RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TSPEAR-AS2P59090 65 aa7.17□□□□□ -1.26
COL4A6-208ENST00000538570 CCDC168Q8NDH2 2452 aa7.17□□□□□ -1.26
COL4A6-208ENST00000538570 KTN1-AS1Q86SY8 53 aa7.17□□□□□ -1.26
COL4A6-208ENST00000538570 ZNF843Q8N446 348 aa7.17□□□□□ -1.26
COL4A6-208ENST00000538570 CIRBP-AS1Q8TBR5 109 aa7.17□□□□□ -1.26
COL4A6-208ENST00000538570 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 COX6A2Q02221 97 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 C9orf116Q5BN46 136 aaPredicted RBP7.16□□□□□ -1.26
COL4A6-208ENST00000538570 IGF2RP11717 2491 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 H0Y9P7 68 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 LINC01547P58512 204 aaPredicted RBP7.16□□□□□ -1.26
COL4A6-208ENST00000538570 LINC00846Q9NV44 126 aa7.16□□□□□ -1.26
COL4A6-208ENST00000538570 C10orf142B7Z368 130 aa7.15□□□□□ -1.27
COL4A6-208ENST00000538570 C6orf223Q8N319 242 aa7.15□□□□□ -1.27
COL4A6-208ENST00000538570 hDV103S1A0JD37 113 aa7.15□□□□□ -1.27
COL4A6-208ENST00000538570 LCA10Q71F78 164 aa7.14□□□□□ -1.27
COL4A6-208ENST00000538570 PRR14LQ5THK1 2151 aa7.14□□□□□ -1.27
COL4A6-208ENST00000538570 PRR3P79522 188 aaKnown RBP7.14□□□□□ -1.27
COL4A6-208ENST00000538570 ADAMTSL4-AS1Q5T5F5 129 aa7.14□□□□□ -1.27
COL4A6-208ENST00000538570 DSCAMO60469 2012 aa7.14□□□□□ -1.27
COL4A6-208ENST00000538570 NAV3Q8IVL0 2385 aa7.13□□□□□ -1.27
COL4A6-208ENST00000538570 PLXNB1O43157 2135 aa7.13□□□□□ -1.27
COL4A6-208ENST00000538570 COL4A4P53420 1690 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-208ENST00000538570 LINC00575Q6W349 94 aa7.13□□□□□ -1.27
COL4A6-208ENST00000538570 WIPF1O43516 503 aa7.13□□□□□ -1.27
COL4A6-208ENST00000538570 C7orf65Q6ZTY9 151 aa7.13□□□□□ -1.27
COL4A6-208ENST00000538570 IGLV4-60A0A075B6I1 120 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 Q9BRP9 147 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 X6R8D5 127 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 A0A1B0GU69 56 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 SBSPONQ8IVN8 264 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 ODF3L2Q3SX64 289 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 NUPR2A6NF83 97 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 HCFC1P51610 2035 aa7.12□□□□□ -1.27
COL4A6-208ENST00000538570 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
COL4A6-208ENST00000538570 PIEZO2Q9H5I5 2752 aa7.11□□□□□ -1.27
COL4A6-208ENST00000538570 A0A096LNJ9 63 aa7.11□□□□□ -1.27
COL4A6-208ENST00000538570 AMELXQ99217 191 aa7.11□□□□□ -1.27
COL4A6-208ENST00000538570 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
COL4A6-208ENST00000538570 FHL2Q14192 279 aa7.1□□□□□ -1.27
COL4A6-208ENST00000538570 IGLV5-52A0A0A0MRZ9 124 aa7.1□□□□□ -1.27
COL4A6-208ENST00000538570 TLN1Q9Y490 2541 aaKnown RBP7.1□□□□□ -1.27
COL4A6-208ENST00000538570 SMCPP49901 116 aaPredicted RBP7.09□□□□□ -1.27
COL4A6-208ENST00000538570 A0A087WSZ3 146 aa7.09□□□□□ -1.27
COL4A6-208ENST00000538570 SPINK1P00995 79 aa7.09□□□□□ -1.27
COL4A6-208ENST00000538570 ZNF580Q9UK33 172 aa7.09□□□□□ -1.27
COL4A6-208ENST00000538570 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
COL4A6-208ENST00000538570 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
COL4A6-208ENST00000538570 PCNX3Q9H6A9 2034 aa7.08□□□□□ -1.28
COL4A6-208ENST00000538570 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
COL4A6-208ENST00000538570 IGLV1-51P01701 117 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 ARHGAP32A7KAX9 2087 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 ATG2AQ2TAZ0 1938 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 MUC22E2RYF6 1773 aaPredicted RBP7.07□□□□□ -1.28
COL4A6-208ENST00000538570 SORL1Q92673 2214 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 MYO9AB2RTY4 2548 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 A8MUN3 132 aa7.07□□□□□ -1.28
COL4A6-208ENST00000538570 BCE1O60756 84 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 AVPP01185 164 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 DEFB116Q30KQ4 102 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 PRO0461Q9UI25 63 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 EML5Q05BV3 1969 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 EP400Q96L91 3159 aa7.06□□□□□ -1.28
COL4A6-208ENST00000538570 Q6ZTC4 211 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 SMIM29Q86T20 159 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 A0A1B0GUV1 79 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
COL4A6-208ENST00000538570 BRI3O95415 125 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 SSBP3-AS1Q7Z2R9 100 aa7.05□□□□□ -1.28
COL4A6-208ENST00000538570 Q6ZSN1 163 aa7.04□□□□□ -1.28
COL4A6-208ENST00000538570 CYP4F30PQ9H0H9 118 aa7.02□□□□□ -1.28
COL4A6-208ENST00000538570 C2CD3Q4AC94 2353 aa7.02□□□□□ -1.29
COL4A6-208ENST00000538570 LYPD5Q6UWN5 251 aa7.02□□□□□ -1.29
COL4A6-208ENST00000538570 A8MTW9 85 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 CDSNQ15517 529 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 PRR15Q8IV56 129 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 FSHBP01225 129 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 C16orf95Q9H693 158 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 Q6ZRU5 148 aa7.01□□□□□ -1.29
COL4A6-208ENST00000538570 SMR3AQ99954 134 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 CEP192Q8TEP8 1941 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 PRLHP81277 87 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 Q8N2B8 174 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
COL4A6-208ENST00000538570 C1orf134Q5TEV5 83 aa6.99□□□□□ -1.29
COL4A6-208ENST00000538570 SMCR5Q8TEV8 140 aa6.99□□□□□ -1.29
COL4A6-208ENST00000538570 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
COL4A6-208ENST00000538570 NHLRC4P0CG21 123 aaPredicted RBP6.98□□□□□ -1.29
COL4A6-208ENST00000538570 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
COL4A6-208ENST00000538570 CEP295Q9C0D2 2601 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 TM2D3Q9BRN9 247 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 SRCAPQ6ZRS2 3230 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 KIAA0087Q14695 138 aa6.97□□□□□ -1.29
COL4A6-208ENST00000538570 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms