RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
SF3B2-213ENST00000533421 TOMM7Q9P0U1 55 aa7.78□□□□□ -1.16
SF3B2-213ENST00000533421 IGKV2-24A0A0C4DH68 120 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 LINC01549A6NIU2 74 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 KRTAP29-1A8MX34 341 aaPredicted RBP7.77□□□□□ -1.17
SF3B2-213ENST00000533421 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 C2orf82Q6UX34 121 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 C2orf48Q96LS8 159 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
SF3B2-213ENST00000533421 LOC107984640A0A0U1RRK4 108 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 TINCRA0A1B0GVN0 87 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 OXTP01178 125 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 HERVK_113P63121 156 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
SF3B2-213ENST00000533421 LEPROTL1O95214 131 aa7.75□□□□□ -1.17
SF3B2-213ENST00000533421 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
SF3B2-213ENST00000533421 STPG4Q8N801 248 aa7.75□□□□□ -1.17
SF3B2-213ENST00000533421 PACRGQ96M98 296 aaPredicted RBP7.75□□□□□ -1.17
SF3B2-213ENST00000533421 CHTOPQ9Y3Y2 248 aaKnown RBP7.75□□□□□ -1.17
SF3B2-213ENST00000533421 A0A096LNI7 61 aa7.74□□□□□ -1.17
SF3B2-213ENST00000533421 SMIM1B2RUZ4 78 aa7.74□□□□□ -1.17
SF3B2-213ENST00000533421 IGLC3P0DOY3 106 aa7.74□□□□□ -1.17
SF3B2-213ENST00000533421 ZNF22P17026 224 aaPredicted RBP7.74□□□□□ -1.17
SF3B2-213ENST00000533421 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
SF3B2-213ENST00000533421 SEC11AP67812 179 aa7.74□□□□□ -1.17
SF3B2-213ENST00000533421 PMCHL2Q9BQD1 86 aa7.74□□□□□ -1.17
SF3B2-213ENST00000533421 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
SF3B2-213ENST00000533421 IGLV5-45A0A087WSX0 123 aa7.73□□□□□ -1.17
SF3B2-213ENST00000533421 RNF151Q2KHN1 245 aa7.73□□□□□ -1.17
SF3B2-213ENST00000533421 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
SF3B2-213ENST00000533421 C6orf48Q9UBA6 75 aa7.73□□□□□ -1.17
SF3B2-213ENST00000533421 NDUFA1O15239 70 aa7.72□□□□□ -1.17
SF3B2-213ENST00000533421 PRSS2P07478 247 aa7.72□□□□□ -1.17
SF3B2-213ENST00000533421 PTTG1IPP53801 180 aa7.72□□□□□ -1.17
SF3B2-213ENST00000533421 RPL18AQ02543 176 aaKnown RBP7.71□□□□□ -1.18
SF3B2-213ENST00000533421 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 ODF1Q14990 250 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 COX7B2Q8TF08 81 aa7.71□□□□□ -1.18
SF3B2-213ENST00000533421 TRAV12-1A0A0B4J245 112 aa7.7□□□□□ -1.18
SF3B2-213ENST00000533421 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
SF3B2-213ENST00000533421 F8VRH5 84 aa7.69□□□□□ -1.18
SF3B2-213ENST00000533421 H3BRM9 83 aa7.69□□□□□ -1.18
SF3B2-213ENST00000533421 CKS1BP61024 79 aa7.69□□□□□ -1.18
SF3B2-213ENST00000533421 Q8IZM0 81 aa7.69□□□□□ -1.18
SF3B2-213ENST00000533421 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
SF3B2-213ENST00000533421 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
SF3B2-213ENST00000533421 Q6ZRP5 223 aa7.67□□□□□ -1.18
SF3B2-213ENST00000533421 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
SF3B2-213ENST00000533421 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
SF3B2-213ENST00000533421 IGLV5-39A0A0G2JS06 123 aa7.66□□□□□ -1.18
SF3B2-213ENST00000533421 TRBV30A0A0K0K1B3 111 aa7.66□□□□□ -1.18
SF3B2-213ENST00000533421 TMEM223A0PJW6 202 aa7.66□□□□□ -1.18
SF3B2-213ENST00000533421 PRR3P79522 188 aaKnown RBP7.66□□□□□ -1.18
SF3B2-213ENST00000533421 SERTAD4-AS1Q5TG53 156 aa7.66□□□□□ -1.18
SF3B2-213ENST00000533421 ZNF625Q96I27 306 aaPredicted RBP7.66□□□□□ -1.18
SF3B2-213ENST00000533421 FAM168BA1KXE4 195 aa7.65□□□□□ -1.18
SF3B2-213ENST00000533421 SYS1-DBNDD2H3BUS1 97 aa7.65□□□□□ -1.18
SF3B2-213ENST00000533421 TLX1NBP0CAT3 122 aa7.65□□□□□ -1.18
SF3B2-213ENST00000533421 KRTDAPP60985 99 aa7.65□□□□□ -1.18
SF3B2-213ENST00000533421 A0A1W2PNN7 141 aa7.64□□□□□ -1.19
SF3B2-213ENST00000533421 DPM2O94777 84 aa7.64□□□□□ -1.19
SF3B2-213ENST00000533421 C3orf79P0CE67 100 aa7.64□□□□□ -1.19
SF3B2-213ENST00000533421 HNRNPA3P51991 378 aaKnown RBP7.64□□□□□ -1.19
SF3B2-213ENST00000533421 UBR4Q5T4S7 5183 aa7.63□□□□□ -1.19
SF3B2-213ENST00000533421 IGKCP01834 107 aa7.63□□□□□ -1.19
SF3B2-213ENST00000533421 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
SF3B2-213ENST00000533421 HIST3H2BBQ8N257 126 aa7.63□□□□□ -1.19
SF3B2-213ENST00000533421 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
SF3B2-213ENST00000533421 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
SF3B2-213ENST00000533421 NDUFC2-KCTD14E9PQ53 114 aa7.62□□□□□ -1.19
SF3B2-213ENST00000533421 CXCL5P42830 114 aa7.62□□□□□ -1.19
SF3B2-213ENST00000533421 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
SF3B2-213ENST00000533421 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
SF3B2-213ENST00000533421 PLNP26678 52 aa7.61□□□□□ -1.19
SF3B2-213ENST00000533421 PFN2P35080 140 aa7.61□□□□□ -1.19
SF3B2-213ENST00000533421 SNRPEP62304 92 aaKnown RBP7.61□□□□□ -1.19
SF3B2-213ENST00000533421 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
SF3B2-213ENST00000533421 FAM19A5Q7Z5A7 132 aaPredicted RBP7.61□□□□□ -1.19
SF3B2-213ENST00000533421 A0A0U1RRA0 63 aa7.6□□□□□ -1.19
SF3B2-213ENST00000533421 S100A6P06703 90 aa7.6□□□□□ -1.19
SF3B2-213ENST00000533421 PHF5AQ7RTV0 110 aaKnown RBP7.6□□□□□ -1.19
SF3B2-213ENST00000533421 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
SF3B2-213ENST00000533421 ATOH7Q8N100 152 aa7.6□□□□□ -1.19
SF3B2-213ENST00000533421 HIST1H2BLQ99880 126 aa7.6□□□□□ -1.19
SF3B2-213ENST00000533421 S100A2P29034 98 aa7.59□□□□□ -1.19
SF3B2-213ENST00000533421 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
SF3B2-213ENST00000533421 PET117Q6UWS5 81 aa7.59□□□□□ -1.19
SF3B2-213ENST00000533421 LEPROTO15243 131 aa7.57□□□□□ -1.2
SF3B2-213ENST00000533421 ERG28Q9UKR5 140 aa7.57□□□□□ -1.2
SF3B2-213ENST00000533421 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
SF3B2-213ENST00000533421 HMCN2Q8NDA2 5059 aa7.57□□□□□ -1.2
SF3B2-213ENST00000533421 UBE2BP63146 152 aa7.56□□□□□ -1.2
SF3B2-213ENST00000533421 C1orf137Q5JT78 98 aa7.56□□□□□ -1.2
SF3B2-213ENST00000533421 KRTAP11-1Q8IUC1 163 aa7.56□□□□□ -1.2
SF3B2-213ENST00000533421 NDUFA12Q9UI09 145 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms