RNA–Protein interactions for RNA: ENST00000535765.5

VPS37B-203, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-203ENST00000535765 HERC1Q15751 4861 aa14.7□□□□□ -0.06
VPS37B-203ENST00000535765 PDZD11Q5EBL8 140 aa14.68□□□□□ -0.06
VPS37B-203ENST00000535765 C6orf226Q5I0X4 101 aa14.68□□□□□ -0.06
VPS37B-203ENST00000535765 C2orf82Q6UX34 121 aa14.67□□□□□ -0.06
VPS37B-203ENST00000535765 LINC00469Q8N7U9 141 aa14.67□□□□□ -0.06
VPS37B-203ENST00000535765 CHCHD1Q96BP2 118 aaKnown RBP14.67□□□□□ -0.06
VPS37B-203ENST00000535765 ATP5LO75964 103 aa14.66□□□□□ -0.06
VPS37B-203ENST00000535765 OXTP01178 125 aa14.66□□□□□ -0.06
VPS37B-203ENST00000535765 CKS1BP61024 79 aa14.66□□□□□ -0.06
VPS37B-203ENST00000535765 Q6ZRP5 223 aa14.66□□□□□ -0.06
VPS37B-203ENST00000535765 TOMM7Q9P0U1 55 aa14.66□□□□□ -0.06
VPS37B-203ENST00000535765 A0A1W2PNN7 141 aa14.65□□□□□ -0.06
VPS37B-203ENST00000535765 SMIM1B2RUZ4 78 aa14.64□□□□□ -0.07
VPS37B-203ENST00000535765 CXCL5P42830 114 aa14.64□□□□□ -0.07
VPS37B-203ENST00000535765 C9orf116Q5BN46 136 aaPredicted RBP14.64□□□□□ -0.07
VPS37B-203ENST00000535765 NDUFC2-KCTD14E9PQ53 114 aa14.63□□□□□ -0.07
VPS37B-203ENST00000535765 IGLC3P0DOY3 106 aa14.63□□□□□ -0.07
VPS37B-203ENST00000535765 PMCHL1Q16048 86 aa14.63□□□□□ -0.07
VPS37B-203ENST00000535765 PRR3P79522 188 aaKnown RBP14.61□□□□□ -0.07
VPS37B-203ENST00000535765 LRP1Q07954 4544 aaKnown RBP14.6□□□□□ -0.07
VPS37B-203ENST00000535765 F8VRH5 84 aa14.6□□□□□ -0.07
VPS37B-203ENST00000535765 H3BRM9 83 aa14.6□□□□□ -0.07
VPS37B-203ENST00000535765 TRGC2P03986 189 aa14.6□□□□□ -0.07
VPS37B-203ENST00000535765 FAT3Q8TDW7 4589 aa14.59□□□□□ -0.07
VPS37B-203ENST00000535765 NDUFA6P56556 154 aa14.59□□□□□ -0.07
VPS37B-203ENST00000535765 COX7B2Q8TF08 81 aa14.59□□□□□ -0.07
VPS37B-203ENST00000535765 COLCA2A8K830 154 aa14.58□□□□□ -0.08
VPS37B-203ENST00000535765 GAGE2EQ4V326 116 aa14.58□□□□□ -0.08
VPS37B-203ENST00000535765 GAGE2DQ9UEU5 116 aa14.58□□□□□ -0.08
VPS37B-203ENST00000535765 BAGE3Q86Y29 109 aa14.56□□□□□ -0.08
VPS37B-203ENST00000535765 SPINK8P0C7L1 97 aa14.55□□□□□ -0.08
VPS37B-203ENST00000535765 IGLV5-39A0A0G2JS06 123 aa14.54□□□□□ -0.08
VPS37B-203ENST00000535765 HSBP1O75506 76 aa14.54□□□□□ -0.08
VPS37B-203ENST00000535765 ZNF22P17026 224 aaPredicted RBP14.54□□□□□ -0.08
VPS37B-203ENST00000535765 TRAV12-1A0A0B4J245 112 aa14.53□□□□□ -0.08
VPS37B-203ENST00000535765 IFI27L1Q96BM0 104 aa14.53□□□□□ -0.08
VPS37B-203ENST00000535765 FAM168BA1KXE4 195 aa14.52□□□□□ -0.09
VPS37B-203ENST00000535765 ODF1Q14990 250 aa14.52□□□□□ -0.09
VPS37B-203ENST00000535765 C9orf129Q5T035 196 aaKnown RBP14.52□□□□□ -0.09
VPS37B-203ENST00000535765 PHF5AQ7RTV0 110 aaKnown RBP14.52□□□□□ -0.09
VPS37B-203ENST00000535765 C11orf86A6NJI1 115 aa14.5□□□□□ -0.09
VPS37B-203ENST00000535765 KRTAP7-1Q8IUC3 87 aa14.5□□□□□ -0.09
VPS37B-203ENST00000535765 CHTOPQ9Y3Y2 248 aaKnown RBP14.5□□□□□ -0.09
VPS37B-203ENST00000535765 SRSF9Q13242 221 aaKnown RBP eCLIP14.48□□□□□ -0.09
VPS37B-203ENST00000535765 SPINK6Q6UWN8 80 aa14.48□□□□□ -0.09
VPS37B-203ENST00000535765 FAM19A5Q7Z5A7 132 aaPredicted RBP14.48□□□□□ -0.09
VPS37B-203ENST00000535765 FAM19A2Q8N3H0 131 aa14.48□□□□□ -0.09
VPS37B-203ENST00000535765 PSORS1C2Q9UIG4 136 aa14.48□□□□□ -0.09
VPS37B-203ENST00000535765 SERF1AO75920 110 aa14.46□□□□□ -0.09
VPS37B-203ENST00000535765 LINC00310P59036 64 aa14.46□□□□□ -0.09
VPS37B-203ENST00000535765 TMEM170BQ5T4T1 132 aa14.46□□□□□ -0.09
VPS37B-203ENST00000535765 M0QXV9 152 aa14.45□□□□□ -0.1
VPS37B-203ENST00000535765 SFTA2Q6UW10 78 aa14.45□□□□□ -0.1
VPS37B-203ENST00000535765 SERTAD4-AS1Q5TG53 156 aa14.44□□□□□ -0.1
VPS37B-203ENST00000535765 LEPROTL1O95214 131 aa14.43□□□□□ -0.1
VPS37B-203ENST00000535765 XAGE1AQ9HD64 81 aa14.43□□□□□ -0.1
VPS37B-203ENST00000535765 MT1HL1P0DM35 61 aa14.41□□□□□ -0.1
VPS37B-203ENST00000535765 TP73-AS1Q9UF72 201 aa14.41□□□□□ -0.1
VPS37B-203ENST00000535765 PLA2G2DQ9UNK4 145 aa14.41□□□□□ -0.1
VPS37B-203ENST00000535765 TMEM223A0PJW6 202 aa14.4□□□□□ -0.1
VPS37B-203ENST00000535765 COX17Q14061 63 aa14.4□□□□□ -0.1
VPS37B-203ENST00000535765 C1orf137Q5JT78 98 aa14.4□□□□□ -0.1
VPS37B-203ENST00000535765 NUPR1O60356 82 aa14.39□□□□□ -0.11
VPS37B-203ENST00000535765 SCO1O75880 301 aa14.39□□□□□ -0.11
VPS37B-203ENST00000535765 KRTAP11-1Q8IUC1 163 aa14.39□□□□□ -0.11
VPS37B-203ENST00000535765 HSPB8Q9UJY1 196 aa14.39□□□□□ -0.11
VPS37B-203ENST00000535765 C22orf24Q9Y442 160 aa14.39□□□□□ -0.11
VPS37B-203ENST00000535765 LBHQ53QV2 105 aaPredicted RBP14.38□□□□□ -0.11
VPS37B-203ENST00000535765 UBE2BP63146 152 aa14.37□□□□□ -0.11
VPS37B-203ENST00000535765 REG3GQ6UW15 175 aa14.37□□□□□ -0.11
VPS37B-203ENST00000535765 IGLV7-43P04211 117 aa14.36□□□□□ -0.11
VPS37B-203ENST00000535765 ZNF625Q96I27 306 aaPredicted RBP14.36□□□□□ -0.11
VPS37B-203ENST00000535765 LINC01600Q96MT4 127 aa14.36□□□□□ -0.11
VPS37B-203ENST00000535765 ERG28Q9UKR5 140 aa14.35□□□□□ -0.11
VPS37B-203ENST00000535765 IGLV5-37A0A075B6J1 123 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BKO60814 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BJP06899 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BOP23527 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BBP33778 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 PFN2P35080 140 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BDP58876 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BCP62807 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST2H2BEQ16778 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BHQ93079 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BNQ99877 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 HIST1H2BMQ99879 126 aa14.33□□□□□ -0.12
VPS37B-203ENST00000535765 MRPL55Q7Z7F7 128 aaKnown RBP14.32□□□□□ -0.12
VPS37B-203ENST00000535765 TNXBP22105 4242 aa14.31□□□□□ -0.12
VPS37B-203ENST00000535765 FABP4P15090 132 aa14.31□□□□□ -0.12
VPS37B-203ENST00000535765 PLNP26678 52 aa14.31□□□□□ -0.12
VPS37B-203ENST00000535765 H0Y8G0 127 aa14.3□□□□□ -0.12
VPS37B-203ENST00000535765 DIRC1Q969H9 104 aa14.29□□□□□ -0.12
VPS37B-203ENST00000535765 SND1-IT1Q9HBX3 110 aa14.28□□□□□ -0.12
VPS37B-203ENST00000535765 MAP1LC3CQ9BXW4 147 aa14.27□□□□□ -0.13
VPS37B-203ENST00000535765 DPM2O94777 84 aa14.26□□□□□ -0.13
VPS37B-203ENST00000535765 HERV-K104P63124 156 aa14.26□□□□□ -0.13
VPS37B-203ENST00000535765 LINC00167Q96N53 147 aa14.26□□□□□ -0.13
VPS37B-203ENST00000535765 NKAPP1Q8N9T2 125 aa14.25□□□□□ -0.13
VPS37B-203ENST00000535765 H0Y9J4 135 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms