RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 TRBV10-1A0A0K0K1A3 114 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 DUXBA0A1W2PPF3 345 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 C19orf71A6NCJ1 209 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 G3V3Q6 166 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 M0R381 172 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 SSNA1O43805 119 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 APOMO95445 188 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 IL5P05113 134 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 ESDP10768 282 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 TMBIM6P55061 237 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 DEFA1P59665 94 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 DEFA3P59666 94 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 SCGB2B2Q4G0G5 96 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 KRTAP8-1Q8IUC2 63 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 S100ZQ8WXG8 99 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 LINC00526Q96FQ7 95 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 MAP1LC3AQ9H492 121 aa1.98□□□□□ -2.09
ECHDC1-223ENST00000534442 IGKV2-40A0A087WW87 121 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 ZNF73O43830 326 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 NUPR1O60356 82 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 IGKV2D-40P01614 121 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 TSPEAR-AS2P59090 65 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 S100A10P60903 97 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 MEF2BQ02080 365 aaPredicted RBP1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 RGS21Q2M5E4 152 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 TMEM97Q5BJF2 176 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 RASL11AQ6T310 242 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 CYP2G1PQ6ZSU1 146 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 LINC00305Q7Z4B0 112 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 LHFPL1Q86WI0 220 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 OR5C1Q8NGR4 320 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 OR5H6Q8NGV6 325 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 TP53RKQ96S44 253 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 FXYD6Q9H0Q3 95 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 SMDT1Q9H4I9 107 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 NPVFQ9HCQ7 196 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 NDUFB11Q9NX14 153 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 ALG5Q9Y673 324 aa1.97□□□□□ -2.09
ECHDC1-223ENST00000534442 TRBV25-1A0A075B6N4 114 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 TRAV21A0A0B4J279 112 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 IGHV1-58A0A0C4DH39 117 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 TRDV1A0A1B0GX56 115 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 IFITM5A6NNB3 132 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 PMP2P02689 132 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 AKR1C1Q04828 323 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 JOSD1Q15040 202 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 PATE2Q6UY27 113 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 TOMM5Q8N4H5 51 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 S100A16Q96FQ6 103 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 FKBP14Q9NWM8 211 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 TP73-AS1Q9UF72 201 aa1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 PAIP2BQ9ULR5 123 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 LSM2Q9Y333 95 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-223ENST00000534442 TRBV19A0A075B6N1 114 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 C3orf85A0A1B0GTC6 90 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 DISC1C4P0D8 188 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 ATP6V0CP27449 155 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 RPL12P30050 165 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 FAUP35544 74 aaKnown RBP1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 TMEM91Q6ZNR0 172 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 COMMD7Q86VX2 200 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 AQP10Q96PS8 301 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 LENEPQ9Y5L5 61 aa1.95□□□□□ -2.1
ECHDC1-223ENST00000534442 TRAV1-2A0A0B4J238 106 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 INMT-MINDY4F8WBC2 141 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 LYRM1O43325 122 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 SPINK1P00995 79 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 IL7P13232 177 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 NKX2-5P52952 324 aaPredicted RBP1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 AP3S2P59780 193 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 PDE6HQ13956 83 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 IQCJQ1A5X6 159 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 RNASE10Q5GAN6 216 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 SAPCD1Q5SSQ6 148 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 FAM74A4Q5TZK3 123 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 AKAP14Q86UN6 197 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 EXOC3-AS1Q8N2X6 119 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 NUP35Q8NFH5 326 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 TIMM9Q9Y5J7 89 aa1.94□□□□□ -2.1
ECHDC1-223ENST00000534442 FXYD6-FXYD2A0A087WZ82 144 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 IGKV3OR2-268A0A0C4DH90 116 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 C20orf202A1L168 122 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 BCE1O60756 84 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 SIX6O95475 246 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 AKAIN1P0CW23 69 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 SULT1A3P0DMM9 295 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 SULT1A4P0DMN0 295 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 CSN1S1P47710 185 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 TAS2R45P59539 299 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 C1orf195Q5TG92 126 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 OR2D3Q8NGH3 330 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 DERL1Q9BUN8 251 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 CCDC32Q9BV29 185 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 NKX6-2Q9C056 277 aaPredicted RBP1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 NAA60Q9H7X0 242 aa1.93□□□□□ -2.1
ECHDC1-223ENST00000534442 UQCC1Q9NVA1 299 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms