RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 C7orf33Q8WU49 177 aa11.91□□□□□ -0.5
UBXN1-211ENST00000531056 A0A0J9YXV3 536 aa11.9□□□□□ -0.5
UBXN1-211ENST00000531056 NDUFA1O15239 70 aa11.9□□□□□ -0.5
UBXN1-211ENST00000531056 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
UBXN1-211ENST00000531056 LINC01561Q8N1V8 128 aa11.9□□□□□ -0.5
UBXN1-211ENST00000531056 LRP1Q07954 4544 aaKnown RBP11.89□□□□□ -0.51
UBXN1-211ENST00000531056 J3QL48 77 aa11.89□□□□□ -0.51
UBXN1-211ENST00000531056 ATP5LO75964 103 aa11.89□□□□□ -0.51
UBXN1-211ENST00000531056 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
UBXN1-211ENST00000531056 LINC00310P59036 64 aa11.88□□□□□ -0.51
UBXN1-211ENST00000531056 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
UBXN1-211ENST00000531056 FAT3Q8TDW7 4589 aa11.87□□□□□ -0.51
UBXN1-211ENST00000531056 OXTP01178 125 aa11.87□□□□□ -0.51
UBXN1-211ENST00000531056 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
UBXN1-211ENST00000531056 FAM19A2Q8N3H0 131 aa11.87□□□□□ -0.51
UBXN1-211ENST00000531056 C6orf48Q9UBA6 75 aa11.87□□□□□ -0.51
UBXN1-211ENST00000531056 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
UBXN1-211ENST00000531056 PMVKQ15126 192 aa11.86□□□□□ -0.51
UBXN1-211ENST00000531056 A0A1W2PNN7 141 aa11.85□□□□□ -0.51
UBXN1-211ENST00000531056 TLX1NBP0CAT3 122 aa11.85□□□□□ -0.51
UBXN1-211ENST00000531056 SEC11AP67812 179 aa11.85□□□□□ -0.51
UBXN1-211ENST00000531056 NUPR1O60356 82 aa11.84□□□□□ -0.51
UBXN1-211ENST00000531056 HERVK_113P63121 156 aa11.84□□□□□ -0.51
UBXN1-211ENST00000531056 LEPROTL1O95214 131 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 NDUFA6P56556 154 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 C2orf82Q6UX34 121 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 CST9LQ9H4G1 147 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
UBXN1-211ENST00000531056 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
UBXN1-211ENST00000531056 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
UBXN1-211ENST00000531056 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
UBXN1-211ENST00000531056 Q6ZRP5 223 aa11.82□□□□□ -0.52
UBXN1-211ENST00000531056 GEMIN7Q9H840 131 aaKnown RBP11.81□□□□□ -0.52
UBXN1-211ENST00000531056 HSPB8Q9UJY1 196 aa11.81□□□□□ -0.52
UBXN1-211ENST00000531056 Q8IZM0 81 aa11.8□□□□□ -0.52
UBXN1-211ENST00000531056 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
UBXN1-211ENST00000531056 IGLV5-45A0A087WSX0 123 aa11.78□□□□□ -0.52
UBXN1-211ENST00000531056 PRSS2P07478 247 aa11.78□□□□□ -0.52
UBXN1-211ENST00000531056 FABP4P15090 132 aa11.78□□□□□ -0.52
UBXN1-211ENST00000531056 TOMM7Q9P0U1 55 aa11.78□□□□□ -0.52
UBXN1-211ENST00000531056 LINC00469Q8N7U9 141 aa11.77□□□□□ -0.53
UBXN1-211ENST00000531056 PACRGQ96M98 296 aaPredicted RBP11.77□□□□□ -0.53
UBXN1-211ENST00000531056 TRAV12-1A0A0B4J245 112 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 SMIM1B2RUZ4 78 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 NDUFC2-KCTD14E9PQ53 114 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 GAGE2EQ4V326 116 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 GAGE2DQ9UEU5 116 aa11.76□□□□□ -0.53
UBXN1-211ENST00000531056 IGLC3P0DOY3 106 aa11.75□□□□□ -0.53
UBXN1-211ENST00000531056 CKS1BP61024 79 aa11.75□□□□□ -0.53
UBXN1-211ENST00000531056 PHF5AQ7RTV0 110 aaKnown RBP11.75□□□□□ -0.53
UBXN1-211ENST00000531056 CHTOPQ9Y3Y2 248 aaKnown RBP11.75□□□□□ -0.53
UBXN1-211ENST00000531056 S100A6P06703 90 aa11.74□□□□□ -0.53
UBXN1-211ENST00000531056 MAP1LC3CQ9BXW4 147 aa11.74□□□□□ -0.53
UBXN1-211ENST00000531056 H0Y8G0 127 aa11.73□□□□□ -0.53
UBXN1-211ENST00000531056 MT1HL1P0DM35 61 aa11.73□□□□□ -0.53
UBXN1-211ENST00000531056 KRTAP7-1Q8IUC3 87 aa11.73□□□□□ -0.53
UBXN1-211ENST00000531056 F8VRH5 84 aa11.72□□□□□ -0.53
UBXN1-211ENST00000531056 CXCL5P42830 114 aa11.72□□□□□ -0.53
UBXN1-211ENST00000531056 C9orf129Q5T035 196 aaKnown RBP11.72□□□□□ -0.53
UBXN1-211ENST00000531056 FAM19A5Q7Z5A7 132 aaPredicted RBP11.72□□□□□ -0.53
UBXN1-211ENST00000531056 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
UBXN1-211ENST00000531056 H3BRM9 83 aa11.71□□□□□ -0.53
UBXN1-211ENST00000531056 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
UBXN1-211ENST00000531056 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
UBXN1-211ENST00000531056 SPINK6Q6UWN8 80 aa11.7□□□□□ -0.54
UBXN1-211ENST00000531056 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
UBXN1-211ENST00000531056 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
UBXN1-211ENST00000531056 ODF1Q14990 250 aa11.69□□□□□ -0.54
UBXN1-211ENST00000531056 ZNF22P17026 224 aaPredicted RBP11.68□□□□□ -0.54
UBXN1-211ENST00000531056 S100A2P29034 98 aa11.68□□□□□ -0.54
UBXN1-211ENST00000531056 KRTAP11-1Q8IUC1 163 aa11.68□□□□□ -0.54
UBXN1-211ENST00000531056 M0QXV9 152 aa11.67□□□□□ -0.54
UBXN1-211ENST00000531056 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
UBXN1-211ENST00000531056 SYS1-DBNDD2H3BUS1 97 aa11.66□□□□□ -0.54
UBXN1-211ENST00000531056 HIST3H2BBQ8N257 126 aa11.66□□□□□ -0.54
UBXN1-211ENST00000531056 PLNP26678 52 aa11.65□□□□□ -0.54
UBXN1-211ENST00000531056 C1orf137Q5JT78 98 aa11.65□□□□□ -0.54
UBXN1-211ENST00000531056 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
UBXN1-211ENST00000531056 PET117Q6UWS5 81 aa11.64□□□□□ -0.55
UBXN1-211ENST00000531056 LINC01600Q96MT4 127 aa11.64□□□□□ -0.55
UBXN1-211ENST00000531056 DPM2O94777 84 aa11.63□□□□□ -0.55
UBXN1-211ENST00000531056 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
UBXN1-211ENST00000531056 KRTDAPP60985 99 aa11.63□□□□□ -0.55
UBXN1-211ENST00000531056 SNRPEP62304 92 aaKnown RBP11.63□□□□□ -0.55
UBXN1-211ENST00000531056 SERTAD4-AS1Q5TG53 156 aa11.63□□□□□ -0.55
UBXN1-211ENST00000531056 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
UBXN1-211ENST00000531056 TNXBP22105 4242 aa11.62□□□□□ -0.55
UBXN1-211ENST00000531056 REG3GQ6UW15 175 aa11.62□□□□□ -0.55
UBXN1-211ENST00000531056 IGKCP01834 107 aa11.61□□□□□ -0.55
UBXN1-211ENST00000531056 HIST1H2BLQ99880 126 aa11.61□□□□□ -0.55
UBXN1-211ENST00000531056 PMCHL2Q9BQD1 86 aa11.61□□□□□ -0.55
UBXN1-211ENST00000531056 TMEM223A0PJW6 202 aa11.6□□□□□ -0.55
UBXN1-211ENST00000531056 C5orf52A6NGY3 159 aa11.6□□□□□ -0.55
UBXN1-211ENST00000531056 IGLV7-43P04211 117 aa11.6□□□□□ -0.55
UBXN1-211ENST00000531056 LINC01545Q5VT33 79 aa11.6□□□□□ -0.55
UBXN1-211ENST00000531056 C20orf202A1L168 122 aa11.59□□□□□ -0.55
UBXN1-211ENST00000531056 UBE2BP63146 152 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 205.7 ms