RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 SERF1AO75920 110 aa8.42□□□□□ -1.06
CMTM1-219ENST00000533953 PRSS2P07478 247 aa8.42□□□□□ -1.06
CMTM1-219ENST00000533953 RPL37AP61513 92 aaKnown RBP8.42□□□□□ -1.06
CMTM1-219ENST00000533953 RNF151Q2KHN1 245 aa8.42□□□□□ -1.06
CMTM1-219ENST00000533953 FLG2Q5D862 2391 aaPredicted RBP8.42□□□□□ -1.06
CMTM1-219ENST00000533953 IGLV5-45A0A087WSX0 123 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 HSBP1O75506 76 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 ATP5LO75964 103 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 HNRNPA3P51991 378 aaKnown RBP8.41□□□□□ -1.06
CMTM1-219ENST00000533953 GAGE2EQ4V326 116 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 Q6ZRP5 223 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 GAGE2DQ9UEU5 116 aa8.41□□□□□ -1.06
CMTM1-219ENST00000533953 F8WDY8 70 aa8.4□□□□□ -1.06
CMTM1-219ENST00000533953 IGLC3P0DOY3 106 aa8.4□□□□□ -1.06
CMTM1-219ENST00000533953 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
CMTM1-219ENST00000533953 CKS1BP61024 79 aa8.4□□□□□ -1.06
CMTM1-219ENST00000533953 Q8IZM0 81 aa8.4□□□□□ -1.06
CMTM1-219ENST00000533953 IFI27L1Q96BM0 104 aa8.4□□□□□ -1.06
CMTM1-219ENST00000533953 FAM168BA1KXE4 195 aa8.39□□□□□ -1.07
CMTM1-219ENST00000533953 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
CMTM1-219ENST00000533953 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
CMTM1-219ENST00000533953 LINC00474Q9P2X8 69 aa8.39□□□□□ -1.07
CMTM1-219ENST00000533953 CHTOPQ9Y3Y2 248 aaKnown RBP8.38□□□□□ -1.07
CMTM1-219ENST00000533953 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
CMTM1-219ENST00000533953 H0Y8G0 127 aa8.37□□□□□ -1.07
CMTM1-219ENST00000533953 FABP4P15090 132 aa8.37□□□□□ -1.07
CMTM1-219ENST00000533953 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
CMTM1-219ENST00000533953 TLX1NBP0CAT3 122 aa8.36□□□□□ -1.07
CMTM1-219ENST00000533953 TMEM170BQ5T4T1 132 aa8.36□□□□□ -1.07
CMTM1-219ENST00000533953 PHF5AQ7RTV0 110 aaKnown RBP8.36□□□□□ -1.07
CMTM1-219ENST00000533953 KRTAP7-1Q8IUC3 87 aa8.36□□□□□ -1.07
CMTM1-219ENST00000533953 NDUFC2-KCTD14E9PQ53 114 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 F8VRH5 84 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 H3BRM9 83 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BKO60814 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BJP06899 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BOP23527 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BBP33778 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BDP58876 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BCP62807 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST2H2BEQ16778 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.35□□□□□ -1.07
CMTM1-219ENST00000533953 C9orf129Q5T035 196 aaKnown RBP8.35□□□□□ -1.07
CMTM1-219ENST00000533953 C7orf33Q8WU49 177 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BHQ93079 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BNQ99877 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 HIST1H2BMQ99879 126 aa8.35□□□□□ -1.07
CMTM1-219ENST00000533953 IGLV5-39A0A0G2JS06 123 aa8.34□□□□□ -1.07
CMTM1-219ENST00000533953 LEPROTL1O95214 131 aa8.34□□□□□ -1.07
CMTM1-219ENST00000533953 FAM19A5Q7Z5A7 132 aaPredicted RBP8.34□□□□□ -1.07
CMTM1-219ENST00000533953 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
CMTM1-219ENST00000533953 TRAV12-1A0A0B4J245 112 aa8.33□□□□□ -1.08
CMTM1-219ENST00000533953 KRTAP11-1Q8IUC1 163 aa8.33□□□□□ -1.08
CMTM1-219ENST00000533953 PMCHL2Q9BQD1 86 aa8.33□□□□□ -1.08
CMTM1-219ENST00000533953 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
CMTM1-219ENST00000533953 ATP6V1G1O75348 118 aa8.31□□□□□ -1.08
CMTM1-219ENST00000533953 CXCL5P42830 114 aa8.31□□□□□ -1.08
CMTM1-219ENST00000533953 PRR3P79522 188 aaKnown RBP8.31□□□□□ -1.08
CMTM1-219ENST00000533953 ODF1Q14990 250 aa8.31□□□□□ -1.08
CMTM1-219ENST00000533953 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
CMTM1-219ENST00000533953 MYCBP2O75592 4640 aa8.31□□□□□ -1.08
CMTM1-219ENST00000533953 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
CMTM1-219ENST00000533953 PFN2P35080 140 aa8.29□□□□□ -1.08
CMTM1-219ENST00000533953 HSPB8Q9UJY1 196 aa8.29□□□□□ -1.08
CMTM1-219ENST00000533953 PSORS1C2Q9UIG4 136 aa8.28□□□□□ -1.08
CMTM1-219ENST00000533953 M0QXV9 152 aa8.27□□□□□ -1.09
CMTM1-219ENST00000533953 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
CMTM1-219ENST00000533953 S100A1P23297 94 aa8.26□□□□□ -1.09
CMTM1-219ENST00000533953 A0A0U1RRA0 63 aa8.25□□□□□ -1.09
CMTM1-219ENST00000533953 ERG28Q9UKR5 140 aa8.25□□□□□ -1.09
CMTM1-219ENST00000533953 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
CMTM1-219ENST00000533953 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
CMTM1-219ENST00000533953 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
CMTM1-219ENST00000533953 J3QL48 77 aa8.24□□□□□ -1.09
CMTM1-219ENST00000533953 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
CMTM1-219ENST00000533953 C1orf137Q5JT78 98 aa8.24□□□□□ -1.09
CMTM1-219ENST00000533953 MAP1LC3CQ9BXW4 147 aa8.24□□□□□ -1.09
CMTM1-219ENST00000533953 DPM2O94777 84 aa8.23□□□□□ -1.09
CMTM1-219ENST00000533953 UBE2BP63146 152 aa8.23□□□□□ -1.09
CMTM1-219ENST00000533953 SRSF9Q13242 221 aaKnown RBP eCLIP8.23□□□□□ -1.09
CMTM1-219ENST00000533953 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
CMTM1-219ENST00000533953 GAGE10A6NGK3 116 aa8.22□□□□□ -1.09
CMTM1-219ENST00000533953 SYS1-DBNDD2H3BUS1 97 aa8.22□□□□□ -1.09
CMTM1-219ENST00000533953 IGKCP01834 107 aa8.22□□□□□ -1.09
CMTM1-219ENST00000533953 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
CMTM1-219ENST00000533953 FAT3Q8TDW7 4589 aa8.21□□□□□ -1.1
CMTM1-219ENST00000533953 PLNP26678 52 aa8.21□□□□□ -1.1
CMTM1-219ENST00000533953 LINC00158P58513 81 aa8.21□□□□□ -1.1
CMTM1-219ENST00000533953 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.1
CMTM1-219ENST00000533953 Q8NDZ9 215 aa8.21□□□□□ -1.1
CMTM1-219ENST00000533953 RPL37AP8A6NKH3 93 aa8.2□□□□□ -1.1
CMTM1-219ENST00000533953 SMIM13P0DJ93 91 aa8.2□□□□□ -1.1
CMTM1-219ENST00000533953 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
CMTM1-219ENST00000533953 LEPROTO15243 131 aa8.19□□□□□ -1.1
CMTM1-219ENST00000533953 C3orf79P0CE67 100 aa8.19□□□□□ -1.1
CMTM1-219ENST00000533953 MRPL55Q7Z7F7 128 aaKnown RBP8.19□□□□□ -1.1
CMTM1-219ENST00000533953 LINC00167Q96N53 147 aa8.19□□□□□ -1.1
CMTM1-219ENST00000533953 HERC1Q15751 4861 aa8.19□□□□□ -1.1
CMTM1-219ENST00000533953 OXTP01178 125 aa8.18□□□□□ -1.1
CMTM1-219ENST00000533953 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms