RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, human

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-209	ENST00000532347	DEFA3	P59666	94 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	UBE2G2	P60604	165 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	C9orf116	Q5BN46	136 aa	Predicted RBP	4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	C1orf137	Q5JT78	98 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	C9orf62	Q8N4C0	152 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	NUP35	Q8NFH5	326 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	IMMP2L	Q96T52	175 aa		4.16	□□□□□ -1.74
KNL1-209	ENST00000532347	TRBV6-5	A0A0K0K1A5	114 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	C19orf71	A6NCJ1	209 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	C1orf196	B1AJZ1	125 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347		G3V3Q6	166 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	MGP	P08493	103 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	RAB5C	P51148	216 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	TPRXL	Q17RH7	258 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	OR10D4P	Q8NGN7	298 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	KRTAP4-3	Q9BYR4	195 aa		4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	MRPL35	Q9NZE8	188 aa	Known RBP	4.15	□□□□□ -1.75
KNL1-209	ENST00000532347	COX7A2L	O14548	114 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	TMEM241	Q24JQ0	296 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	SMIM15	Q7Z3B0	74 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	OR2D3	Q8NGH3	330 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	MBD3L1	Q8WWY6	194 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	LINC00526	Q96FQ7	95 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347	MRAP2	Q96G30	205 aa		4.14	□□□□□ -1.75
KNL1-209	ENST00000532347		A0A1W2PNN7	141 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.13	□□□□□ -1.75
KNL1-209	ENST00000532347		I3L3M4	83 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	XCL1	P47992	114 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	MEF2B	Q02080	365 aa	Predicted RBP	4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	RPL7L1	Q6DKI1	246 aa	Known RBP	4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	CAMK2N2	Q96S95	79 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	MANBAL	Q9NQG1	85 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	CDC42SE2	Q9NRR3	84 aa		4.13	□□□□□ -1.75
KNL1-209	ENST00000532347	TRBV27	A0A0K0K1C4	114 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	SDHAF1	A6NFY7	115 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	TCAP	O15273	167 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	NUPR1	O60356	82 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	PPP1R17	O96001	155 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	IFNA1	P01562	189 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	CCL20	P78556	96 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	TIMM21	Q9BVV7	248 aa		4.12	□□□□□ -1.75
KNL1-209	ENST00000532347	RPL35	P42766	123 aa	Known RBP	4.11	□□□□□ -1.75
KNL1-209	ENST00000532347	GATD1	Q8NB37	220 aa		4.11	□□□□□ -1.75
KNL1-209	ENST00000532347	IGKV3OR2-268	A0A0C4DH90	116 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	C7orf77	A4D0Y5	90 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	RAB19	A4D1S5	217 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	TEX46	H3BTG2	121 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	NDUFA1	O15239	70 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	PDE6D	O43924	150 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	ZNF345	Q14585	488 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	C5orf47	Q569G3	176 aa		4.1	□□□□□ -1.75
KNL1-209	ENST00000532347	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	TRBV30	A0A0K0K1B3	111 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	MUC21	A0A140T8X8	626 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	BCL2	P10415	239 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	PMCH	P20382	165 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	GNG4	P50150	75 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	RPL18A	Q02543	176 aa	Known RBP	4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	MOBP	Q13875	183 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	CENPW	Q5EE01	88 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347		Q5W150	140 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	LYZL1	Q6UWQ5	148 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	PHF5A	Q7RTV0	110 aa	Known RBP	4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	KCNRG	Q8N5I3	272 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	SFT2D1	Q8WV19	159 aa		4.09	□□□□□ -1.75
KNL1-209	ENST00000532347	CRYGA	P11844	174 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	POLR2K	P53803	58 aa	Known RBP	4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	FOXA3	P55318	350 aa	Predicted RBP	4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	IFITM3	Q01628	133 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	SPAG11B	Q08648	103 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	FAM229B	Q4G0N7	80 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	LCE3D	Q9BYE3	92 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	SMDT1	Q9H4I9	107 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	ST20	Q9HBF5	79 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	TP73-AS1	Q9UF72	201 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347	CRCT1	Q9UGL9	99 aa		4.08	□□□□□ -1.76
KNL1-209	ENST00000532347		M0QXV9	152 aa		4.07	□□□□□ -1.76
KNL1-209	ENST00000532347	RPL28	P46779	137 aa	Known RBP	4.07	□□□□□ -1.76
KNL1-209	ENST00000532347	ALG5	Q9Y673	324 aa		4.07	□□□□□ -1.76
KNL1-209	ENST00000532347	FXYD6-FXYD2	A0A087WZ82	144 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347		A8MWL6	223 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	NDUFC2-KCTD14	E9PQ53	114 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	UBE2B	P63146	152 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	FP248	Q71RG6	208 aa	Predicted RBP	4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	UBE2D4	Q9Y2X8	147 aa		4.06	□□□□□ -1.76
KNL1-209	ENST00000532347	MRPS36	P82909	103 aa	Known RBP	4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	FAM231D	Q6ZW35	169 aa		4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	FAM213B	Q8TBF2	198 aa		4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	BORCS7	Q96B45	105 aa		4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	RPL39L	Q96EH5	51 aa	Known RBP	4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	TMEM191A	Q9H0A3	160 aa		4.05	□□□□□ -1.76
KNL1-209	ENST00000532347	TRBV20OR9-2	A0A075B6H5	130 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	TMEM223	A0PJW6	202 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	HMSD	A8MTL9	139 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	SPAG11A	Q6PDA7	123 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	ORAOV1	Q8WV07	137 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	SPANXA1	Q9NS26	97 aa		4.04	□□□□□ -1.76
KNL1-209	ENST00000532347	LINC00862	A6NCI5	91 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms