RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 BAGE3Q86Y29 109 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 UBE2D4Q9Y2X8 147 aa7.8□□□□□ -1.16
CAPRIN1-213ENST00000533562 TIMM21Q9BVV7 248 aa7.79□□□□□ -1.16
CAPRIN1-213ENST00000533562 GNB1LQ9BYB4 327 aa7.79□□□□□ -1.16
CAPRIN1-213ENST00000533562 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 RPL32P62910 135 aaKnown RBP7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 VAMP3Q15836 100 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 MRPL54Q6P161 138 aaKnown RBP7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 MTURNQ8N3F0 131 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 PMCHL2Q9BQD1 86 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
CAPRIN1-213ENST00000533562 UBR4Q5T4S7 5183 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 IGLV4-69A0A075B6H9 119 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 LOC107984640A0A0U1RRK4 108 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 APOMO95445 188 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 PRR3P79522 188 aaKnown RBP7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 RNF151Q2KHN1 245 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
CAPRIN1-213ENST00000533562 A0A1B0GV72 72 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 TNFRSF6BO95407 300 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 HBBP68871 147 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 C2orf48Q96LS8 159 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 CAMK2N2Q96S95 79 aa7.76□□□□□ -1.17
CAPRIN1-213ENST00000533562 GAGE2BQ13066 116 aa7.75□□□□□ -1.17
CAPRIN1-213ENST00000533562 SPINK6Q6UWN8 80 aa7.75□□□□□ -1.17
CAPRIN1-213ENST00000533562 Q6ZRP5 223 aa7.75□□□□□ -1.17
CAPRIN1-213ENST00000533562 Q6ZUT4 128 aa7.75□□□□□ -1.17
CAPRIN1-213ENST00000533562 D6R8Y8 96 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 H3BS24 57 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 SERF1AO75920 110 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 LINC01600Q96MT4 127 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 SMIM2Q9BVW6 85 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 SPANXA1Q9NS26 97 aa7.74□□□□□ -1.17
CAPRIN1-213ENST00000533562 KRTDAPP60985 99 aa7.73□□□□□ -1.17
CAPRIN1-213ENST00000533562 RPL39P62891 51 aaKnown RBP7.73□□□□□ -1.17
CAPRIN1-213ENST00000533562 REG3GQ6UW15 175 aa7.73□□□□□ -1.17
CAPRIN1-213ENST00000533562 A0A1B0GXF2 115 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 F8WDY8 70 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 SEC11AP67812 179 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 MRPS36P82909 103 aaKnown RBP7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 ATP5L2Q7Z4Y8 100 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 ORMDL3Q8N138 153 aa7.72□□□□□ -1.17
CAPRIN1-213ENST00000533562 TNXBP22105 4242 aa7.71□□□□□ -1.18
CAPRIN1-213ENST00000533562 J3QR89 54 aa7.71□□□□□ -1.18
CAPRIN1-213ENST00000533562 NPYP01303 97 aa7.71□□□□□ -1.18
CAPRIN1-213ENST00000533562 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
CAPRIN1-213ENST00000533562 IGHV3OR16-9A0A0B4J2B5 98 aa7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 RPL18AQ02543 176 aaKnown RBP7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 FAM104AQ969W3 186 aa7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 PRELID3AQ96N28 172 aa7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 OPRPNQ99935 248 aaPredicted RBP7.7□□□□□ -1.18
CAPRIN1-213ENST00000533562 A0A0J9YXV3 536 aa7.69□□□□□ -1.18
CAPRIN1-213ENST00000533562 IFI27P40305 119 aaPredicted RBP7.69□□□□□ -1.18
CAPRIN1-213ENST00000533562 HINT1P49773 126 aaPredicted RBP7.69□□□□□ -1.18
CAPRIN1-213ENST00000533562 C9orf116Q5BN46 136 aaPredicted RBP7.69□□□□□ -1.18
CAPRIN1-213ENST00000533562 MRPL35Q9NZE8 188 aaKnown RBP7.69□□□□□ -1.18
CAPRIN1-213ENST00000533562 NDUFA1O15239 70 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 NUPR1O60356 82 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 C3orf79P0CE67 100 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 LCE2CQ5TA81 110 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 SLC25A34Q6PIV7 304 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 PYGO1Q9Y3Y4 419 aa7.68□□□□□ -1.18
CAPRIN1-213ENST00000533562 A6NDN8 102 aa7.67□□□□□ -1.18
CAPRIN1-213ENST00000533562 PRSS47A8MTI9 375 aa7.67□□□□□ -1.18
CAPRIN1-213ENST00000533562 LINC00310P59036 64 aa7.67□□□□□ -1.18
CAPRIN1-213ENST00000533562 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 HSBP1O75506 76 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 TMEM141Q96I45 108 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 PSORS1C2Q9UIG4 136 aa7.66□□□□□ -1.18
CAPRIN1-213ENST00000533562 A0A087WZ39 114 aa7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 LOC389332A0A1B0GUA5 103 aa7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 GAGE10A6NGK3 116 aa7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 BVES-AS1Q5T3Y7 98 aa7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 UNQ6190/PRO20217Q6UXQ8 127 aa7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 CHCHD1Q96BP2 118 aaKnown RBP7.65□□□□□ -1.18
CAPRIN1-213ENST00000533562 IGLV4-3A0A075B6K6 122 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 H3BRM9 83 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 TLX1NBP0CAT3 122 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 C1orf137Q5JT78 98 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 C10orf25Q5T742 122 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 FA2HQ7L5A8 372 aa7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
CAPRIN1-213ENST00000533562 ORMDL2Q53FV1 153 aa7.63□□□□□ -1.19
CAPRIN1-213ENST00000533562 Q8N8P6 123 aa7.63□□□□□ -1.19
CAPRIN1-213ENST00000533562 VCX2Q9H322 139 aa7.63□□□□□ -1.19
CAPRIN1-213ENST00000533562 CYSLTR1Q9Y271 337 aa7.63□□□□□ -1.19
CAPRIN1-213ENST00000533562 LRP2P98164 4655 aa7.62□□□□□ -1.19
CAPRIN1-213ENST00000533562 K7EMI3 77 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms