RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 C2orf88Q9BSF0 95 aa9.58□□□□□ -0.88
CPSF1-205ENST00000531042 NDUFC2-KCTD14E9PQ53 114 aa9.57□□□□□ -0.88
CPSF1-205ENST00000531042 H0Y9J4 135 aa9.57□□□□□ -0.88
CPSF1-205ENST00000531042 Q6ZN92 141 aa9.57□□□□□ -0.88
CPSF1-205ENST00000531042 PACRGQ96M98 296 aaPredicted RBP9.57□□□□□ -0.88
CPSF1-205ENST00000531042 VCX2Q9H322 139 aa9.57□□□□□ -0.88
CPSF1-205ENST00000531042 M0QXV9 152 aa9.56□□□□□ -0.88
CPSF1-205ENST00000531042 COX19Q49B96 90 aa9.56□□□□□ -0.88
CPSF1-205ENST00000531042 ORMDL2Q53FV1 153 aa9.56□□□□□ -0.88
CPSF1-205ENST00000531042 PRR26Q8N8Z3 221 aa9.56□□□□□ -0.88
CPSF1-205ENST00000531042 C5orf52A6NGY3 159 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 IGIPA6NJ69 53 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 K7EMI3 77 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 TRGC2P03986 189 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 NPSP0C0P6 89 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
CPSF1-205ENST00000531042 FAM19A3Q7Z5A8 133 aa9.55□□□□□ -0.88
CPSF1-205ENST00000531042 UBE2BP63146 152 aa9.54□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 PRSS2P07478 247 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BHQ93079 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BNQ99877 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 HIST1H2BMQ99879 126 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
CPSF1-205ENST00000531042 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
CPSF1-205ENST00000531042 CKS1BP61024 79 aa9.52□□□□□ -0.89
CPSF1-205ENST00000531042 SNRPEP62304 92 aaKnown RBP9.52□□□□□ -0.89
CPSF1-205ENST00000531042 C6orf226Q5I0X4 101 aa9.52□□□□□ -0.89
CPSF1-205ENST00000531042 Q8IZM0 81 aa9.52□□□□□ -0.89
CPSF1-205ENST00000531042 KRTAP1-4P0C5Y4 121 aa9.51□□□□□ -0.89
CPSF1-205ENST00000531042 IGLV1-50A0A075B6I6 118 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 HERVK_113P63121 156 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 SEC11AP67812 179 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 PAPPA-AS1Q5QFB9 102 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 ALKBH7Q9BT30 221 aaPredicted RBP9.5□□□□□ -0.89
CPSF1-205ENST00000531042 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
CPSF1-205ENST00000531042 LPAP08519 4548 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 G0S2P27469 103 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 COA6Q5JTJ3 125 aaKnown RBP9.49□□□□□ -0.89
CPSF1-205ENST00000531042 TIMM17AQ99595 171 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
CPSF1-205ENST00000531042 TOMM6Q96B49 74 aa9.48□□□□□ -0.89
CPSF1-205ENST00000531042 NDUFA6P56556 154 aa9.47□□□□□ -0.89
CPSF1-205ENST00000531042 KIAA1644Q3SXP7 199 aa9.47□□□□□ -0.89
CPSF1-205ENST00000531042 GEMIN7Q9H840 131 aaKnown RBP9.47□□□□□ -0.89
CPSF1-205ENST00000531042 XAGE1AQ9HD64 81 aa9.47□□□□□ -0.89
CPSF1-205ENST00000531042 C22orf24Q9Y442 160 aa9.47□□□□□ -0.89
CPSF1-205ENST00000531042 F8VRH5 84 aa9.46□□□□□ -0.9
CPSF1-205ENST00000531042 ERASQ7Z444 233 aa9.46□□□□□ -0.9
CPSF1-205ENST00000531042 ZNF861PO60384 105 aa9.45□□□□□ -0.9
CPSF1-205ENST00000531042 AKR1D1P51857 326 aa9.45□□□□□ -0.9
CPSF1-205ENST00000531042 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
CPSF1-205ENST00000531042 NUPR1O60356 82 aa9.44□□□□□ -0.9
CPSF1-205ENST00000531042 CXCL5P42830 114 aa9.44□□□□□ -0.9
CPSF1-205ENST00000531042 LBHQ53QV2 105 aaPredicted RBP9.44□□□□□ -0.9
CPSF1-205ENST00000531042 HIST3H2BBQ8N257 126 aa9.44□□□□□ -0.9
CPSF1-205ENST00000531042 SCGB3A1Q96QR1 104 aa9.44□□□□□ -0.9
CPSF1-205ENST00000531042 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
CPSF1-205ENST00000531042 SMIM6P0DI80 62 aa9.43□□□□□ -0.9
CPSF1-205ENST00000531042 RPL13AP40429 203 aaKnown RBP9.43□□□□□ -0.9
CPSF1-205ENST00000531042 TP73-AS1Q9UF72 201 aa9.43□□□□□ -0.9
CPSF1-205ENST00000531042 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
CPSF1-205ENST00000531042 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CPSF1-205ENST00000531042 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
CPSF1-205ENST00000531042 S100A2P29034 98 aa9.41□□□□□ -0.9
CPSF1-205ENST00000531042 PDZD11Q5EBL8 140 aa9.41□□□□□ -0.9
CPSF1-205ENST00000531042 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
CPSF1-205ENST00000531042 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
CPSF1-205ENST00000531042 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
CPSF1-205ENST00000531042 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
CPSF1-205ENST00000531042 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
CPSF1-205ENST00000531042 LINC00167Q96N53 147 aa9.38□□□□□ -0.91
CPSF1-205ENST00000531042 BCE1O60756 84 aa9.37□□□□□ -0.91
CPSF1-205ENST00000531042 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
CPSF1-205ENST00000531042 PMVKQ15126 192 aa9.37□□□□□ -0.91
CPSF1-205ENST00000531042 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
CPSF1-205ENST00000531042 RPL28P46779 137 aaKnown RBP9.36□□□□□ -0.91
CPSF1-205ENST00000531042 C12orf57Q99622 126 aa9.36□□□□□ -0.91
CPSF1-205ENST00000531042 RPL37AP8A6NKH3 93 aa9.35□□□□□ -0.91
CPSF1-205ENST00000531042 FABP4P15090 132 aa9.35□□□□□ -0.91
CPSF1-205ENST00000531042 PRR4Q16378 134 aa9.35□□□□□ -0.91
CPSF1-205ENST00000531042 IGLV5-37A0A075B6J1 123 aa9.34□□□□□ -0.91
CPSF1-205ENST00000531042 FA2HQ7L5A8 372 aa9.34□□□□□ -0.91
CPSF1-205ENST00000531042 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
CPSF1-205ENST00000531042 A0A087X002 238 aa9.33□□□□□ -0.92
CPSF1-205ENST00000531042 GAGE10A6NGK3 116 aa9.33□□□□□ -0.92
CPSF1-205ENST00000531042 H3BRM9 83 aa9.32□□□□□ -0.92
CPSF1-205ENST00000531042 SERF1AO75920 110 aa9.32□□□□□ -0.92
CPSF1-205ENST00000531042 LINC00310P59036 64 aa9.31□□□□□ -0.92
CPSF1-205ENST00000531042 NKAPP1Q8N9T2 125 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 268.9 ms