RNA–Protein interactions for RNA: ENST00000533179.1

SOX9-AS1-211, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 460 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-211ENST00000533179 HCP5Q6MZN7 132 aa4.39□□□□□ -1.71
SOX9-AS1-211ENST00000533179 LINC00322Q6ZN03 302 aaPredicted RBP4.39□□□□□ -1.71
SOX9-AS1-211ENST00000533179 DNAJC13O75165 2243 aa4.39□□□□□ -1.71
SOX9-AS1-211ENST00000533179 SPINK7P58062 85 aa4.38□□□□□ -1.71
SOX9-AS1-211ENST00000533179 DEFB134Q4QY38 66 aa4.38□□□□□ -1.71
SOX9-AS1-211ENST00000533179 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
SOX9-AS1-211ENST00000533179 PATE1Q8WXA2 126 aa4.38□□□□□ -1.71
SOX9-AS1-211ENST00000533179 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
SOX9-AS1-211ENST00000533179 ESPL1Q14674 2120 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 CEP350Q5VT06 3117 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 H0YGG7 62 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 IGKV3-20P01619 116 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 SPATA8Q6RVD6 105 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 ST20-AS1Q8NBB2 130 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 C4orf3Q8WVX3 66 aa4.37□□□□□ -1.71
SOX9-AS1-211ENST00000533179 KIF26BQ2KJY2 2108 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 PRRC2BQ5JSZ5 2229 aaKnown RBP4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 ZFHX3Q15911 3703 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 SPTY2D1-AS1A0A0U1RR47 76 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 H0YGX0 51 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 IGLV3-19P01714 112 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 DEFB110Q30KQ9 67 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 BRCA2P51587 3418 aa4.36□□□□□ -1.71
SOX9-AS1-211ENST00000533179 CPSF4LA6NMK7 179 aaKnown RBP4.35□□□□□ -1.71
SOX9-AS1-211ENST00000533179 NDPQ00604 133 aa4.35□□□□□ -1.71
SOX9-AS1-211ENST00000533179 DEFB133Q30KQ1 61 aa4.35□□□□□ -1.71
SOX9-AS1-211ENST00000533179 GAFA1Q96PS6 74 aa4.35□□□□□ -1.71
SOX9-AS1-211ENST00000533179 COL4A2P08572 1712 aa4.35□□□□□ -1.71
SOX9-AS1-211ENST00000533179 A0A1W2PNU3 283 aaPredicted RBP4.34□□□□□ -1.71
SOX9-AS1-211ENST00000533179 MRGPRG-AS1Q2M3A8 158 aa4.34□□□□□ -1.71
SOX9-AS1-211ENST00000533179 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
SOX9-AS1-211ENST00000533179 LOC110117498A0A087WWA1 95 aa4.33□□□□□ -1.72
SOX9-AS1-211ENST00000533179 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
SOX9-AS1-211ENST00000533179 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
SOX9-AS1-211ENST00000533179 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
SOX9-AS1-211ENST00000533179 PRRC2AP48634 2157 aaKnown RBP4.32□□□□□ -1.72
SOX9-AS1-211ENST00000533179 NDUFA4O00483 81 aa4.32□□□□□ -1.72
SOX9-AS1-211ENST00000533179 TFF3Q07654 80 aa4.32□□□□□ -1.72
SOX9-AS1-211ENST00000533179 TRGV4A0A0C4DH28 118 aa4.31□□□□□ -1.72
SOX9-AS1-211ENST00000533179 KRTAP9-7A8MTY7 169 aa4.31□□□□□ -1.72
SOX9-AS1-211ENST00000533179 ZNF861PO60384 105 aa4.31□□□□□ -1.72
SOX9-AS1-211ENST00000533179 PRO3102Q9H379 93 aa4.31□□□□□ -1.72
SOX9-AS1-211ENST00000533179 DEFB112Q30KQ8 113 aa4.3□□□□□ -1.72
SOX9-AS1-211ENST00000533179 DEFB123Q8N688 67 aa4.3□□□□□ -1.72
SOX9-AS1-211ENST00000533179 FAM168BA1KXE4 195 aa4.29□□□□□ -1.72
SOX9-AS1-211ENST00000533179 IAPPP10997 89 aa4.29□□□□□ -1.72
SOX9-AS1-211ENST00000533179 RNASE3P12724 160 aaKnown RBP4.29□□□□□ -1.72
SOX9-AS1-211ENST00000533179 HAMPP81172 84 aa4.28□□□□□ -1.72
SOX9-AS1-211ENST00000533179 KRTAP24-1Q3LI83 254 aa4.28□□□□□ -1.72
SOX9-AS1-211ENST00000533179 COA5Q86WW8 74 aa4.28□□□□□ -1.72
SOX9-AS1-211ENST00000533179 ARHGAP5-AS1Q96IT6 56 aa4.28□□□□□ -1.72
SOX9-AS1-211ENST00000533179 DOCK10Q96BY6 2186 aa4.28□□□□□ -1.72
SOX9-AS1-211ENST00000533179 CHD9Q3L8U1 2897 aa4.28□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGKV3-15P01624 115 aa4.27□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGLV3-1P01715 115 aa4.27□□□□□ -1.73
SOX9-AS1-211ENST00000533179 COX17Q14061 63 aa4.27□□□□□ -1.73
SOX9-AS1-211ENST00000533179 CHD7Q9P2D1 2997 aa4.27□□□□□ -1.73
SOX9-AS1-211ENST00000533179 GOLGA4Q13439 2230 aaKnown RBP4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 A0A0J9YWU9 116 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 TYMSOSQ8TAI1 123 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 KCNQ1DNQ9H478 68 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 MKI67P46013 3256 aaKnown RBP4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 SPAG17Q6Q759 2223 aa4.26□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGLV4-69A0A075B6H9 119 aa4.25□□□□□ -1.73
SOX9-AS1-211ENST00000533179 A0A087WTM6 91 aa4.25□□□□□ -1.73
SOX9-AS1-211ENST00000533179 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
SOX9-AS1-211ENST00000533179 NUP214P35658 2090 aaPredicted RBP4.25□□□□□ -1.73
SOX9-AS1-211ENST00000533179 CEP192Q8TEP8 1941 aa4.25□□□□□ -1.73
SOX9-AS1-211ENST00000533179 CUL9Q8IWT3 2517 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 LINC00959A0A1B0GUT2 108 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 NCR3O14931 201 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 FXYD4P59646 89 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 CNFNQ9BYD5 112 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 TTTY10Q9BZA0 68 aa4.24□□□□□ -1.73
SOX9-AS1-211ENST00000533179 FREM1Q5H8C1 2179 aa4.23□□□□□ -1.73
SOX9-AS1-211ENST00000533179 TRGV2A0A075B6R0 118 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGKV2-40A0A087WW87 121 aaPredicted RBP4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 TRBV6-4A0A1B0GX49 114 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGKV2D-40P01614 121 aaPredicted RBP4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 IGKV4-1P06312 121 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 LINC01590Q5TEZ4 76 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 Q6ZTI0 123 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 SMIM2Q9BVW6 85 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 TRANK1O15050 2925 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 PDE4DIPQ5VU43 2346 aa4.22□□□□□ -1.73
SOX9-AS1-211ENST00000533179 U3KQA8 63 aa4.21□□□□□ -1.74
SOX9-AS1-211ENST00000533179 CACNA1DQ01668 2161 aa4.21□□□□□ -1.74
SOX9-AS1-211ENST00000533179 LAMA2P24043 3122 aaKnown RBP4.21□□□□□ -1.74
SOX9-AS1-211ENST00000533179 SPINK14Q6IE38 97 aa4.2□□□□□ -1.74
SOX9-AS1-211ENST00000533179 C5orf42Q9H799 3197 aa4.2□□□□□ -1.74
SOX9-AS1-211ENST00000533179 COL27A1Q8IZC6 1860 aaPredicted RBP4.2□□□□□ -1.74
SOX9-AS1-211ENST00000533179 REV3LO60673 3130 aa4.19□□□□□ -1.74
SOX9-AS1-211ENST00000533179 NBDYA0A0U1RRE5 68 aa4.19□□□□□ -1.74
SOX9-AS1-211ENST00000533179 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms