RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 LOC107984640A0A0U1RRK4 108 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 PANO1I0J062 215 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 CHTF8P0CG12 524 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 CKS1BP61024 79 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 CIRBPQ14011 172 aaKnown RBP15.46■□□□□ 0.07
SIPA1-210ENST00000534406 TMEM170BQ5T4T1 132 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 C2orf82Q6UX34 121 aa15.46■□□□□ 0.07
SIPA1-210ENST00000534406 ODF1Q14990 250 aa15.45■□□□□ 0.06
SIPA1-210ENST00000534406 SPACA4Q8TDM5 124 aa15.45■□□□□ 0.06
SIPA1-210ENST00000534406 C6orf48Q9UBA6 75 aa15.45■□□□□ 0.06
SIPA1-210ENST00000534406 A0A096LNI7 61 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 IGKV2-24A0A0C4DH68 120 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 CXCL5P42830 114 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 CIRBP-AS1Q8TBR5 109 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 COX7B2Q8TF08 81 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 MAP1LC3CQ9BXW4 147 aa15.44■□□□□ 0.06
SIPA1-210ENST00000534406 TRBV30A0A0K0K1B3 111 aa15.43■□□□□ 0.06
SIPA1-210ENST00000534406 IGLV5-39A0A0G2JS06 123 aa15.42■□□□□ 0.06
SIPA1-210ENST00000534406 LINC00474Q9P2X8 69 aa15.42■□□□□ 0.06
SIPA1-210ENST00000534406 FAT1Q14517 4588 aa15.41■□□□□ 0.06
SIPA1-210ENST00000534406 RPL18AQ02543 176 aaKnown RBP15.41■□□□□ 0.06
SIPA1-210ENST00000534406 PTTG1IPP53801 180 aa15.4■□□□□ 0.06
SIPA1-210ENST00000534406 MAJINQ3KP22 176 aa15.4■□□□□ 0.06
SIPA1-210ENST00000534406 DPH3Q96FX2 82 aa15.4■□□□□ 0.06
SIPA1-210ENST00000534406 PLNP26678 52 aa15.39■□□□□ 0.05
SIPA1-210ENST00000534406 GAGE2BQ13066 116 aa15.39■□□□□ 0.05
SIPA1-210ENST00000534406 Q8N1X5 172 aa15.39■□□□□ 0.05
SIPA1-210ENST00000534406 TLX1NBP0CAT3 122 aa15.38■□□□□ 0.05
SIPA1-210ENST00000534406 SMR3BP02814 79 aaPredicted RBP15.37■□□□□ 0.05
SIPA1-210ENST00000534406 A0A087WYN8 130 aa15.36■□□□□ 0.05
SIPA1-210ENST00000534406 TMEM223A0PJW6 202 aa15.36■□□□□ 0.05
SIPA1-210ENST00000534406 DPM2O94777 84 aa15.36■□□□□ 0.05
SIPA1-210ENST00000534406 C9orf116Q5BN46 136 aaPredicted RBP15.35■□□□□ 0.05
SIPA1-210ENST00000534406 PMCHL2Q9BQD1 86 aa15.35■□□□□ 0.05
SIPA1-210ENST00000534406 NDUFC2-KCTD14E9PQ53 114 aa15.34■□□□□ 0.05
SIPA1-210ENST00000534406 SYS1-DBNDD2H3BUS1 97 aa15.34■□□□□ 0.05
SIPA1-210ENST00000534406 KRTAP17-1Q9BYP8 105 aa15.34■□□□□ 0.05
SIPA1-210ENST00000534406 PLAC8Q9NZF1 115 aa15.34■□□□□ 0.05
SIPA1-210ENST00000534406 STPG4Q8N801 248 aa15.33■□□□□ 0.04
SIPA1-210ENST00000534406 IGKCP01834 107 aa15.32■□□□□ 0.04
SIPA1-210ENST00000534406 Q6ZRP5 223 aa15.32■□□□□ 0.04
SIPA1-210ENST00000534406 LINC00528Q8N1L1 170 aa15.32■□□□□ 0.04
SIPA1-210ENST00000534406 EPM2AB3EWF7 344 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 FAM229AH3BQW9 127 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 S100A6P06703 90 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 GAGE2EQ4V326 116 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 Q5VSD8 79 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 SFTA2Q6UW10 78 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 PET117Q6UWS5 81 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 GAGE2DQ9UEU5 116 aa15.3■□□□□ 0.04
SIPA1-210ENST00000534406 C3orf79P0CE67 100 aa15.29■□□□□ 0.04
SIPA1-210ENST00000534406 KRTDAPP60985 99 aa15.28■□□□□ 0.04
SIPA1-210ENST00000534406 HERVK_113P61574 105 aa15.28■□□□□ 0.04
SIPA1-210ENST00000534406 LINC01545Q5VT33 79 aa15.28■□□□□ 0.04
SIPA1-210ENST00000534406 HIST3H2BBQ8N257 126 aa15.27■□□□□ 0.04
SIPA1-210ENST00000534406 S100A2P29034 98 aa15.25■□□□□ 0.03
SIPA1-210ENST00000534406 ZNF625Q96I27 306 aaPredicted RBP15.24■□□□□ 0.03
SIPA1-210ENST00000534406 KRTAP4-5Q9BYR2 181 aa15.23■□□□□ 0.03
SIPA1-210ENST00000534406 VPS13BQ7Z7G8 4022 aa15.22■□□□□ 0.03
SIPA1-210ENST00000534406 A0A1W2PNN7 141 aa15.22■□□□□ 0.03
SIPA1-210ENST00000534406 C20orf202A1L168 122 aa15.22■□□□□ 0.03
SIPA1-210ENST00000534406 PLA2G1BP04054 148 aaKnown RBP15.22■□□□□ 0.03
SIPA1-210ENST00000534406 PLEKHB2Q96CS7 222 aa15.22■□□□□ 0.03
SIPA1-210ENST00000534406 LEPROTO15243 131 aa15.21■□□□□ 0.03
SIPA1-210ENST00000534406 C7orf33Q8WU49 177 aa15.21■□□□□ 0.03
SIPA1-210ENST00000534406 HIST1H2BLQ99880 126 aa15.21■□□□□ 0.03
SIPA1-210ENST00000534406 ERG28Q9UKR5 140 aa15.21■□□□□ 0.03
SIPA1-210ENST00000534406 C9orf129Q5T035 196 aaKnown RBP15.2■□□□□ 0.02
SIPA1-210ENST00000534406 XAGE1AQ9HD64 81 aa15.19■□□□□ 0.02
SIPA1-210ENST00000534406 NDUFA12Q9UI09 145 aa15.19■□□□□ 0.02
SIPA1-210ENST00000534406 ABCA13Q86UQ4 5058 aa15.19■□□□□ 0.02
SIPA1-210ENST00000534406 FAM168BA1KXE4 195 aa15.18■□□□□ 0.02
SIPA1-210ENST00000534406 PFN2P35080 140 aa15.18■□□□□ 0.02
SIPA1-210ENST00000534406 TSPEAR-AS2P59090 65 aa15.18■□□□□ 0.02
SIPA1-210ENST00000534406 RPL37AP61513 92 aaKnown RBP15.18■□□□□ 0.02
SIPA1-210ENST00000534406 SNRPEP62304 92 aaKnown RBP15.18■□□□□ 0.02
SIPA1-210ENST00000534406 FAM19A5Q7Z5A7 132 aaPredicted RBP15.18■□□□□ 0.02
SIPA1-210ENST00000534406 J3QQQ9 107 aa15.17■□□□□ 0.02
SIPA1-210ENST00000534406 COX17Q14061 63 aa15.17■□□□□ 0.02
SIPA1-210ENST00000534406 MYMXA0A1B0GTQ4 84 aa15.16■□□□□ 0.02
SIPA1-210ENST00000534406 HERV-K104P63124 156 aa15.16■□□□□ 0.02
SIPA1-210ENST00000534406 E9PLD3 99 aa15.15■□□□□ 0.02
SIPA1-210ENST00000534406 LGALS3P17931 250 aaKnown RBP15.15■□□□□ 0.02
SIPA1-210ENST00000534406 SRRM2Q9UQ35 2752 aaKnown RBP15.14■□□□□ 0.01
SIPA1-210ENST00000534406 C5orf52A6NGY3 159 aa15.13■□□□□ 0.01
SIPA1-210ENST00000534406 NMUP48645 174 aa15.13■□□□□ 0.01
SIPA1-210ENST00000534406 AKR1D1P51857 326 aa15.13■□□□□ 0.01
SIPA1-210ENST00000534406 M0QXV9 152 aa15.12■□□□□ 0.01
SIPA1-210ENST00000534406 MEIG1Q5JSS6 88 aa15.12■□□□□ 0.01
SIPA1-210ENST00000534406 LINC00158P58513 81 aa15.11■□□□□ 0.01
SIPA1-210ENST00000534406 PHF5AQ7RTV0 110 aaKnown RBP15.11■□□□□ 0.01
SIPA1-210ENST00000534406 KRTAP7-1Q8IUC3 87 aa15.11■□□□□ 0.01
SIPA1-210ENST00000534406 PCLOQ9Y6V0 5065 aa15.1■□□□□ 0.01
SIPA1-210ENST00000534406 KRTAP10-4P60372 401 aaPredicted RBP15.1■□□□□ 0.01
SIPA1-210ENST00000534406 SERTAD4-AS1Q5TG53 156 aa15.1■□□□□ 0.01
SIPA1-210ENST00000534406 SND1-IT1Q9HBX3 110 aa15.09■□□□□ 0.01
SIPA1-210ENST00000534406 LINC00587B1AMM8 73 aa15.08■□□□□ 0
SIPA1-210ENST00000534406 A0A0U1RRA0 63 aa15.07■□□□□ 0
SIPA1-210ENST00000534406 SMIM13P0DJ93 91 aa15.07■□□□□ 0
SIPA1-210ENST00000534406 ATOH7Q8N100 152 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms