RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 Q6ZRU5 148 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 LINC00173Q6ZV60 143 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 ERASQ7Z444 233 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 PKIGQ9Y2B9 76 aa9.75□□□□□ -0.85
CPSF1-210ENST00000532935 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
CPSF1-210ENST00000532935 HERC1Q15751 4861 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 A0A096LNI7 61 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 IGIPA6NJ69 53 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
CPSF1-210ENST00000532935 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 C2orf48Q96LS8 159 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 SCGB3A1Q96QR1 104 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 AMELXQ99217 191 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
CPSF1-210ENST00000532935 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 UBE2D1P51668 147 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 TIMM17AQ99595 171 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 VCX2Q9H322 139 aa9.73□□□□□ -0.85
CPSF1-210ENST00000532935 FAT3Q8TDW7 4589 aa9.72□□□□□ -0.85
CPSF1-210ENST00000532935 TSTD3H0UI37 97 aa9.72□□□□□ -0.85
CPSF1-210ENST00000532935 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
CPSF1-210ENST00000532935 A0A087WZ39 114 aa9.71□□□□□ -0.86
CPSF1-210ENST00000532935 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.86
CPSF1-210ENST00000532935 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
CPSF1-210ENST00000532935 STPG4Q8N801 248 aa9.71□□□□□ -0.86
CPSF1-210ENST00000532935 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.86
CPSF1-210ENST00000532935 HSBP1L1C9JCN9 74 aa9.69□□□□□ -0.86
CPSF1-210ENST00000532935 F8WDY8 70 aa9.69□□□□□ -0.86
CPSF1-210ENST00000532935 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
CPSF1-210ENST00000532935 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
CPSF1-210ENST00000532935 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
CPSF1-210ENST00000532935 ODF1Q14990 250 aa9.68□□□□□ -0.86
CPSF1-210ENST00000532935 RNF151Q2KHN1 245 aa9.68□□□□□ -0.86
CPSF1-210ENST00000532935 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
CPSF1-210ENST00000532935 NDUFA1O15239 70 aa9.67□□□□□ -0.86
CPSF1-210ENST00000532935 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
CPSF1-210ENST00000532935 C7orf33Q8WU49 177 aa9.67□□□□□ -0.86
CPSF1-210ENST00000532935 MRPL35Q9NZE8 188 aaKnown RBP9.67□□□□□ -0.86
CPSF1-210ENST00000532935 H0Y8G0 127 aa9.66□□□□□ -0.86
CPSF1-210ENST00000532935 PLNP26678 52 aa9.66□□□□□ -0.86
CPSF1-210ENST00000532935 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
CPSF1-210ENST00000532935 PMVKQ15126 192 aa9.66□□□□□ -0.86
CPSF1-210ENST00000532935 C10orf25Q5T742 122 aa9.66□□□□□ -0.86
CPSF1-210ENST00000532935 F8VRH5 84 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 DPM2O94777 84 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
CPSF1-210ENST00000532935 SEC11AP67812 179 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 RPL18AQ02543 176 aaKnown RBP9.65□□□□□ -0.86
CPSF1-210ENST00000532935 SPATA45Q537H7 98 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 PAM16Q9Y3D7 125 aa9.65□□□□□ -0.86
CPSF1-210ENST00000532935 IGKCP01834 107 aa9.64□□□□□ -0.87
CPSF1-210ENST00000532935 HERVK_113P63121 156 aa9.64□□□□□ -0.87
CPSF1-210ENST00000532935 C6orf48Q9UBA6 75 aa9.64□□□□□ -0.87
CPSF1-210ENST00000532935 CHTOPQ9Y3Y2 248 aaKnown RBP9.64□□□□□ -0.87
CPSF1-210ENST00000532935 KRTAP29-1A8MX34 341 aaPredicted RBP9.63□□□□□ -0.87
CPSF1-210ENST00000532935 ATOH7Q8N100 152 aa9.63□□□□□ -0.87
CPSF1-210ENST00000532935 CST9LQ9H4G1 147 aa9.63□□□□□ -0.87
CPSF1-210ENST00000532935 GEMIN7Q9H840 131 aaKnown RBP9.63□□□□□ -0.87
CPSF1-210ENST00000532935 J3QL48 77 aa9.62□□□□□ -0.87
CPSF1-210ENST00000532935 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
CPSF1-210ENST00000532935 CDKN2A-AS1Q9UH64 79 aa9.62□□□□□ -0.87
CPSF1-210ENST00000532935 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 PCP4L1A6NKN8 68 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 PRSS2P07478 247 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 TLX1NBP0CAT3 122 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 C2orf82Q6UX34 121 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 PMCHL2Q9BQD1 86 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 PRO1933Q9H354 126 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 TOMM7Q9P0U1 55 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 UQCR10Q9UDW1 63 aa9.61□□□□□ -0.87
CPSF1-210ENST00000532935 TRBV30A0A0K0K1B3 111 aa9.6□□□□□ -0.87
CPSF1-210ENST00000532935 TINCRA0A1B0GVN0 87 aa9.6□□□□□ -0.87
CPSF1-210ENST00000532935 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
CPSF1-210ENST00000532935 DDTP30046 118 aa9.6□□□□□ -0.87
CPSF1-210ENST00000532935 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-210ENST00000532935 Q6ZRP5 223 aa9.6□□□□□ -0.87
CPSF1-210ENST00000532935 PRR3P79522 188 aaKnown RBP9.59□□□□□ -0.87
CPSF1-210ENST00000532935 Q8IZM0 81 aa9.59□□□□□ -0.87
CPSF1-210ENST00000532935 LINC00469Q8N7U9 141 aa9.59□□□□□ -0.87
CPSF1-210ENST00000532935 OXTP01178 125 aa9.58□□□□□ -0.88
CPSF1-210ENST00000532935 C6orf226Q5I0X4 101 aa9.58□□□□□ -0.88
CPSF1-210ENST00000532935 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
CPSF1-210ENST00000532935 DLEU1O43261 78 aa9.57□□□□□ -0.88
CPSF1-210ENST00000532935 CKS1BP61024 79 aa9.57□□□□□ -0.88
CPSF1-210ENST00000532935 GAGE2EQ4V326 116 aa9.57□□□□□ -0.88
CPSF1-210ENST00000532935 GAGE2DQ9UEU5 116 aa9.57□□□□□ -0.88
CPSF1-210ENST00000532935 SMIM1B2RUZ4 78 aa9.56□□□□□ -0.88
CPSF1-210ENST00000532935 COX8AP10176 69 aa9.56□□□□□ -0.88
CPSF1-210ENST00000532935 C11orf86A6NJI1 115 aa9.55□□□□□ -0.88
CPSF1-210ENST00000532935 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
CPSF1-210ENST00000532935 HERVK_113P61574 105 aa9.55□□□□□ -0.88
CPSF1-210ENST00000532935 SLC25A34Q6PIV7 304 aa9.55□□□□□ -0.88
CPSF1-210ENST00000532935 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
CPSF1-210ENST00000532935 ANKRD39Q53RE8 183 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms