RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 S100A2P29034 98 aa8.35□□□□□ -1.07
TRAPPC4-212ENST00000533058 HAMPP81172 84 aa8.35□□□□□ -1.07
TRAPPC4-212ENST00000533058 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
TRAPPC4-212ENST00000533058 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
TRAPPC4-212ENST00000533058 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 F8VRH5 84 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 SLPIP03973 132 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 ZNF22P17026 224 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
TRAPPC4-212ENST00000533058 SMIM1B2RUZ4 78 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 KRTDAPP60985 99 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 CKS1BP61024 79 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 ODF1Q14990 250 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 C6orf226Q5I0X4 101 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 PMCHL2Q9BQD1 86 aa8.33□□□□□ -1.08
TRAPPC4-212ENST00000533058 NDUFA1O15239 70 aa8.32□□□□□ -1.08
TRAPPC4-212ENST00000533058 SDIM1Q6ZPB5 146 aa8.32□□□□□ -1.08
TRAPPC4-212ENST00000533058 Q6ZRU5 148 aa8.32□□□□□ -1.08
TRAPPC4-212ENST00000533058 F8WDY8 70 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 DPM2O94777 84 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 PLNP26678 52 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 CIRBP-AS1Q8TBR5 109 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 SRRM2Q9UQ35 2752 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-212ENST00000533058 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 KIAA0087Q14695 138 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 C2orf82Q6UX34 121 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 Q8IZM0 81 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 HIST3H2BBQ8N257 126 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
TRAPPC4-212ENST00000533058 IGKCP01834 107 aa8.29□□□□□ -1.08
TRAPPC4-212ENST00000533058 C3orf79P0CE67 100 aa8.29□□□□□ -1.08
TRAPPC4-212ENST00000533058 CIRBPQ14011 172 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-212ENST00000533058 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
TRAPPC4-212ENST00000533058 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
TRAPPC4-212ENST00000533058 C20orf202A1L168 122 aa8.28□□□□□ -1.08
TRAPPC4-212ENST00000533058 CXCL5P42830 114 aa8.28□□□□□ -1.08
TRAPPC4-212ENST00000533058 C10orf25Q5T742 122 aa8.28□□□□□ -1.08
TRAPPC4-212ENST00000533058 IGKV2-24A0A0C4DH68 120 aa8.27□□□□□ -1.09
TRAPPC4-212ENST00000533058 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
TRAPPC4-212ENST00000533058 HERVK_113P61574 105 aa8.27□□□□□ -1.09
TRAPPC4-212ENST00000533058 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-212ENST00000533058 HIST1H2BLQ99880 126 aa8.27□□□□□ -1.09
TRAPPC4-212ENST00000533058 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 LOC107984640A0A0U1RRK4 108 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 LINC01545Q5VT33 79 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC4-212ENST00000533058 RNF151Q2KHN1 245 aa8.25□□□□□ -1.09
TRAPPC4-212ENST00000533058 C5orf52A6NGY3 159 aa8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 CHTF8P0CG12 524 aa8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 MAJINQ3KP22 176 aa8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 C9orf116Q5BN46 136 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC4-212ENST00000533058 A0A096LNI7 61 aa8.23□□□□□ -1.09
TRAPPC4-212ENST00000533058 PANO1I0J062 215 aa8.23□□□□□ -1.09
TRAPPC4-212ENST00000533058 GHRHP01286 108 aa8.23□□□□□ -1.09
TRAPPC4-212ENST00000533058 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
TRAPPC4-212ENST00000533058 GAGE2EQ4V326 116 aa8.22□□□□□ -1.09
TRAPPC4-212ENST00000533058 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
TRAPPC4-212ENST00000533058 LINC00474Q9P2X8 69 aa8.22□□□□□ -1.09
TRAPPC4-212ENST00000533058 GAGE2DQ9UEU5 116 aa8.22□□□□□ -1.09
TRAPPC4-212ENST00000533058 LEPROTO15243 131 aa8.21□□□□□ -1.1
TRAPPC4-212ENST00000533058 LGALS3P17931 250 aaKnown RBP8.21□□□□□ -1.1
TRAPPC4-212ENST00000533058 PTTG1IPP53801 180 aa8.21□□□□□ -1.1
TRAPPC4-212ENST00000533058 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
TRAPPC4-212ENST00000533058 ZNF625Q96I27 306 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-212ENST00000533058 DMBT1Q9UGM3 2413 aaPredicted RBP8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 NDUFC2-KCTD14E9PQ53 114 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 AKR1D1P51857 326 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 SFTA2Q6UW10 78 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 STPG4Q8N801 248 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
TRAPPC4-212ENST00000533058 A0A087WYN8 130 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 J3QQQ9 107 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 SCGB1D1O95968 90 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 TLX1NBP0CAT3 122 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 PFN2P35080 140 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 Q6ZRP5 223 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
TRAPPC4-212ENST00000533058 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
TRAPPC4-212ENST00000533058 RPL37AP61513 92 aaKnown RBP8.18□□□□□ -1.1
TRAPPC4-212ENST00000533058 MEIG1Q5JSS6 88 aa8.18□□□□□ -1.1
TRAPPC4-212ENST00000533058 HERC1Q15751 4861 aa8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 E9PLD3 99 aa8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 TSPEAR-AS2P59090 65 aa8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 HERV-K104P63124 156 aa8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
TRAPPC4-212ENST00000533058 A0A0U1RRA0 63 aa8.16□□□□□ -1.1
TRAPPC4-212ENST00000533058 LINC00158P58513 81 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms