RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 C3orf22Q8N5N4 141 aa3.01□□□□□ -1.93
CTSC-208ENST00000533897 SPATA3Q8NHX4 192 aa3.01□□□□□ -1.93
CTSC-208ENST00000533897 FAM236AA0A1B0GUQ0 79 aa3.01□□□□□ -1.93
CTSC-208ENST00000533897 FAM236BA0A1B0GV22 79 aa3.01□□□□□ -1.93
CTSC-208ENST00000533897 H0YGX0 51 aa3.01□□□□□ -1.93
CTSC-208ENST00000533897 CMC4P56277 68 aaPredicted RBP3.01□□□□□ -1.93
CTSC-208ENST00000533897 WFDC11Q8NEX6 87 aa3□□□□□ -1.93
CTSC-208ENST00000533897 OR13C6PQ8NH95 151 aa3□□□□□ -1.93
CTSC-208ENST00000533897 TMEM126AQ9H061 195 aa3□□□□□ -1.93
CTSC-208ENST00000533897 OTOGQ6ZRI0 2925 aa3□□□□□ -1.93
CTSC-208ENST00000533897 DNAH9Q9NYC9 4486 aa3□□□□□ -1.93
CTSC-208ENST00000533897 COX17Q14061 63 aa3□□□□□ -1.93
CTSC-208ENST00000533897 POLQO75417 2590 aa3□□□□□ -1.93
CTSC-208ENST00000533897 EPM2AB3EWF7 344 aa3□□□□□ -1.93
CTSC-208ENST00000533897 INAFM2P0DMQ5 153 aa3□□□□□ -1.93
CTSC-208ENST00000533897 A0A0U1RRA0 63 aa3□□□□□ -1.93
CTSC-208ENST00000533897 UQCRQO14949 82 aa3□□□□□ -1.93
CTSC-208ENST00000533897 PAX4O43316 350 aa3□□□□□ -1.93
CTSC-208ENST00000533897 CCKP06307 115 aa3□□□□□ -1.93
CTSC-208ENST00000533897 LINC00482Q8N8I6 264 aa3□□□□□ -1.93
CTSC-208ENST00000533897 C11orf44Q8N8P7 122 aa3□□□□□ -1.93
CTSC-208ENST00000533897 EPG5Q9HCE0 2579 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 VPREB1P12018 145 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 COX7CP15954 63 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 DGAT2L7PQ6IED9 249 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 KRTAP26-1Q6PEX3 210 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 Q8N814 137 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 CRPP02741 224 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 PRR34Q9NV39 138 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 TENM1Q9UKZ4 2725 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 IGLV6-57P01721 117 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 Q8N3U1 123 aa2.99□□□□□ -1.93
CTSC-208ENST00000533897 HIVEP1P15822 2718 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 A0A0J9YWU9 116 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 OXTP01178 125 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 IGHV4-30-4P0DP06 118 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 C14orf132Q9NPU4 83 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 PKIGQ9Y2B9 76 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 LOC110117498A0A087WWA1 95 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 GVQW2A0A096LPI5 108 aaPredicted RBP2.98□□□□□ -1.93
CTSC-208ENST00000533897 CELA1Q9UNI1 258 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 NCR3O14931 201 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 HILS1P60008 231 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 RPL18AQ02543 176 aaKnown RBP2.98□□□□□ -1.93
CTSC-208ENST00000533897 HUWE1Q7Z6Z7 4374 aaKnown RBP2.98□□□□□ -1.93
CTSC-208ENST00000533897 DNAH10Q8IVF4 4471 aa2.98□□□□□ -1.93
CTSC-208ENST00000533897 SMIM9A6NGZ8 99 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 UBE2L6O14933 153 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 LECT2O14960 151 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 WIPF1O43516 503 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 RPS28P62857 69 aaKnown RBP2.97□□□□□ -1.93
CTSC-208ENST00000533897 C9orf66Q5T8R8 295 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 CD164L2Q6UWJ8 174 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 FLNAP21333 2647 aaKnown RBP2.97□□□□□ -1.93
CTSC-208ENST00000533897 DNAH7Q8WXX0 4024 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 PRR3P79522 188 aaKnown RBP2.97□□□□□ -1.93
CTSC-208ENST00000533897 Q6ZQT0 140 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 C6orf223Q8N319 242 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 TRBV10-3A0A0K0K1G6 114 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 LINC00575Q6W349 94 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 Q8NAQ8 132 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 ZNF462Q96JM2 2506 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 SLPIP03973 132 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 MUC7Q8TAX7 377 aa2.97□□□□□ -1.93
CTSC-208ENST00000533897 TRGV2A0A075B6R0 118 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 M0R2N4 97 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 RPL35AP18077 110 aaKnown RBP2.96□□□□□ -1.94
CTSC-208ENST00000533897 C10orf25Q5T742 122 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 GAGE2AQ6NT46 116 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 MYO18BQ8IUG5 2567 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 TRGV4A0A0C4DH28 118 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 GYPEP15421 78 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 ATOX1O00244 68 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 LINC00158P58513 81 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 ORMDL1Q9P0S3 153 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 PRO0255Q9UI72 69 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 NOTCH3Q9UM47 2321 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 SPG11Q96JI7 2443 aa2.96□□□□□ -1.94
CTSC-208ENST00000533897 LRRK2Q5S007 2527 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 LYRM9A8MSI8 78 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 A0A087WVE0 104 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 TRBV7-6A0A0J9YX20 115 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 ENHOQ6UWT2 76 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 PFN2P35080 140 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 C9orf116Q5BN46 136 aaPredicted RBP2.95□□□□□ -1.94
CTSC-208ENST00000533897 ATP5EP2Q5VTU8 51 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 SERP2Q8N6R1 65 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 CHCHD10Q8WYQ3 142 aaPredicted RBP2.95□□□□□ -1.94
CTSC-208ENST00000533897 PTPN13Q12923 2485 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 ABCA12Q86UK0 2595 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 TRBV7-4A0A0J9YYF1 115 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 XCL1P47992 114 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 C3orf56Q8N813 242 aa2.95□□□□□ -1.94
CTSC-208ENST00000533897 ITPR2Q14571 2701 aa2.94□□□□□ -1.94
CTSC-208ENST00000533897 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
CTSC-208ENST00000533897 TMEM256-PLSCR3K7ERE1 68 aa2.94□□□□□ -1.94
CTSC-208ENST00000533897 BCE1O60756 84 aa2.94□□□□□ -1.94
CTSC-208ENST00000533897 LINC00269Q8N2A0 174 aa2.94□□□□□ -1.94
CTSC-208ENST00000533897 GCN1Q92616 2671 aaKnown RBP2.94□□□□□ -1.94
CTSC-208ENST00000533897 USP17L23D6RBM5 183 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms