O60469	2012 aa		6.21	□□□□□ -1.41
ECHDC2-222	ENST00000539680	C16orf90	A8MZG2	172 aa		6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680	SPTA1	P02549	2419 aa		6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680	C8orf87	E5RJ46	101 aa		6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680		Q6ZRX8	168 aa		6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680	DIDO1	Q9BTC0	2240 aa	Known RBP	6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680	LINC00313	P59037	77 aa		6.21	□□□□□ -1.42
ECHDC2-222	ENST00000539680	CACNA1B	Q00975	2339 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680	MED12L	Q86YW9	2145 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680	RTL8C	O15255	209 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680	COL4A2	P08572	1712 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680	ZNF318	Q5VUA4	2279 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680		A8MTW9	85 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680		Q6ZQT0	140 aa		6.2	□□□□□ -1.42
ECHDC2-222	ENST00000539680	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	LINC00315	P59091	139 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	CEP290	O15078	2479 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	TRAV22	A0A0B4J277	110 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	SPACA4	Q8TDM5	124 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	CDIP1	Q9H305	208 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	CEP250	Q9BV73	2442 aa		6.19	□□□□□ -1.42
ECHDC2-222	ENST00000539680	MAP1B	P46821	2468 aa	Known RBP	6.18	□□□□□ -1.42
ECHDC2-222	ENST00000539680	SPAG11A	Q6PDA7	123 aa		6.18	□□□□□ -1.42
ECHDC2-222	ENST00000539680	NBDY	A0A0U1RRE5	68 aa		6.18	□□□□□ -1.42
ECHDC2-222	ENST00000539680	PLA2G1B	P04054	148 aa	Known RBP	6.18	□□□□□ -1.42
ECHDC2-222	ENST00000539680	COL6A6	A6NMZ7	2263 aa		6.18	□□□□□ -1.42
ECHDC2-222	ENST00000539680	LINC00476	Q8WZB0	136 aa		6.17	□□□□□ -1.42
ECHDC2-222	ENST00000539680	PKDREJ	Q9NTG1	2253 aa		6.17	□□□□□ -1.42
ECHDC2-222	ENST00000539680	TYMSOS	Q8TAI1	123 aa		6.17	□□□□□ -1.42
ECHDC2-222	ENST00000539680	LOC101927531	A0A1B0GV80	90 aa		6.17	□□□□□ -1.42
ECHDC2-222	ENST00000539680	EML5	Q05BV3	1969 aa		6.16	□□□□□ -1.42
ECHDC2-222	ENST00000539680	KLK9	Q2XQG4	91 aa		6.16	□□□□□ -1.42
ECHDC2-222	ENST00000539680	SHANK1	Q9Y566	2161 aa		6.16	□□□□□ -1.42
ECHDC2-222	ENST00000539680	EPM2A	B3EWF7	344 aa		6.16	□□□□□ -1.42
ECHDC2-222	ENST00000539680	TANC2	Q9HCD6	1990 aa		6.16	□□□□□ -1.42
ECHDC2-222	ENST00000539680	TRBV7-4	A0A0J9YYF1	115 aa		6.15	□□□□□ -1.42
ECHDC2-222	ENST00000539680	PHF5A	Q7RTV0	110 aa	Known RBP	6.15	□□□□□ -1.43
ECHDC2-222	ENST00000539680	ERC2-IT1	O76042	136 aa		6.14	□□□□□ -1.43
ECHDC2-222	ENST00000539680	HCFC1	P51610	2035 aa		6.14	□□□□□ -1.43
ECHDC2-222	ENST00000539680	PCNX2	A6NKB5	2137 aa		6.13	□□□□□ -1.43
ECHDC2-222	ENST00000539680	ATP11AUN	Q6ZP68	121 aa		6.13	□□□□□ -1.43
ECHDC2-222	ENST00000539680	ABCA4	P78363	2273 aa		6.13	□□□□□ -1.43
ECHDC2-222	ENST00000539680	ACACA	Q13085	2346 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680		A8MWP4	228 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680		Q8NAQ8	132 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680	FAM218A	Q96MZ4	157 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680	DNAH10OS	P0CZ25	163 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680	POLE	Q07864	2286 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680	LINC00588	Q9Y4M8	146 aa		6.12	□□□□□ -1.43
ECHDC2-222	ENST00000539680		Q9UF83	564 aa		6.11	□□□□□ -1.43
ECHDC2-222	ENST00000539680	EXPH5	Q8NEV8	1989 aa		6.11	□□□□□ -1.43
ECHDC2-222	ENST00000539680	WNK2	Q9Y3S1	2297 aa		6.11	□□□□□ -1.43
ECHDC2-222	ENST00000539680	RPL37A	P61513	92 aa	Known RBP	6.1	□□□□□ -1.43
ECHDC2-222	ENST00000539680	IGLV6-57	P01721	117 aa		6.1	□□□□□ -1.43
ECHDC2-222	ENST00000539680		Q96NJ1	140 aa		6.1	□□□□□ -1.43
ECHDC2-222	ENST00000539680	WWC2-AS2	Q96NR7	200 aa		6.1	□□□□□ -1.43
ECHDC2-222	ENST00000539680	PRO0461	Q9UI25	63 aa		6.1	□□□□□ -1.43
ECHDC2-222	ENST00000539680	SMCP	P49901	116 aa	Predicted RBP	6.09	□□□□□ -1.43
ECHDC2-222	ENST00000539680	ST20-AS1	Q8NBB2	130 aa		6.08	□□□□□ -1.44
ECHDC2-222	ENST00000539680	MRPL34	Q9BQ48	92 aa	Known RBP	6.08	□□□□□ -1.44
ECHDC2-222	ENST00000539680	SPTBN1	Q01082	2364 aa	Known RBP	6.08	□□□□□ -1.44
ECHDC2-222	ENST00000539680	KRTAP24-1	Q3LI83	254 aa		6.08	□□□□□ -1.44
ECHDC2-222	ENST00000539680	FREM1	Q5H8C1	2179 aa		6.08	□□□□□ -1.44
ECHDC2-222	ENST00000539680	AKAP6	Q13023	2319 aa		6.07	□□□□□ -1.44
ECHDC2-222	ENST00000539680	CYP4F30P	Q9H0H9	118 aa		6.07	□□□□□ -1.44
ECHDC2-222	ENST00000539680	IGLV1-50	A0A075B6I6	118 aa		6.07	□□□□□ -1.44
ECHDC2-222	ENST00000539680	CHTF8	P0CG12	524 aa		6.07	□□□□□ -1.44
ECHDC2-222	ENST00000539680	CAD	P27708	2225 aa		6.06	□□□□□ -1.44
ECHDC2-222	ENST00000539680	KRTAP21-3	Q3LHN1	58 aa		6.06	□□□□□ -1.44
ECHDC2-222	ENST00000539680	TET2	Q6N021	2002 aa	Predicted RBP	6.06	□□□□□ -1.44
ECHDC2-222	ENST00000539680	EP300	Q09472	2414 aa	Predicted RBP	6.06	□□□□□ -1.44
ECHDC2-222	ENST00000539680	CD164	Q04900	197 aa		6.05	□□□□□ -1.44
ECHDC2-222	ENST00000539680	KCNQ1DN	Q9H478	68 aa		6.05	□□□□□ -1.44
ECHDC2-222	ENST00000539680	SERTAD4-AS1	Q5TG53	156 aa		6.05	□□□□□ -1.44
ECHDC2-222	ENST00000539680	PLA2G2D	Q9UNK4	145 aa		6.05	□□□□□ -1.44
ECHDC2-222	ENST00000539680	COL27A1	Q8IZC6	1860 aa	Predicted RBP	6.04	□□□□□ -1.44
ECHDC2-222	ENST00000539680	LITAF	Q99732	161 aa		6.04	□□□□□ -1.44
ECHDC2-222	ENST00000539680	DSCAML1	Q8TD84	2053 aa		6.04	□□□□□ -1.44
ECHDC2-222	ENST00000539680		J3QL48	77 aa		6.03	□□□□□ -1.44
ECHDC2-222	ENST00000539680	HIVEP2	P31629	2446 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms