RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
NXF1-216ENST00000533499 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
NXF1-216ENST00000533499 HERVK_113P61574 105 aa11.29□□□□□ -0.6
NXF1-216ENST00000533499 IGLV5-39A0A0G2JS06 123 aa11.27□□□□□ -0.61
NXF1-216ENST00000533499 F8WDY8 70 aa11.27□□□□□ -0.61
NXF1-216ENST00000533499 DNAH5Q8TE73 4624 aa11.27□□□□□ -0.61
NXF1-216ENST00000533499 ATOH7Q8N100 152 aa11.26□□□□□ -0.61
NXF1-216ENST00000533499 DPH3Q96FX2 82 aa11.26□□□□□ -0.61
NXF1-216ENST00000533499 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
NXF1-216ENST00000533499 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
NXF1-216ENST00000533499 CXCL5P42830 114 aa11.25□□□□□ -0.61
NXF1-216ENST00000533499 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
NXF1-216ENST00000533499 SCGB1D1O95968 90 aa11.24□□□□□ -0.61
NXF1-216ENST00000533499 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
NXF1-216ENST00000533499 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
NXF1-216ENST00000533499 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
NXF1-216ENST00000533499 PKHD1P08F94 4074 aa11.23□□□□□ -0.61
NXF1-216ENST00000533499 TRBV30A0A0K0K1B3 111 aa11.23□□□□□ -0.61
NXF1-216ENST00000533499 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
NXF1-216ENST00000533499 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
NXF1-216ENST00000533499 STPG4Q8N801 248 aa11.23□□□□□ -0.61
NXF1-216ENST00000533499 ZNF625Q96I27 306 aaPredicted RBP11.23□□□□□ -0.61
NXF1-216ENST00000533499 LEPROTO15243 131 aa11.22□□□□□ -0.61
NXF1-216ENST00000533499 CHTF8P0CG12 524 aa11.22□□□□□ -0.61
NXF1-216ENST00000533499 HAMPP81172 84 aa11.22□□□□□ -0.61
NXF1-216ENST00000533499 PLEKHB2Q96CS7 222 aa11.22□□□□□ -0.61
NXF1-216ENST00000533499 PKIGQ9Y2B9 76 aa11.22□□□□□ -0.61
NXF1-216ENST00000533499 LGALS3P17931 250 aaKnown RBP11.21□□□□□ -0.61
NXF1-216ENST00000533499 RNF151Q2KHN1 245 aa11.21□□□□□ -0.61
NXF1-216ENST00000533499 A0A096LNI7 61 aa11.2□□□□□ -0.62
NXF1-216ENST00000533499 AKR1D1P51857 326 aa11.2□□□□□ -0.62
NXF1-216ENST00000533499 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
NXF1-216ENST00000533499 FAM30AQ9NZY2 134 aa11.2□□□□□ -0.62
NXF1-216ENST00000533499 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
NXF1-216ENST00000533499 J3QQQ9 107 aa11.19□□□□□ -0.62
NXF1-216ENST00000533499 PFN2P35080 140 aa11.19□□□□□ -0.62
NXF1-216ENST00000533499 TSPEAR-AS2P59090 65 aa11.19□□□□□ -0.62
NXF1-216ENST00000533499 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
NXF1-216ENST00000533499 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
NXF1-216ENST00000533499 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
NXF1-216ENST00000533499 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
NXF1-216ENST00000533499 E9PLD3 99 aa11.17□□□□□ -0.62
NXF1-216ENST00000533499 LRP1BQ9NZR2 4599 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 BIRC6Q9NR09 4857 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 HSBP1L1C9JCN9 74 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 PANO1I0J062 215 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 PTTG1IPP53801 180 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 SFTA2Q6UW10 78 aa11.16□□□□□ -0.62
NXF1-216ENST00000533499 NDUFC2-KCTD14E9PQ53 114 aa11.15□□□□□ -0.62
NXF1-216ENST00000533499 NMUP48645 174 aa11.15□□□□□ -0.62
NXF1-216ENST00000533499 ANKRD39Q53RE8 183 aa11.15□□□□□ -0.62
NXF1-216ENST00000533499 Q6ZRP5 223 aa11.15□□□□□ -0.62
NXF1-216ENST00000533499 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
NXF1-216ENST00000533499 LINC00158P58513 81 aa11.14□□□□□ -0.63
NXF1-216ENST00000533499 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
NXF1-216ENST00000533499 TLX1NBP0CAT3 122 aa11.13□□□□□ -0.63
NXF1-216ENST00000533499 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
NXF1-216ENST00000533499 LINC00474Q9P2X8 69 aa11.13□□□□□ -0.63
NXF1-216ENST00000533499 HERV-K104P63124 156 aa11.12□□□□□ -0.63
NXF1-216ENST00000533499 Q6ZSA8 131 aa11.12□□□□□ -0.63
NXF1-216ENST00000533499 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
NXF1-216ENST00000533499 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
NXF1-216ENST00000533499 A0A087WYN8 130 aa11.11□□□□□ -0.63
NXF1-216ENST00000533499 SMIM13P0DJ93 91 aa11.11□□□□□ -0.63
NXF1-216ENST00000533499 TTTY13Q9BZ97 58 aa11.11□□□□□ -0.63
NXF1-216ENST00000533499 ZNF815PA8K554 130 aa11.1□□□□□ -0.63
NXF1-216ENST00000533499 XGP55808 180 aa11.1□□□□□ -0.63
NXF1-216ENST00000533499 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
NXF1-216ENST00000533499 DNAH8Q96JB1 4490 aa11.09□□□□□ -0.63
NXF1-216ENST00000533499 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
NXF1-216ENST00000533499 JOSD1Q15040 202 aaPredicted RBP11.09□□□□□ -0.63
NXF1-216ENST00000533499 FAM19A5Q7Z5A7 132 aaPredicted RBP11.08□□□□□ -0.64
NXF1-216ENST00000533499 FAM168BA1KXE4 195 aa11.07□□□□□ -0.64
NXF1-216ENST00000533499 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
NXF1-216ENST00000533499 SMR3BP02814 79 aaPredicted RBP11.07□□□□□ -0.64
NXF1-216ENST00000533499 CIRBPQ14011 172 aaKnown RBP11.07□□□□□ -0.64
NXF1-216ENST00000533499 COX17Q14061 63 aa11.07□□□□□ -0.64
NXF1-216ENST00000533499 C9orf129Q5T035 196 aaKnown RBP11.07□□□□□ -0.64
NXF1-216ENST00000533499 PCP2Q8IVA1 136 aa11.06□□□□□ -0.64
NXF1-216ENST00000533499 A0A0J9YXY3 114 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 MIR7-3HGQ8N6C7 128 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 DAND5Q8N907 189 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 VAMP8Q9BV40 100 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 SND1-IT1Q9HBX3 110 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
NXF1-216ENST00000533499 APOBP04114 4563 aaKnown RBP11.04□□□□□ -0.64
NXF1-216ENST00000533499 PLAC8Q9NZF1 115 aa11.04□□□□□ -0.64
NXF1-216ENST00000533499 PYY3Q5JQD4 70 aa11.03□□□□□ -0.64
NXF1-216ENST00000533499 KIAA1109Q2LD37 5005 aa11.03□□□□□ -0.64
NXF1-216ENST00000533499 SPATA45Q537H7 98 aa11.02□□□□□ -0.65
NXF1-216ENST00000533499 RYR1P21817 5038 aa11.02□□□□□ -0.65
NXF1-216ENST00000533499 NPC2P61916 151 aa11.01□□□□□ -0.65
NXF1-216ENST00000533499 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
NXF1-216ENST00000533499 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
NXF1-216ENST00000533499 M0QXV9 152 aa10.99□□□□□ -0.65
NXF1-216ENST00000533499 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms