RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 Q8N2B8 174 aa4.9□□□□□ -1.62
SORT1-209ENST00000538502 WISP2O76076 250 aa4.9□□□□□ -1.62
SORT1-209ENST00000538502 Q6ZQT0 140 aa4.9□□□□□ -1.62
SORT1-209ENST00000538502 C9orf116Q5BN46 136 aaPredicted RBP4.9□□□□□ -1.63
SORT1-209ENST00000538502 C6orf223Q8N319 242 aa4.9□□□□□ -1.63
SORT1-209ENST00000538502 A0A087WSZ3 146 aa4.9□□□□□ -1.63
SORT1-209ENST00000538502 PRR3P79522 188 aaKnown RBP4.9□□□□□ -1.63
SORT1-209ENST00000538502 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
SORT1-209ENST00000538502 FAM19A4Q96LR4 140 aa4.9□□□□□ -1.63
SORT1-209ENST00000538502 FREM1Q5H8C1 2179 aa4.89□□□□□ -1.63
SORT1-209ENST00000538502 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
SORT1-209ENST00000538502 C10orf142B7Z368 130 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 LINC01006Q8NI28 216 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 C19orf84I3L1E1 186 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 IGLV1-51P01701 117 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 PLXNB1O43157 2135 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 CEP192Q8TEP8 1941 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 NHLRC4P0CG21 123 aaPredicted RBP4.88□□□□□ -1.63
SORT1-209ENST00000538502 C16orf95Q9H693 158 aa4.88□□□□□ -1.63
SORT1-209ENST00000538502 MED13LQ71F56 2210 aa4.87□□□□□ -1.63
SORT1-209ENST00000538502 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
SORT1-209ENST00000538502 Q6ZSN1 163 aa4.87□□□□□ -1.63
SORT1-209ENST00000538502 RETNLBQ9BQ08 111 aa4.87□□□□□ -1.63
SORT1-209ENST00000538502 CD164Q04900 197 aa4.86□□□□□ -1.63
SORT1-209ENST00000538502 C18orf65Q6ZTR6 163 aa4.86□□□□□ -1.63
SORT1-209ENST00000538502 RIF1Q5UIP0 2472 aaKnown RBP4.86□□□□□ -1.63
SORT1-209ENST00000538502 ADAMTS20P59510 1910 aa4.86□□□□□ -1.63
SORT1-209ENST00000538502 CREBBPQ92793 2442 aa4.86□□□□□ -1.63
SORT1-209ENST00000538502 KIAA0087Q14695 138 aa4.86□□□□□ -1.63
SORT1-209ENST00000538502 PRM2P04554 102 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 DSCAMO60469 2012 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 NBASA2RRP1 2371 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 NUPR2A6NF83 97 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 LINC00315P59091 139 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 CIRBP-AS1Q8TBR5 109 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
SORT1-209ENST00000538502 PTPRSQ13332 1948 aa4.84□□□□□ -1.63
SORT1-209ENST00000538502 FAM218AQ96MZ4 157 aa4.84□□□□□ -1.63
SORT1-209ENST00000538502 LYPD5Q6UWN5 251 aa4.84□□□□□ -1.63
SORT1-209ENST00000538502 C7orf65Q6ZTY9 151 aa4.84□□□□□ -1.63
SORT1-209ENST00000538502 RAI1Q7Z5J4 1906 aaPredicted RBP4.84□□□□□ -1.64
SORT1-209ENST00000538502 Q8NBF4 154 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 SMCR5Q8TEV8 140 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 TRAV22A0A0B4J277 110 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 Q6ZRU5 148 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 KLKP1Q107X0 134 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 ARHGAP32A7KAX9 2087 aa4.83□□□□□ -1.64
SORT1-209ENST00000538502 C22orf24Q9Y442 160 aa4.82□□□□□ -1.64
SORT1-209ENST00000538502 PRR14LQ5THK1 2151 aa4.82□□□□□ -1.64
SORT1-209ENST00000538502 EDN2P20800 178 aa4.82□□□□□ -1.64
SORT1-209ENST00000538502 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
SORT1-209ENST00000538502 MOBPQ13875 183 aa4.82□□□□□ -1.64
SORT1-209ENST00000538502 TRBV7-4A0A0J9YYF1 115 aa4.81□□□□□ -1.64
SORT1-209ENST00000538502 TM2D3Q9BRN9 247 aa4.81□□□□□ -1.64
SORT1-209ENST00000538502 EXPH5Q8NEV8 1989 aa4.81□□□□□ -1.64
SORT1-209ENST00000538502 H3BNG1 76 aa4.81□□□□□ -1.64
SORT1-209ENST00000538502 WIPF1O43516 503 aa4.81□□□□□ -1.64
SORT1-209ENST00000538502 GVQW2A0A096LPI5 108 aaPredicted RBP4.81□□□□□ -1.64
SORT1-209ENST00000538502 LY6G6DO95868 133 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 LITAFQ99732 161 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 LINC01556Q5JQF7 62 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 A8MTW9 85 aa4.8□□□□□ -1.64
SORT1-209ENST00000538502 IGLV5-52A0A0A0MRZ9 124 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 INAFM1C9JVW0 142 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 Q6ZRX8 168 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 SPINK1P00995 79 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 KTN1-AS1Q86SY8 53 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 Q9UF83 564 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 KLK9Q2XQG4 91 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 GPR179Q6PRD1 2367 aa4.79□□□□□ -1.64
SORT1-209ENST00000538502 X6R8D5 127 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 LINC00476Q8WZB0 136 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 LCA10Q71F78 164 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 COA5Q86WW8 74 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 A8MWP4 228 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 IGLV6-57P01721 117 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 LINC00167Q96N53 147 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 SORL1Q92673 2214 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 PTPRQQ9UMZ3 2332 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 PRR15Q8IV56 129 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 WNK1Q9H4A3 2382 aa4.77□□□□□ -1.65
SORT1-209ENST00000538502 PRRC2AP48634 2157 aaKnown RBP4.77□□□□□ -1.65
SORT1-209ENST00000538502 PRLHP81277 87 aa4.76□□□□□ -1.65
SORT1-209ENST00000538502 UQCR11O14957 56 aa4.76□□□□□ -1.65
SORT1-209ENST00000538502 AVPP01185 164 aa4.76□□□□□ -1.65
SORT1-209ENST00000538502 M0R2N4 97 aa4.76□□□□□ -1.65
SORT1-209ENST00000538502 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
SORT1-209ENST00000538502 IGKV2D-30A0A075B6S6 120 aa4.75□□□□□ -1.65
SORT1-209ENST00000538502 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
SORT1-209ENST00000538502 OXLD1Q5BKU9 147 aa4.75□□□□□ -1.65
SORT1-209ENST00000538502 SRCAPQ6ZRS2 3230 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 A8MUN3 132 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 LINC00313P59037 77 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 FSHBP01225 129 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 FHL3Q13643 280 aa4.74□□□□□ -1.65
SORT1-209ENST00000538502 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms