RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.13■□□□□ 0.17
ME3-209ENST00000530520 CNBPP62633 177 aaKnown RBP16.13■□□□□ 0.17
ME3-209ENST00000530520 UNQ6190/PRO20217Q6UXQ8 127 aa16.13■□□□□ 0.17
ME3-209ENST00000530520 Q6ZRU5 148 aa16.13■□□□□ 0.17
ME3-209ENST00000530520 CARD19Q96LW7 228 aa16.13■□□□□ 0.17
ME3-209ENST00000530520 IGKV2D-26A0A0A0MRZ7 120 aa16.12■□□□□ 0.17
ME3-209ENST00000530520 NMUP48645 174 aa16.12■□□□□ 0.17
ME3-209ENST00000530520 FUSP35637 526 aaKnown RBP eCLIP16.11■□□□□ 0.17
ME3-209ENST00000530520 VAMP8Q9BV40 100 aa16.11■□□□□ 0.17
ME3-209ENST00000530520 C10orf25Q5T742 122 aa16.1■□□□□ 0.17
ME3-209ENST00000530520 NDUFA12Q9UI09 145 aa16.1■□□□□ 0.17
ME3-209ENST00000530520 IGLV5-52A0A0A0MRZ9 124 aa16.09■□□□□ 0.17
ME3-209ENST00000530520 CDPF1Q6NVV7 123 aa16.09■□□□□ 0.17
ME3-209ENST00000530520 KRTAP10-2P60368 255 aa16.09■□□□□ 0.17
ME3-209ENST00000530520 PAM16Q9Y3D7 125 aa16.09■□□□□ 0.17
ME3-209ENST00000530520 SFTA2Q6UW10 78 aa16.08■□□□□ 0.16
ME3-209ENST00000530520 ZNF625Q96I27 306 aaPredicted RBP16.07■□□□□ 0.16
ME3-209ENST00000530520 C6orf48Q9UBA6 75 aa16.07■□□□□ 0.16
ME3-209ENST00000530520 FAT2Q9NYQ8 4349 aa16.07■□□□□ 0.16
ME3-209ENST00000530520 MYMXA0A1B0GTQ4 84 aa16.06■□□□□ 0.16
ME3-209ENST00000530520 PGPEP1Q9NXJ5 209 aa16.06■□□□□ 0.16
ME3-209ENST00000530520 TRBV30A0A0K0K1B3 111 aa16.05■□□□□ 0.16
ME3-209ENST00000530520 A0A1B0GVY2 172 aa16.05■□□□□ 0.16
ME3-209ENST00000530520 SPATA45Q537H7 98 aa16.05■□□□□ 0.16
ME3-209ENST00000530520 TTTY13Q9BZ97 58 aa16.05■□□□□ 0.16
ME3-209ENST00000530520 SMIM6P0DI80 62 aa16.04■□□□□ 0.16
ME3-209ENST00000530520 ZNF815PA8K554 130 aa16.03■□□□□ 0.16
ME3-209ENST00000530520 C9orf163Q8N9P6 203 aa16.03■□□□□ 0.16
ME3-209ENST00000530520 HERV-K104P63124 156 aa16.02■□□□□ 0.16
ME3-209ENST00000530520 RNF151Q2KHN1 245 aa16.02■□□□□ 0.16
ME3-209ENST00000530520 LINC01620Q4KN68 170 aa16.02■□□□□ 0.16
ME3-209ENST00000530520 C9orf116Q5BN46 136 aaPredicted RBP16.02■□□□□ 0.16
ME3-209ENST00000530520 S100A12P80511 92 aa16.01■□□□□ 0.15
ME3-209ENST00000530520 PCP2Q8IVA1 136 aa16.01■□□□□ 0.15
ME3-209ENST00000530520 MEIG1Q5JSS6 88 aa15.99■□□□□ 0.15
ME3-209ENST00000530520 ERG28Q9UKR5 140 aa15.98■□□□□ 0.15
ME3-209ENST00000530520 PKD1P98161 4303 aa15.97■□□□□ 0.15
ME3-209ENST00000530520 PFN2P35080 140 aa15.96■□□□□ 0.15
ME3-209ENST00000530520 LOC107984640A0A0U1RRK4 108 aa15.96■□□□□ 0.14
ME3-209ENST00000530520 DNAH11Q96DT5 4516 aa15.95■□□□□ 0.14
ME3-209ENST00000530520 A0A0J9YXY3 114 aa15.95■□□□□ 0.14
ME3-209ENST00000530520 GCSHP23434 173 aa15.95■□□□□ 0.14
ME3-209ENST00000530520 RPL18AQ02543 176 aaKnown RBP15.95■□□□□ 0.14
ME3-209ENST00000530520 PKIGQ9Y2B9 76 aa15.95■□□□□ 0.14
ME3-209ENST00000530520 COX8AP10176 69 aa15.94■□□□□ 0.14
ME3-209ENST00000530520 SCGB1D4Q6XE38 83 aa15.94■□□□□ 0.14
ME3-209ENST00000530520 C14orf144Q96I85 54 aa15.94■□□□□ 0.14
ME3-209ENST00000530520 A0A0U1RRA0 63 aa15.93■□□□□ 0.14
ME3-209ENST00000530520 LINC00587B1AMM8 73 aa15.93■□□□□ 0.14
ME3-209ENST00000530520 NDUFC2-KCTD14E9PQ53 114 aa15.93■□□□□ 0.14
ME3-209ENST00000530520 HECTD4Q9Y4D8 3996 aa15.93■□□□□ 0.14
ME3-209ENST00000530520 TLX1NBP0CAT3 122 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 SMIM13P0DJ93 91 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 LINC00158P58513 81 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 COX17Q14061 63 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 SDIM1Q6ZPB5 146 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 C16orf90A8MZG2 172 aa15.92■□□□□ 0.14
ME3-209ENST00000530520 Q6ZRP5 223 aa15.91■□□□□ 0.14
ME3-209ENST00000530520 TP73-AS1Q9UF72 201 aa15.91■□□□□ 0.14
ME3-209ENST00000530520 GAGE2BQ13066 116 aa15.9■□□□□ 0.14
ME3-209ENST00000530520 CIRBPQ14011 172 aaKnown RBP15.9■□□□□ 0.14
ME3-209ENST00000530520 GAGE2EQ4V326 116 aa15.9■□□□□ 0.14
ME3-209ENST00000530520 BOD1L2Q8IYS8 172 aa15.9■□□□□ 0.14
ME3-209ENST00000530520 GAGE2DQ9UEU5 116 aa15.9■□□□□ 0.14
ME3-209ENST00000530520 C12orf57Q99622 126 aa15.89■□□□□ 0.13
ME3-209ENST00000530520 A0A096LNI7 61 aa15.88■□□□□ 0.13
ME3-209ENST00000530520 IGKV2-24A0A0C4DH68 120 aa15.88■□□□□ 0.13
ME3-209ENST00000530520 SLC25A34Q6PIV7 304 aa15.87■□□□□ 0.13
ME3-209ENST00000530520 PTTG1IPP53801 180 aa15.87■□□□□ 0.13
ME3-209ENST00000530520 DLEU1O43261 78 aa15.86■□□□□ 0.13
ME3-209ENST00000530520 KRTAP10-1P60331 282 aa15.86■□□□□ 0.13
ME3-209ENST00000530520 TIMM17BO60830 172 aa15.85■□□□□ 0.13
ME3-209ENST00000530520 CHTF8P0CG12 524 aa15.85■□□□□ 0.13
ME3-209ENST00000530520 MIR7-3HGQ8N6C7 128 aa15.85■□□□□ 0.13
ME3-209ENST00000530520 DAND5Q8N907 189 aa15.84■□□□□ 0.13
ME3-209ENST00000530520 XAGE1AQ9HD64 81 aa15.83■□□□□ 0.13
ME3-209ENST00000530520 TMEM238C9JI98 176 aa15.83■□□□□ 0.12
ME3-209ENST00000530520 ADAMTSL4-AS1Q5T5F5 129 aa15.83■□□□□ 0.12
ME3-209ENST00000530520 LITAFQ99732 161 aa15.83■□□□□ 0.12
ME3-209ENST00000530520 SND1-IT1Q9HBX3 110 aa15.82■□□□□ 0.12
ME3-209ENST00000530520 LINC00474Q9P2X8 69 aa15.82■□□□□ 0.12
ME3-209ENST00000530520 LINC00518Q8N0U6 118 aa15.81■□□□□ 0.12
ME3-209ENST00000530520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.81■□□□□ 0.12
ME3-209ENST00000530520 DNAH5Q8TE73 4624 aa15.8■□□□□ 0.12
ME3-209ENST00000530520 DPH3Q96FX2 82 aa15.79■□□□□ 0.12
ME3-209ENST00000530520 PRO1933Q9H354 126 aa15.79■□□□□ 0.12
ME3-209ENST00000530520 PKHD1P08F94 4074 aa15.79■□□□□ 0.12
ME3-209ENST00000530520 PANO1I0J062 215 aa15.79■□□□□ 0.12
ME3-209ENST00000530520 C9orf129Q5T035 196 aaKnown RBP15.79■□□□□ 0.12
ME3-209ENST00000530520 UQCR10Q9UDW1 63 aa15.79■□□□□ 0.12
ME3-209ENST00000530520 SPACA4Q8TDM5 124 aa15.78■□□□□ 0.12
ME3-209ENST00000530520 NPC2P61916 151 aa15.77■□□□□ 0.11
ME3-209ENST00000530520 MIEN1Q9BRT3 115 aa15.77■□□□□ 0.11
ME3-209ENST00000530520 SPANXDQ9BXN6 97 aa15.76■□□□□ 0.11
ME3-209ENST00000530520 SPANXCQ9NY87 97 aa15.76■□□□□ 0.11
ME3-209ENST00000530520 FAM30AQ9NZY2 134 aa15.76■□□□□ 0.11
ME3-209ENST00000530520 SRSF9Q13242 221 aaKnown RBP eCLIP15.75■□□□□ 0.11
ME3-209ENST00000530520 Q6ZSA8 131 aa15.75■□□□□ 0.11
ME3-209ENST00000530520 C2orf91Q6ZV80 131 aa15.75■□□□□ 0.11
ME3-209ENST00000530520 SPANXB1Q9NS25 103 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms