RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 TMEM218A2RU14 115 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 HMSDA8MTL9 139 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 KLF7O75840 302 aaPredicted RBP0.35□□□□□ -2.35
HIF1A-204ENST00000539097 UBL3O95164 117 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 SPINK8P0C7L1 97 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 GUCA1AP43080 201 aaPredicted RBP0.35□□□□□ -2.35
HIF1A-204ENST00000539097 EFNA4P52798 201 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 COPZ1P61923 177 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 BLCAPP62952 87 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 KLKP1Q107X0 134 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 TEX29Q8N6K0 151 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 BRK1Q8WUW1 75 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 SPRR4Q96PI1 79 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 AMELXQ99217 191 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 PBDC1Q9BVG4 233 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 SEC11CQ9BY50 192 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 LINC00846Q9NV44 126 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 NINQ8N4C6 2090 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 CREBBPQ92793 2442 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 MAP1AP78559 2803 aaPredicted RBP0.35□□□□□ -2.35
HIF1A-204ENST00000539097 ZGRF1Q86YA3 2104 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 K7EP34 96 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 GYPBP06028 91 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 IFITM1P13164 125 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 CBLN1P23435 193 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 SRP14P37108 136 aaKnown RBP0.35□□□□□ -2.35
HIF1A-204ENST00000539097 CSN1S1P47710 185 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 GDF5OSQ5U4N7 250 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 DPPA3Q6W0C5 159 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 C10orf105Q8TEF2 133 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 PATE1Q8WXA2 126 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 COL7A1Q02388 2944 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 CADP27708 2225 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 GCC2Q8IWJ2 1684 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 ADGRG4Q8IZF6 3080 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 GVINP1Q7Z2Y8 2422 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 FLNCQ14315 2725 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 NBDYA0A0U1RRE5 68 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 HCRTO43612 131 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 INSL4Q14641 139 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 MPV17LQ2QL34 196 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 Q56UQ5 140 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 KHDC3LQ587J8 217 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 VMO1Q7Z5L0 202 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 FAM216BQ8N7L0 139 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 OR4X2Q8NGF9 303 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 TSKUQ8WUA8 353 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 CCDC167Q9P0B6 97 aa0.35□□□□□ -2.35
HIF1A-204ENST00000539097 TRBV7-3A0A075B6L6 115 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 UQCRHLA0A096LP55 91 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 TRAV10A0A0B4J240 114 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 C3orf85A0A1B0GTC6 90 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 M0R129 80 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 CCL16O15467 120 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 ERC2-IT1O76042 136 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 UQCRHP07919 91 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 FABP4P15090 132 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 NEDD8Q15843 81 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 ZNF563Q8TA94 476 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 NAA60Q9H7X0 242 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 CDC42SE1Q9NRR8 79 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 FKBP11Q9NYL4 201 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 ANKARQ7Z5J8 1434 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 DOCK11Q5JSL3 2073 aa0.34□□□□□ -2.35
HIF1A-204ENST00000539097 IGKV3D-7A0A0C4DH55 119 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 IGKV3OR2-268A0A0C4DH90 116 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 hDV103S1A0JD37 113 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 C1orf196B1AJZ1 125 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 IGLV3-1P01715 115 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 EIF2B2P49770 351 aaKnown RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 UNQ5815/PRO19632Q6UWF5 114 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 Q86TA4 180 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 OR2T35Q8NGX2 323 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 VSTM2AQ8TAG5 236 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 PPDPFLQ8WWR9 84 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 MUCL1Q96DR8 90 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 FAM167A-AS1Q96KT0 104 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 AQP10Q96PS8 301 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 MED11Q9P086 117 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 GNG8Q9UK08 70 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 TIMM9Q9Y5J7 89 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 CNOT1A5YKK6 2376 aaKnown RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 LAMA1P25391 3075 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 ZNF736B4DX44 427 aaPredicted RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 M0R2Z0 102 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 SSSCA1O60232 199 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 EDF1O60869 148 aaKnown RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 ASAH2BP0C7U1 165 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 TRAPPC2P0DI81 140 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 TRAPPC2BP0DI82 140 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 FXYD6P3P58550 94 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 NPC2P61916 151 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 ERHP84090 104 aaKnown RBP0.34□□□□□ -2.36
HIF1A-204ENST00000539097 RHOHQ15669 191 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 CFAP126Q5VTH2 177 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 OR5D16Q8NGK9 328 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 PPP1R1CQ8WVI7 109 aa0.34□□□□□ -2.36
HIF1A-204ENST00000539097 NPCDR1Q9BY65 106 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms