RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, human

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-222	ENST00000531551	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551		Q6ZRU5	148 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	C10orf25	Q5T742	122 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	PLEKHB2	Q96CS7	222 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	CARD19	Q96LW7	228 aa		11.49	□□□□□ -0.57
CTSB-222	ENST00000531551	LOC105371267	A0A1B0GV96	52 aa		11.48	□□□□□ -0.57
CTSB-222	ENST00000531551		J3QQQ9	107 aa		11.48	□□□□□ -0.57
CTSB-222	ENST00000531551	LGALS3	P17931	250 aa	Known RBP	11.48	□□□□□ -0.57
CTSB-222	ENST00000531551	TSPEAR-AS2	P59090	65 aa		11.48	□□□□□ -0.57
CTSB-222	ENST00000531551	DNAH5	Q8TE73	4624 aa		11.48	□□□□□ -0.57
CTSB-222	ENST00000531551	CXCL5	P42830	114 aa		11.47	□□□□□ -0.57
CTSB-222	ENST00000531551	NMU	P48645	174 aa		11.47	□□□□□ -0.57
CTSB-222	ENST00000531551	CNBP	P62633	177 aa	Known RBP	11.47	□□□□□ -0.57
CTSB-222	ENST00000531551	HECTD4	Q9Y4D8	3996 aa		11.47	□□□□□ -0.57
CTSB-222	ENST00000531551	IGKV2D-26	A0A0A0MRZ7	120 aa		11.46	□□□□□ -0.57
CTSB-222	ENST00000531551	LINC01620	Q4KN68	170 aa		11.46	□□□□□ -0.57
CTSB-222	ENST00000531551	ZNF625	Q96I27	306 aa	Predicted RBP	11.46	□□□□□ -0.58
CTSB-222	ENST00000531551	PGPEP1	Q9NXJ5	209 aa		11.46	□□□□□ -0.58
CTSB-222	ENST00000531551	NDUFA12	Q9UI09	145 aa		11.45	□□□□□ -0.58
CTSB-222	ENST00000531551		A0A1B0GVY2	172 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551		F8WDY8	70 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	CDPF1	Q6NVV7	123 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	C6orf48	Q9UBA6	75 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	PAM16	Q9Y3D7	125 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	C9orf116	Q5BN46	136 aa	Predicted RBP	11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	VAMP8	Q9BV40	100 aa		11.44	□□□□□ -0.58
CTSB-222	ENST00000531551	TTTY13	Q9BZ97	58 aa		11.43	□□□□□ -0.58
CTSB-222	ENST00000531551	C9orf163	Q8N9P6	203 aa		11.42	□□□□□ -0.58
CTSB-222	ENST00000531551	TRBV30	A0A0K0K1B3	111 aa		11.42	□□□□□ -0.58
CTSB-222	ENST00000531551	MYMX	A0A1B0GTQ4	84 aa		11.42	□□□□□ -0.58
CTSB-222	ENST00000531551	SPATA45	Q537H7	98 aa		11.41	□□□□□ -0.58
CTSB-222	ENST00000531551	SFTA2	Q6UW10	78 aa		11.41	□□□□□ -0.58
CTSB-222	ENST00000531551	ZNF815P	A8K554	130 aa		11.4	□□□□□ -0.59
CTSB-222	ENST00000531551	PCP2	Q8IVA1	136 aa		11.4	□□□□□ -0.59
CTSB-222	ENST00000531551	GCSH	P23434	173 aa		11.39	□□□□□ -0.59
CTSB-222	ENST00000531551	PFN2	P35080	140 aa		11.39	□□□□□ -0.59
CTSB-222	ENST00000531551	MEIG1	Q5JSS6	88 aa		11.39	□□□□□ -0.59
CTSB-222	ENST00000531551	PKHD1	P08F94	4074 aa		11.39	□□□□□ -0.59
CTSB-222	ENST00000531551		A0A0U1RRA0	63 aa		11.38	□□□□□ -0.59
CTSB-222	ENST00000531551	HERV-K104	P63124	156 aa		11.38	□□□□□ -0.59
CTSB-222	ENST00000531551	RPL18A	Q02543	176 aa	Known RBP	11.38	□□□□□ -0.59
CTSB-222	ENST00000531551	RNF151	Q2KHN1	245 aa		11.38	□□□□□ -0.59
CTSB-222	ENST00000531551	C16orf90	A8MZG2	172 aa		11.38	□□□□□ -0.59
CTSB-222	ENST00000531551	S100A12	P80511	92 aa		11.37	□□□□□ -0.59
CTSB-222	ENST00000531551	ERG28	Q9UKR5	140 aa		11.37	□□□□□ -0.59
CTSB-222	ENST00000531551	GAGE2B	Q13066	116 aa		11.36	□□□□□ -0.59
CTSB-222	ENST00000531551	LOC107984640	A0A0U1RRK4	108 aa		11.36	□□□□□ -0.59
CTSB-222	ENST00000531551	LINC00158	P58513	81 aa		11.36	□□□□□ -0.59
CTSB-222	ENST00000531551	DYNC1H1	Q14204	4646 aa	Known RBP	11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	SMIM6	P0DI80	62 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	SMIM13	P0DJ93	91 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	GAGE2E	Q4V326	116 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	SCGB1D4	Q6XE38	83 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	SDIM1	Q6ZPB5	146 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	C14orf144	Q96I85	54 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	GAGE2D	Q9UEU5	116 aa		11.35	□□□□□ -0.59
CTSB-222	ENST00000531551	IGKV2-24	A0A0C4DH68	120 aa		11.34	□□□□□ -0.59
CTSB-222	ENST00000531551		A0A0J9YXY3	114 aa		11.34	□□□□□ -0.59
CTSB-222	ENST00000531551	NDUFC2-KCTD14	E9PQ53	114 aa		11.34	□□□□□ -0.59
CTSB-222	ENST00000531551	LRP1B	Q9NZR2	4599 aa		11.34	□□□□□ -0.59
CTSB-222	ENST00000531551		Q6ZRP5	223 aa		11.34	□□□□□ -0.59
CTSB-222	ENST00000531551	EPPK1	P58107	5090 aa	Known RBP	11.33	□□□□□ -0.6
CTSB-222	ENST00000531551	KRTAP10-1	P60331	282 aa		11.33	□□□□□ -0.6
CTSB-222	ENST00000531551	TP73-AS1	Q9UF72	201 aa		11.33	□□□□□ -0.6
CTSB-222	ENST00000531551		A0A096LNI7	61 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	LINC00587	B1AMM8	73 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	PKIG	Q9Y2B9	76 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	TLX1NB	P0CAT3	122 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	CHTF8	P0CG12	524 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	COX8A	P10176	69 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	CIRBP	Q14011	172 aa	Known RBP	11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	COX17	Q14061	63 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	DPH3	Q96FX2	82 aa		11.32	□□□□□ -0.6
CTSB-222	ENST00000531551	DAND5	Q8N907	189 aa		11.3	□□□□□ -0.6
CTSB-222	ENST00000531551	XAGE1A	Q9HD64	81 aa		11.3	□□□□□ -0.6
CTSB-222	ENST00000531551	PTTG1IP	P53801	180 aa		11.29	□□□□□ -0.6
CTSB-222	ENST00000531551	DNAH8	Q96JB1	4490 aa		11.29	□□□□□ -0.6
CTSB-222	ENST00000531551	BOD1L2	Q8IYS8	172 aa		11.29	□□□□□ -0.6
CTSB-222	ENST00000531551	MIR7-3HG	Q8N6C7	128 aa		11.29	□□□□□ -0.6
CTSB-222	ENST00000531551	C12orf57	Q99622	126 aa		11.28	□□□□□ -0.6
CTSB-222	ENST00000531551	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.28	□□□□□ -0.6
CTSB-222	ENST00000531551	PANO1	I0J062	215 aa		11.27	□□□□□ -0.6
CTSB-222	ENST00000531551	SLC25A34	Q6PIV7	304 aa		11.27	□□□□□ -0.6
CTSB-222	ENST00000531551	FAM30A	Q9NZY2	134 aa		11.27	□□□□□ -0.61
CTSB-222	ENST00000531551	NPC2	P61916	151 aa		11.26	□□□□□ -0.61
CTSB-222	ENST00000531551	ADAMTSL4-AS1	Q5T5F5	129 aa		11.26	□□□□□ -0.61
CTSB-222	ENST00000531551	SND1-IT1	Q9HBX3	110 aa		11.26	□□□□□ -0.61
CTSB-222	ENST00000531551	LINC00474	Q9P2X8	69 aa		11.25	□□□□□ -0.61
CTSB-222	ENST00000531551	TMEM238	C9JI98	176 aa		11.25	□□□□□ -0.61
CTSB-222	ENST00000531551	C9orf129	Q5T035	196 aa	Known RBP	11.25	□□□□□ -0.61
CTSB-222	ENST00000531551	DLEU1	O43261	78 aa		11.24	□□□□□ -0.61
CTSB-222	ENST00000531551	TIMM17B	O60830	172 aa		11.24	□□□□□ -0.61
CTSB-222	ENST00000531551	LITAF	Q99732	161 aa		11.24	□□□□□ -0.61
CTSB-222	ENST00000531551	PRO1933	Q9H354	126 aa		11.24	□□□□□ -0.61
CTSB-222	ENST00000531551	SPACA4	Q8TDM5	124 aa		11.23	□□□□□ -0.61
CTSB-222	ENST00000531551	CTAG1A	P78358	180 aa		11.23	□□□□□ -0.61
CTSB-222	ENST00000531551	HAMP	P81172	84 aa		11.23	□□□□□ -0.61
CTSB-222	ENST00000531551	MIEN1	Q9BRT3	115 aa		11.23	□□□□□ -0.61
CTSB-222	ENST00000531551	FAM168B	A1KXE4	195 aa		11.22	□□□□□ -0.61
CTSB-222	ENST00000531551	LINC00518	Q8N0U6	118 aa		11.21	□□□□□ -0.61

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