RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
TM9SF1-211ENST00000531406 IGKV2-24A0A0C4DH68 120 aa8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 LOC105371267A0A1B0GV96 52 aa8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 FOXI1Q12951 378 aa8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 RNASE13Q5GAN3 156 aaKnown RBP8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 AMELXQ99217 191 aa8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 OPRPNQ99935 248 aaPredicted RBP8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 CHTOPQ9Y3Y2 248 aaKnown RBP8.05□□□□□ -1.12
TM9SF1-211ENST00000531406 F8VRH5 84 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 SCGB1D1O95968 90 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 PLNP26678 52 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 SEC11AP67812 179 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 LINC01545Q5VT33 79 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 STPG4Q8N801 248 aa8.04□□□□□ -1.12
TM9SF1-211ENST00000531406 PRR3P79522 188 aaKnown RBP8.03□□□□□ -1.12
TM9SF1-211ENST00000531406 ODF1Q14990 250 aa8.03□□□□□ -1.12
TM9SF1-211ENST00000531406 A0A096LNI7 61 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 TRAV13-1A0A0B4J241 112 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 CCL25O15444 150 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 DPM2O94777 84 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 XCL1P47992 114 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 JOSD1Q15040 202 aaPredicted RBP8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 SS18Q15532 418 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC01600Q96MT4 127 aa8.02□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC00959A0A1B0GUT2 108 aa8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 IGKCP01834 107 aa8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 UBE2D1P51668 147 aa8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 ZC2HC1BQ5TFG8 222 aa8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 GEMIN7Q9H840 131 aaKnown RBP8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
TM9SF1-211ENST00000531406 IGHV1-58A0A0C4DH39 117 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 SMIM6P0DI80 62 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 IGLC3P0DOY3 106 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC00526Q96FQ7 95 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 PMCHL2Q9BQD1 86 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC00474Q9P2X8 69 aa8□□□□□ -1.13
TM9SF1-211ENST00000531406 IGLV4-69A0A075B6H9 119 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 A0A0J9YXV3 536 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 TINCRA0A1B0GVN0 87 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 HERVK_113P63121 156 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 FAM19A3Q7Z5A8 133 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 PKIGQ9Y2B9 76 aa7.99□□□□□ -1.13
TM9SF1-211ENST00000531406 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
TM9SF1-211ENST00000531406 H3BRM9 83 aa7.98□□□□□ -1.13
TM9SF1-211ENST00000531406 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
TM9SF1-211ENST00000531406 CARD19Q96LW7 228 aa7.98□□□□□ -1.13
TM9SF1-211ENST00000531406 C11orf86A6NJI1 115 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 HERVK_113P61574 105 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 TMEM170BQ5T4T1 132 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 CD164L2Q6UWJ8 174 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
TM9SF1-211ENST00000531406 LRP2P98164 4655 aa7.96□□□□□ -1.13
TM9SF1-211ENST00000531406 ZNF561-AS1K7EIQ3 104 aa7.96□□□□□ -1.14
TM9SF1-211ENST00000531406 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
TM9SF1-211ENST00000531406 SYCNQ0VAF6 134 aa7.96□□□□□ -1.14
TM9SF1-211ENST00000531406 ATOH7Q8N100 152 aa7.96□□□□□ -1.14
TM9SF1-211ENST00000531406 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 S100A12P80511 92 aa7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 SRSF9Q13242 221 aaKnown RBP eCLIP7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 REG3GQ6UW15 175 aa7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 VAMP8Q9BV40 100 aa7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 TNXBP22105 4242 aa7.95□□□□□ -1.14
TM9SF1-211ENST00000531406 Q6ZRP5 223 aa7.94□□□□□ -1.14
TM9SF1-211ENST00000531406 COX7A2LO14548 114 aa7.93□□□□□ -1.14
TM9SF1-211ENST00000531406 MALP21145 153 aa7.93□□□□□ -1.14
TM9SF1-211ENST00000531406 PTTG1IPP53801 180 aa7.93□□□□□ -1.14
TM9SF1-211ENST00000531406 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
TM9SF1-211ENST00000531406 APOMO95445 188 aa7.92□□□□□ -1.14
TM9SF1-211ENST00000531406 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
TM9SF1-211ENST00000531406 LINC01561Q8N1V8 128 aa7.92□□□□□ -1.14
TM9SF1-211ENST00000531406 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
TM9SF1-211ENST00000531406 A0A087WZ39 114 aa7.91□□□□□ -1.14
TM9SF1-211ENST00000531406 IGHV3OR16-9A0A0B4J2B5 98 aa7.91□□□□□ -1.14
TM9SF1-211ENST00000531406 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
TM9SF1-211ENST00000531406 TMEM223A0PJW6 202 aa7.91□□□□□ -1.14
TM9SF1-211ENST00000531406 PAM16Q9Y3D7 125 aa7.91□□□□□ -1.14
TM9SF1-211ENST00000531406 E9PLD3 99 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 SPINK8P0C7L1 97 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 SPATA45Q537H7 98 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 C12orf57Q99622 126 aa7.9□□□□□ -1.14
TM9SF1-211ENST00000531406 SMIM1B2RUZ4 78 aa7.89□□□□□ -1.15
TM9SF1-211ENST00000531406 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
TM9SF1-211ENST00000531406 CAMK2N2Q96S95 79 aa7.89□□□□□ -1.15
TM9SF1-211ENST00000531406 LEPROTO15243 131 aa7.88□□□□□ -1.15
TM9SF1-211ENST00000531406 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
TM9SF1-211ENST00000531406 NMUP48645 174 aa7.88□□□□□ -1.15
TM9SF1-211ENST00000531406 PRSS2P07478 247 aa7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 ANKRD39Q53RE8 183 aa7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 LINC00518Q8N0U6 118 aa7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 ORAOV1Q8WV07 137 aa7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 PSORS1C2Q9UIG4 136 aa7.87□□□□□ -1.15
TM9SF1-211ENST00000531406 RNF213Q63HN8 5207 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms