RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 Q8IZM0 81 aa7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 UQCR10Q9UDW1 63 aa7.1□□□□□ -1.27
TNFRSF1A-211ENST00000538363 IGKV2D-26A0A0A0MRZ7 120 aa7.09□□□□□ -1.27
TNFRSF1A-211ENST00000538363 LCE6AA0A183 80 aa7.09□□□□□ -1.27
TNFRSF1A-211ENST00000538363 NDUFA1O15239 70 aa7.09□□□□□ -1.27
TNFRSF1A-211ENST00000538363 COX8AP10176 69 aa7.09□□□□□ -1.27
TNFRSF1A-211ENST00000538363 ZNF625Q96I27 306 aaPredicted RBP7.09□□□□□ -1.27
TNFRSF1A-211ENST00000538363 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
TNFRSF1A-211ENST00000538363 LINC00587B1AMM8 73 aa7.08□□□□□ -1.28
TNFRSF1A-211ENST00000538363 HERV-K104P63124 156 aa7.08□□□□□ -1.28
TNFRSF1A-211ENST00000538363 PCP2Q8IVA1 136 aa7.08□□□□□ -1.28
TNFRSF1A-211ENST00000538363 LINC00526Q96FQ7 95 aa7.08□□□□□ -1.28
TNFRSF1A-211ENST00000538363 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 PCP4L1A6NKN8 68 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 LINC00158P58513 81 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 Q6ZR54 194 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 LYSTQ99698 3801 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
TNFRSF1A-211ENST00000538363 A0A0U1RRA0 63 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 F8WDY8 70 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 PFN2P35080 140 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 TSPEAR-AS2P59090 65 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 SYCNQ0VAF6 134 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 C2orf82Q6UX34 121 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 MIEN1Q9BRT3 115 aa7.06□□□□□ -1.28
TNFRSF1A-211ENST00000538363 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 BOD1L2Q8IYS8 172 aa7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 C15orf56Q8N910 161 aa7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 NTN5Q8WTR8 489 aaPredicted RBP7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 C2orf48Q96LS8 159 aa7.05□□□□□ -1.28
TNFRSF1A-211ENST00000538363 TMEM238C9JI98 176 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 DLEU1O43261 78 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 GCSHP23434 173 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 UNQ6190/PRO20217Q6UXQ8 127 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 CARD19Q96LW7 228 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
TNFRSF1A-211ENST00000538363 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
TNFRSF1A-211ENST00000538363 COPS9Q8WXC6 57 aa7.03□□□□□ -1.28
TNFRSF1A-211ENST00000538363 ERG28Q9UKR5 140 aa7.03□□□□□ -1.28
TNFRSF1A-211ENST00000538363 TRBV30A0A0K0K1B3 111 aa7.02□□□□□ -1.29
TNFRSF1A-211ENST00000538363 SMIM13P0DJ93 91 aa7.02□□□□□ -1.29
TNFRSF1A-211ENST00000538363 KIAA0087Q14695 138 aa7.02□□□□□ -1.29
TNFRSF1A-211ENST00000538363 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
TNFRSF1A-211ENST00000538363 A0A087WTM6 91 aa7.01□□□□□ -1.29
TNFRSF1A-211ENST00000538363 Q6ZRU5 148 aa7.01□□□□□ -1.29
TNFRSF1A-211ENST00000538363 DDTP30046 118 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 PTTG1IPP53801 180 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 NPC2P61916 151 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 RPL18AQ02543 176 aaKnown RBP7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 COX17Q14061 63 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 C10orf25Q5T742 122 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 Q6ZRN7 208 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 Q8N814 137 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 DPH3Q96FX2 82 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 DNAH1Q9P2D7 4330 aa7□□□□□ -1.29
TNFRSF1A-211ENST00000538363 RYR3Q15413 4870 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 TIMM17BO60830 172 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 WFDC2Q14508 124 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 C9orf116Q5BN46 136 aaPredicted RBP6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 VPS13DQ5THJ4 4388 aa6.99□□□□□ -1.29
TNFRSF1A-211ENST00000538363 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 CTAG1AP78358 180 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 GAGE2BQ13066 116 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 RNF151Q2KHN1 245 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 GAGE2EQ4V326 116 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 Q6ZVH6 145 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 MIR7-3HGQ8N6C7 128 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 GAGE2DQ9UEU5 116 aa6.98□□□□□ -1.29
TNFRSF1A-211ENST00000538363 IGLV5-52A0A0A0MRZ9 124 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 M0R143 59 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 HSD52Q0P140 79 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 BATFQ16520 125 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 TAL2Q16559 108 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 LINC00336Q6ZUF6 198 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 DAND5Q8N907 189 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 RYR2Q92736 4967 aa6.97□□□□□ -1.29
TNFRSF1A-211ENST00000538363 RTL8CO15255 209 aa6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 IFITM1P13164 125 aa6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 RPL24P83731 157 aaKnown RBP6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 SPANXB1Q9NS25 103 aaPredicted RBP6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 SACSQ9NZJ4 4579 aa6.96□□□□□ -1.3
TNFRSF1A-211ENST00000538363 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 NDUFC2-KCTD14E9PQ53 114 aa6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 HINT1P49773 126 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 ADAMTSL4-AS1Q5T5F5 129 aa6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 C2orf91Q6ZV80 131 aa6.95□□□□□ -1.3
TNFRSF1A-211ENST00000538363 SPANXDQ9BXN6 97 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms